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Long read whole genome sequencing data from brain postmortem tissue

This dataset contains 48 long read whole genome sequencing runs (Oxford Nanopore Technologies) derived from postmortem anterior cingulate gyrus tissue of 7 healthy donors and 41 donors with Parkinson's disease. The data has been aligned to T2T-CHM13v2.0 reference genome, is phased and contains information on C or CpG methylation (including hydroxymethylation)

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This policy applies to the access to and transfer of VIB research datasets that contain non-anonymous Personal Data which are subject to the provisions of the General Data Protection Regulation (EU) 2016/679.

Applicability This policy applies to the access to and transfer of VIB research datasets that contain non-anonymous Personal Data which are subject to the provisions of the General Data Protection Regulation (EU) 2016/679. Access/transfer conditions - The access/transfer is subject to approval by the VIB Data Access Committee. - The proposed research purpose should not be incompatible with the primary research purpose for which the data were originally generated. - The Recipient shall have the necessary competence to handle such datasets. - The Recipient shall have in place adequate safeguards for the protection of Personal Data. - Access is subject to a Data Transfer/Access Agreement which will be managed by VIB Innovation & Business. - The Data Transfer/Access will be limited to the Data that are necessary for the proposed research. Access/transfer procedure - Requests to access or obtain non-anonymous datasets should be submitted to dac@vib.be with a copy to the responsible scientist that has uploaded the dataset onto the repository. - The Requestor must fill in an online request form that will gather amongst other the following information: o Name, affiliation (legal entity) and contact information of the requesting recipient party. o Reference to the specific dataset(s) for which access or transfer is requested. o Description of the research purpose for which the data will be used. - The VIB Data Access Committee will take a decision to approve access/transfer within 14 days upon receipt of the request, involving the responsible scientist. - Data access will be given / Data will be transferred subject to and after completion of a Data Transfer/Access Agreement.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000001452 Whole Genome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
EGAF50000507257 cram 65.6 GB
EGAF50000507258 cram 58.9 GB
EGAF50000507259 cram 41.5 GB
EGAF50000507260 cram 64.0 GB
EGAF50000507261 cram 59.6 GB
EGAF50000507262 cram 65.8 GB
EGAF50000507263 cram 41.9 GB
EGAF50000507264 cram 65.8 GB
EGAF50000507265 cram 62.1 GB
EGAF50000507266 cram 94.3 GB
EGAF50000507267 cram 62.4 GB
EGAF50000507268 cram 58.2 GB
EGAF50000507269 cram 89.7 GB
EGAF50000507270 cram 55.8 GB
EGAF50000507271 cram 41.8 GB
EGAF50000507272 cram 47.6 GB
EGAF50000507273 cram 50.3 GB
EGAF50000507274 cram 115.3 GB
EGAF50000507275 cram 68.6 GB
EGAF50000507276 cram 42.6 GB
EGAF50000507277 cram 67.4 GB
EGAF50000507278 cram 52.5 GB
EGAF50000507279 cram 52.5 GB
EGAF50000507280 cram 52.6 GB
EGAF50000507281 cram 80.3 GB
EGAF50000507282 cram 44.1 GB
EGAF50000507283 cram 105.5 GB
EGAF50000507284 cram 41.8 GB
EGAF50000507285 cram 41.3 GB
EGAF50000507286 cram 41.8 GB
EGAF50000507287 cram 90.6 GB
EGAF50000507288 cram 49.9 GB
EGAF50000507289 cram 88.2 GB
EGAF50000507290 cram 39.3 GB
EGAF50000507291 cram 71.8 GB
EGAF50000507292 cram 68.3 GB
EGAF50000507293 cram 76.6 GB
EGAF50000507294 cram 87.4 GB
EGAF50000507295 cram 71.1 GB
EGAF50000507296 cram 53.4 GB
EGAF50000507297 cram 54.8 GB
EGAF50000507298 cram 121.4 GB
EGAF50000507299 cram 50.1 GB
EGAF50000507300 cram 68.1 GB
EGAF50000507301 cram 45.1 GB
EGAF50000507302 cram 55.3 GB
EGAF50000507303 cram 38.2 GB
EGAF50000507304 cram 64.8 GB
48 Files (3.0 TB)