About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Khoe-San whole genome sequencing

High-coverage (>30X) whole genome data (FASTQ) for 25 southern African Khoe-San individuals (from five populations). These are the same individuals as in Schlebusch et al. 2020 (EGAD00001006183), but different data.

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Khoe-San Project Data Access Agreement 2

The data is available for academic research use, subject to signing a Data Access Agreement (available at the URL below). The data cannot be used for commercial purposes or applications.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000001072 Whole Genome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000384285 fastq.gz 17.5 GB
EGAF50000384286 fastq.gz 18.7 GB
EGAF50000384287 fastq.gz 31.9 GB
EGAF50000384288 fastq.gz 35.9 GB
EGAF50000384289 fastq.gz 35.7 GB
EGAF50000384290 fastq.gz 38.9 GB
EGAF50000384291 fastq.gz 45.8 GB
EGAF50000384292 fastq.gz 49.7 GB
EGAF50000384293 fastq.gz 43.9 GB
EGAF50000384294 fastq.gz 47.4 GB
EGAF50000384295 fastq.gz 40.7 GB
EGAF50000384296 fastq.gz 39.0 GB
EGAF50000384297 fastq.gz 55.3 GB
EGAF50000384298 fastq.gz 57.2 GB
EGAF50000384299 fastq.gz 56.9 GB
EGAF50000384300 fastq.gz 62.9 GB
EGAF50000384301 fastq.gz 44.1 GB
EGAF50000384302 fastq.gz 47.3 GB
EGAF50000384303 fastq.gz 42.1 GB
EGAF50000384304 fastq.gz 45.6 GB
EGAF50000384305 fastq.gz 41.4 GB
EGAF50000384306 fastq.gz 44.8 GB
EGAF50000384307 fastq.gz 50.9 GB
EGAF50000384308 fastq.gz 54.9 GB
EGAF50000384309 fastq.gz 44.5 GB
EGAF50000384310 fastq.gz 47.3 GB
EGAF50000384311 fastq.gz 43.3 GB
EGAF50000384312 fastq.gz 45.5 GB
EGAF50000384313 fastq.gz 40.1 GB
EGAF50000384314 fastq.gz 41.4 GB
EGAF50000384315 fastq.gz 54.2 GB
EGAF50000384316 fastq.gz 56.8 GB
EGAF50000384317 fastq.gz 45.2 GB
EGAF50000384318 fastq.gz 46.8 GB
EGAF50000384319 fastq.gz 43.0 GB
EGAF50000384320 fastq.gz 42.6 GB
EGAF50000384321 fastq.gz 47.8 GB
EGAF50000384322 fastq.gz 50.4 GB
EGAF50000384323 fastq.gz 43.1 GB
EGAF50000384324 fastq.gz 43.3 GB
EGAF50000384325 fastq.gz 46.9 GB
EGAF50000384326 fastq.gz 48.4 GB
EGAF50000384327 fastq.gz 43.5 GB
EGAF50000384328 fastq.gz 44.8 GB
EGAF50000384329 fastq.gz 41.0 GB
EGAF50000384330 fastq.gz 42.7 GB
EGAF50000384331 fastq.gz 53.0 GB
EGAF50000384332 fastq.gz 55.4 GB
EGAF50000384333 fastq.gz 40.6 GB
EGAF50000384334 fastq.gz 41.7 GB
EGAF50000384433 txt 1.1 kB
51 Files (2.2 TB)