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WGS Data from 42 Multi-Region Sampled IPMN-PDACs and 12 Matched Normal Samples

This dataset contains whole genome sequencing (WGS) data from 42 IPMN-PDAC and 12 normal samples, with tumours collected from multiple regions within each tumour to capture intra-tumour heterogeneity. Tumour and matched normal samples were sequenced to study somatic mutations, structural variants, copy number alterations, mutational signatures and clonal evolution during IPMN-PDAC progression. The sequencing was performed using Illumina NovaSeq instrument with 150 bp paired-end reads.

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Access Policy for the IPMN-PDAC Whole Genome Sequencing Dataset

This dataset is available through controlled access managed by the IPMN-PDAC Whole Genome Sequencing DAC. Access will be granted only to qualified researchers conducting legitimate biomedical research that is consistent with the informed consent provided by study participants and the approved data use conditions. Applicants must submit a data access request describing the proposed research and agree to comply with the applicable Data Access Agreement (DAA), ethical requirements, and institutional regulations. Approved data users must: • Use the data only for the approved research purposes. • Protect the confidentiality and privacy of study participants. • Not attempt to identify or re-identify individual participants. • Implement appropriate technical and organisational measures for the secure storage and processing of the data. • Acknowledge the data source and dataset accession in all publications and presentations. • Comply with all applicable ethical, legal, and institutional requirements. The data must not be redistributed, transferred, or shared with third parties without prior approval from the DAC. The DAC will review all data access requests and reserves the right to approve, reject, modify, or revoke access where appropriate.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000001182 Whole Genome Sequencing
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  • Dataset Released

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
EGAF50000412355 83.8 GB
EGAF50000412356 19.5 GB
EGAF50000412357 36.8 GB
EGAF50000412358 40.1 GB
EGAF50000412359 18.0 GB
EGAF50000412360 43.1 GB
EGAF50000412361 15.5 GB
EGAF50000412362 40.8 GB
EGAF50000412363 24.3 GB
EGAF50000412364 27.4 GB
EGAF50000412365 28.8 GB
EGAF50000412366 32.3 GB
EGAF50000412367 31.6 GB
EGAF50000412368 28.0 GB
EGAF50000412369 31.0 GB
EGAF50000412370 51.4 GB
EGAF50000412371 38.6 GB
EGAF50000412372 43.6 GB
EGAF50000412373 25.8 GB
EGAF50000412374 66.9 GB
EGAF50000412375 48.8 GB
EGAF50000412376 57.5 GB
EGAF50000412377 26.5 GB
EGAF50000412378 52.2 GB
EGAF50000412379 28.2 GB
EGAF50000412380 63.4 GB
EGAF50000412381 47.7 GB
EGAF50000412382 41.0 GB
EGAF50000412383 36.9 GB
EGAF50000412384 14.5 GB
EGAF50000412385 32.8 GB
EGAF50000412386 74.3 GB
EGAF50000412387 53.7 GB
EGAF50000412388 50.1 GB
EGAF50000412389 25.8 GB
EGAF50000412390 57.3 GB
EGAF50000412391 68.5 GB
EGAF50000412392 15.7 GB
EGAF50000412393 26.8 GB
EGAF50000412394 33.4 GB
EGAF50000412395 58.0 GB
EGAF50000412396 53.6 GB
EGAF50000412397 27.6 GB
EGAF50000412398 30.2 GB
EGAF50000412399 63.4 GB
EGAF50000412400 29.9 GB
EGAF50000412401 31.5 GB
EGAF50000412402 62.7 GB
EGAF50000412403 33.4 GB
EGAF50000412404 70.3 GB
EGAF50000412405 32.9 GB
EGAF50000412406 83.4 GB
EGAF50000412407 30.1 GB
EGAF50000412408 22.2 GB
54 Files (2.2 TB)