About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Spatial transcriptomics prostate cancer

Spatial transcriptomic characterization of human fresh frozen prostate cancer and non-malignant regions from the same patient. 100 micron thick sections were made from the biopsies, adjacent to snRNA sequencing, and subjected to 10x Genomics Visium ST analysis.

Request Access

Data policy of Data Access Committee of UZ Leuven

The procedure described below always applies to re-use transfer of genomic or genetic data that are in an external database. This external database can be the European Genome-phenome Archive (EGA). When a researcher receives requests for reuse of data, or when the database requires an intervention of a data access committee, the DAC will assess these requests for reuse and transfer of genomic or genetic data by third parties. Patient consent to research participation (ICF) and compatibility with new data processing should be checked. An application should be submitted at dac@uzleuven.be. So applications for re-use of genomic/genomic data go through the DAC. In the first place, DAC performs a front desk function here. An application form should be completed by the applicant. To begin with, the DAC employee then checks the ICF and its compatibility with further use. The DAC employee also ensures that a check is made with the competent services to ensure that there are no legal impediments. If i) there are possible commercial interests (commercial use of the data by the recipient or the requesting party is a commercial party), ii) the researcher does not agree, or iii) there is some ambiguity about potential risks of the data transfer (e.g. violation (GDPR) legislation, identity of recipient party, use of the data), the question is referred to the DAC advisory board.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000001143 Transcriptome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000402988 fastq.gz 1.7 GB
EGAF50000402989 fastq.gz 1.5 GB
EGAF50000402990 fastq.gz 3.2 GB
EGAF50000402991 fastq.gz 3.1 GB
EGAF50000402992 fastq.gz 1.5 GB
EGAF50000402993 fastq.gz 3.3 GB
EGAF50000402994 fastq.gz 4.8 GB
EGAF50000402995 fastq.gz 1.6 GB
EGAF50000402996 fastq.gz 3.5 GB
EGAF50000402997 fastq.gz 1.3 GB
EGAF50000402998 fastq.gz 1.8 GB
EGAF50000402999 fastq.gz 1.8 GB
EGAF50000403000 fastq.gz 5.1 GB
EGAF50000403001 fastq.gz 6.8 GB
EGAF50000403002 fastq.gz 2.3 GB
EGAF50000403003 fastq.gz 2.2 GB
EGAF50000403004 fastq.gz 5.6 GB
EGAF50000403005 fastq.gz 1.8 GB
EGAF50000403006 fastq.gz 3.5 GB
EGAF50000403007 fastq.gz 1.6 GB
EGAF50000403008 fastq.gz 2.9 GB
EGAF50000403009 fastq.gz 1.3 GB
EGAF50000403010 fastq.gz 5.0 GB
EGAF50000403011 fastq.gz 3.6 GB
EGAF50000403012 fastq.gz 2.3 GB
EGAF50000403013 fastq.gz 2.6 GB
EGAF50000403024 fastq.gz 4.0 GB
EGAF50000403086 fastq.gz 3.7 GB
EGAF50000403087 fastq.gz 3.3 GB
EGAF50000403088 fastq.gz 1.5 GB
EGAF50000403089 fastq.gz 3.2 GB
EGAF50000403090 fastq.gz 4.1 GB
EGAF50000403091 fastq.gz 2.3 GB
EGAF50000403092 fastq.gz 2.1 GB
EGAF50000403093 fastq.gz 2.8 GB
EGAF50000403094 fastq.gz 1.9 GB
EGAF50000403095 fastq.gz 4.2 GB
EGAF50000403096 fastq.gz 5.2 GB
EGAF50000403097 fastq.gz 2.4 GB
EGAF50000403098 fastq.gz 1.5 GB
EGAF50000403099 fastq.gz 3.2 GB
EGAF50000403100 fastq.gz 4.7 GB
EGAF50000403101 fastq.gz 1.7 GB
EGAF50000403102 fastq.gz 1.6 GB
EGAF50000403103 fastq.gz 3.4 GB
EGAF50000403104 fastq.gz 1.7 GB
EGAF50000403105 fastq.gz 3.6 GB
EGAF50000403106 fastq.gz 1.1 GB
EGAF50000403107 fastq.gz 2.3 GB
EGAF50000403108 fastq.gz 5.1 GB
EGAF50000403109 fastq.gz 1.4 GB
EGAF50000403110 fastq.gz 6.2 GB
EGAF50000403111 fastq.gz 2.9 GB
EGAF50000403112 fastq.gz 3.9 GB
EGAF50000403113 fastq.gz 1.8 GB
EGAF50000403114 fastq.gz 1.6 GB
EGAF50000403115 fastq.gz 3.5 GB
EGAF50000403116 fastq.gz 3.0 GB
EGAF50000403117 fastq.gz 6.5 GB
EGAF50000403118 fastq.gz 4.0 GB
EGAF50000403119 fastq.gz 2.7 GB
EGAF50000403120 fastq.gz 5.8 GB
EGAF50000403121 fastq.gz 1.6 GB
EGAF50000403122 fastq.gz 3.5 GB
64 Files (194.1 GB)