About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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10X single cell sequencing of HNT34 cocultured with Tcells with or without antibody targeting SLAMF6

This dataset contains fastq-files from single cell 5' RNA sequencing of the AML cell line HNT34 and normal T cells following co-culture with and without an antibody blocking SLAMF6 (TNC-1). The libraries were prepared using 10X GEM-X Universal 5' Gene Expression v3 Reagent Kit. In total, the dataset contains sequenced gene expression libraries from four samples (HNT34 co-cultured with T cells from two different donors; for both donors there is one sample with and one sample without the blocking antibody).

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To request access to these data, please contact request@researchdata.lu.se. Lund University will assess each request based on Swedish laws and regulations.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000001085 RNASeq

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000381149 fastq.gz 12.1 GB
Federated EGA
EGAF50000381150 fastq.gz 30.4 GB
Federated EGA
EGAF50000381151 fastq.gz 13.1 GB
Federated EGA
EGAF50000381152 fastq.gz 34.0 GB
Federated EGA
EGAF50000381153 fastq.gz 11.9 GB
Federated EGA
EGAF50000381154 fastq.gz 30.0 GB
Federated EGA
EGAF50000381155 fastq.gz 12.4 GB
Federated EGA
EGAF50000381156 fastq.gz 31.6 GB
Federated EGA
8 Files (175.5 GB)