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As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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single-nuclei RNA-seq of primary pineal parenchymal tumors

Raw fastq files for 10x Chromium snRNA-seq of pineal parenchymal tumors profiled in the study "A tumor-associated photoreceptor signature unifies distinct central nervous system malignancies".

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DUO:0000006
version: 2021-02-23

health or medical or biomedical research

This data use permission indicates that use is allowed for health/medical/biomedical purposes; does not include the study of population origins or ancestry.

St. Jude Pineoblastoma Single-Nucleus RNA-seq Data Access Policy

This policy covers controlled access to single-nucleus RNA-seq data from pediatric pineoblastoma and related brain tumors. Data are available to bona fide researchers worldwide for ethically approved biomedical research consistent with the original consent. Requests will be reviewed by the Data Access Committee to ensure appropriate use, data protection, and privacy safeguards. Recipients must not attempt re-identification, must not redistribute individual-level data outside the approved project, and must acknowledge the dataset and EGA accession(s) in publications.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000001457 Transcriptome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000507724 fastq.gz 4.7 GB
EGAF50000507725 fastq.gz 6.4 GB
EGAF50000507726 fastq.gz 7.7 GB
EGAF50000507727 fastq.gz 19.4 GB
EGAF50000507728 fastq.gz 13.7 GB
EGAF50000507729 fastq.gz 2.1 GB
EGAF50000507730 fastq.gz 18.5 GB
EGAF50000507731 fastq.gz 13.4 GB
EGAF50000507732 fastq.gz 12.1 GB
EGAF50000507733 fastq.gz 20.2 GB
EGAF50000507734 fastq.gz 23.3 GB
EGAF50000507735 fastq.gz 3.8 GB
EGAF50000507736 fastq.gz 5.3 GB
EGAF50000507737 fastq.gz 7.3 GB
EGAF50000507738 fastq.gz 9.5 GB
EGAF50000507739 fastq.gz 6.2 GB
EGAF50000507740 fastq.gz 3.2 GB
EGAF50000507741 fastq.gz 10.9 GB
EGAF50000507742 fastq.gz 13.2 GB
EGAF50000507743 fastq.gz 5.6 GB
EGAF50000507744 fastq.gz 5.5 GB
EGAF50000507745 fastq.gz 10.9 GB
EGAF50000507746 fastq.gz 16.1 GB
EGAF50000507747 fastq.gz 5.7 GB
EGAF50000507748 fastq.gz 6.7 GB
EGAF50000507749 fastq.gz 9.5 GB
EGAF50000507750 fastq.gz 7.3 GB
EGAF50000507751 fastq.gz 3.0 GB
EGAF50000507752 fastq.gz 15.7 GB
EGAF50000507753 fastq.gz 5.3 GB
EGAF50000507754 fastq.gz 5.6 GB
EGAF50000507755 fastq.gz 2.2 GB
EGAF50000507756 fastq.gz 12.1 GB
EGAF50000507757 fastq.gz 10.7 GB
EGAF50000507758 fastq.gz 14.3 GB
EGAF50000507759 fastq.gz 3.7 GB
EGAF50000507760 fastq.gz 2.9 GB
EGAF50000507761 fastq.gz 14.8 GB
EGAF50000507762 fastq.gz 2.4 GB
EGAF50000507763 fastq.gz 6.6 GB
EGAF50000507764 fastq.gz 15.5 GB
EGAF50000507765 fastq.gz 6.3 GB
EGAF50000507766 fastq.gz 2.2 GB
EGAF50000507767 fastq.gz 6.7 GB
EGAF50000507768 fastq.gz 5.9 GB
EGAF50000507769 fastq.gz 5.4 GB
EGAF50000507770 fastq.gz 11.5 GB
EGAF50000507771 fastq.gz 16.5 GB
EGAF50000507772 fastq.gz 2.8 GB
EGAF50000507773 fastq.gz 12.6 GB
EGAF50000507774 fastq.gz 4.7 GB
EGAF50000507775 fastq.gz 5.7 GB
EGAF50000507776 fastq.gz 5.2 GB
EGAF50000507777 fastq.gz 2.7 GB
EGAF50000507778 fastq.gz 2.6 GB
EGAF50000507779 fastq.gz 14.4 GB
EGAF50000507780 fastq.gz 9.4 GB
EGAF50000507781 fastq.gz 5.1 GB
EGAF50000507782 fastq.gz 14.7 GB
EGAF50000507783 fastq.gz 3.0 GB
EGAF50000507784 fastq.gz 21.9 GB
EGAF50000507785 fastq.gz 15.8 GB
EGAF50000507786 fastq.gz 2.4 GB
EGAF50000507787 fastq.gz 14.3 GB
EGAF50000507788 fastq.gz 5.6 GB
EGAF50000507789 fastq.gz 6.3 GB
EGAF50000507790 fastq.gz 15.0 GB
EGAF50000507791 fastq.gz 8.9 GB
EGAF50000507792 fastq.gz 3.1 GB
EGAF50000507793 fastq.gz 3.3 GB
EGAF50000507794 fastq.gz 6.7 GB
EGAF50000507795 fastq.gz 6.2 GB
EGAF50000507796 fastq.gz 7.6 GB
EGAF50000507797 fastq.gz 14.3 GB
EGAF50000507798 fastq.gz 7.1 GB
EGAF50000507799 fastq.gz 2.9 GB
EGAF50000507800 fastq.gz 6.6 GB
EGAF50000507801 fastq.gz 5.4 GB
EGAF50000507802 fastq.gz 23.2 GB
EGAF50000507803 fastq.gz 12.1 GB
EGAF50000507804 fastq.gz 2.7 GB
EGAF50000507805 fastq.gz 8.6 GB
EGAF50000507806 fastq.gz 5.5 GB
EGAF50000507807 fastq.gz 9.5 GB
EGAF50000507808 fastq.gz 6.1 GB
EGAF50000507809 fastq.gz 4.7 GB
EGAF50000507810 fastq.gz 6.7 GB
EGAF50000507811 fastq.gz 2.6 GB
EGAF50000507812 fastq.gz 23.2 GB
EGAF50000507813 fastq.gz 5.7 GB
EGAF50000507814 fastq.gz 2.7 GB
EGAF50000507815 fastq.gz 4.2 GB
EGAF50000507816 fastq.gz 5.6 GB
EGAF50000507817 fastq.gz 2.7 GB
EGAF50000507818 fastq.gz 2.6 GB
EGAF50000507819 fastq.gz 9.7 GB
EGAF50000507820 fastq.gz 16.3 GB
EGAF50000507821 fastq.gz 14.7 GB
EGAF50000507822 fastq.gz 7.2 GB
EGAF50000507823 fastq.gz 7.2 GB
EGAF50000507824 fastq.gz 2.6 GB
EGAF50000507825 fastq.gz 6.4 GB
EGAF50000507826 fastq.gz 5.4 GB
EGAF50000507827 fastq.gz 7.1 GB
EGAF50000507828 fastq.gz 3.3 GB
EGAF50000507829 fastq.gz 7.1 GB
EGAF50000507830 fastq.gz 19.4 GB
EGAF50000507831 fastq.gz 5.4 GB
EGAF50000507832 fastq.gz 10.0 GB
EGAF50000507833 fastq.gz 5.0 GB
EGAF50000507834 fastq.gz 4.7 GB
EGAF50000507835 fastq.gz 16.1 GB
EGAF50000507836 fastq.gz 10.9 GB
EGAF50000507837 fastq.gz 2.5 GB
EGAF50000507838 fastq.gz 6.5 GB
EGAF50000507839 fastq.gz 4.8 GB
EGAF50000507840 fastq.gz 15.6 GB
EGAF50000507841 fastq.gz 6.9 GB
EGAF50000507842 fastq.gz 12.8 GB
EGAF50000507843 fastq.gz 16.5 GB
EGAF50000507844 fastq.gz 24.9 GB
EGAF50000507845 fastq.gz 7.3 GB
EGAF50000507846 fastq.gz 7.0 GB
EGAF50000507847 fastq.gz 5.7 GB
EGAF50000507848 fastq.gz 19.5 GB
EGAF50000507849 fastq.gz 7.6 GB
EGAF50000507850 fastq.gz 15.8 GB
EGAF50000507851 fastq.gz 13.4 GB
EGAF50000507852 fastq.gz 2.5 GB
EGAF50000507853 fastq.gz 15.6 GB
EGAF50000507854 fastq.gz 7.4 GB
EGAF50000507855 fastq.gz 9.9 GB
EGAF50000507856 fastq.gz 6.9 GB
EGAF50000507857 fastq.gz 13.7 GB
EGAF50000507858 fastq.gz 14.1 GB
EGAF50000507859 fastq.gz 18.7 GB
EGAF50000507860 fastq.gz 5.7 GB
EGAF50000507861 fastq.gz 15.1 GB
EGAF50000507862 fastq.gz 2.7 GB
EGAF50000507863 fastq.gz 8.8 GB
EGAF50000507864 fastq.gz 13.3 GB
EGAF50000507865 fastq.gz 7.0 GB
EGAF50000507866 fastq.gz 5.1 GB
EGAF50000507867 fastq.gz 4.7 GB
EGAF50000507868 fastq.gz 10.4 GB
EGAF50000507869 fastq.gz 5.7 GB
EGAF50000507870 fastq.gz 15.6 GB
EGAF50000507871 fastq.gz 13.9 GB
EGAF50000507872 fastq.gz 7.2 GB
EGAF50000507873 fastq.gz 19.5 GB
EGAF50000507874 fastq.gz 11.2 GB
EGAF50000507875 fastq.gz 18.5 GB
EGAF50000507876 fastq.gz 2.5 GB
EGAF50000507877 fastq.gz 23.0 GB
EGAF50000507878 fastq.gz 5.6 GB
EGAF50000507879 fastq.gz 10.6 GB
EGAF50000507880 fastq.gz 6.1 GB
EGAF50000507881 fastq.gz 8.5 GB
EGAF50000507882 fastq.gz 5.9 GB
EGAF50000507883 fastq.gz 9.9 GB
EGAF50000507884 fastq.gz 7.1 GB
EGAF50000507885 fastq.gz 6.0 GB
EGAF50000507886 fastq.gz 13.7 GB
EGAF50000507887 fastq.gz 5.9 GB
EGAF50000507888 fastq.gz 5.7 GB
EGAF50000507889 fastq.gz 6.2 GB
EGAF50000507890 fastq.gz 5.5 GB
EGAF50000507891 fastq.gz 2.3 GB
EGAF50000507892 fastq.gz 1.8 GB
EGAF50000507893 fastq.gz 3.2 GB
EGAF50000507894 fastq.gz 3.0 GB
EGAF50000507895 fastq.gz 7.4 GB
EGAF50000507896 fastq.gz 13.4 GB
EGAF50000507897 fastq.gz 6.5 GB
EGAF50000507898 fastq.gz 11.7 GB
EGAF50000507899 fastq.gz 4.2 GB
EGAF50000507900 fastq.gz 5.4 GB
EGAF50000507901 fastq.gz 5.7 GB
EGAF50000507902 fastq.gz 2.9 GB
EGAF50000507903 fastq.gz 13.2 GB
EGAF50000507904 fastq.gz 8.6 GB
EGAF50000507905 fastq.gz 5.2 GB
EGAF50000507906 fastq.gz 6.7 GB
EGAF50000507907 fastq.gz 2.6 GB
EGAF50000507908 fastq.gz 11.4 GB
EGAF50000507909 fastq.gz 6.4 GB
EGAF50000507910 fastq.gz 12.0 GB
EGAF50000507911 fastq.gz 9.9 GB
EGAF50000507912 fastq.gz 20.8 GB
EGAF50000507913 fastq.gz 11.8 GB
EGAF50000507914 fastq.gz 5.7 GB
EGAF50000507915 fastq.gz 1.8 GB
EGAF50000507916 fastq.gz 5.5 GB
EGAF50000507917 fastq.gz 5.5 GB
EGAF50000507918 fastq.gz 5.6 GB
EGAF50000507919 fastq.gz 6.2 GB
EGAF50000507920 fastq.gz 2.3 GB
EGAF50000507921 fastq.gz 6.8 GB
EGAF50000507922 fastq.gz 9.9 GB
EGAF50000507923 fastq.gz 9.9 GB
EGAF50000507924 fastq.gz 2.6 GB
EGAF50000507925 fastq.gz 4.9 GB
EGAF50000507926 fastq.gz 17.1 GB
EGAF50000507927 fastq.gz 6.6 GB
EGAF50000507928 fastq.gz 4.8 GB
EGAF50000507929 fastq.gz 2.0 GB
EGAF50000507930 fastq.gz 8.8 GB
EGAF50000507931 fastq.gz 12.0 GB
EGAF50000507932 fastq.gz 13.2 GB
EGAF50000507933 fastq.gz 21.4 GB
EGAF50000507934 fastq.gz 8.7 GB
EGAF50000507935 fastq.gz 3.3 GB
EGAF50000507936 fastq.gz 12.5 GB
EGAF50000507937 fastq.gz 6.3 GB
EGAF50000507938 fastq.gz 12.6 GB
EGAF50000507939 fastq.gz 8.7 GB
EGAF50000507940 fastq.gz 6.4 GB
EGAF50000507941 fastq.gz 2.3 GB
EGAF50000507942 fastq.gz 14.0 GB
EGAF50000507943 fastq.gz 5.3 GB
EGAF50000507944 fastq.gz 5.7 GB
EGAF50000507945 fastq.gz 5.6 GB
EGAF50000507946 fastq.gz 15.9 GB
EGAF50000507947 fastq.gz 21.3 GB
EGAF50000507948 fastq.gz 6.4 GB
EGAF50000507949 fastq.gz 9.5 GB
EGAF50000507950 fastq.gz 13.0 GB
EGAF50000507951 fastq.gz 6.5 GB
EGAF50000507952 fastq.gz 21.1 GB
EGAF50000507953 fastq.gz 6.4 GB
EGAF50000507954 fastq.gz 17.2 GB
EGAF50000507955 fastq.gz 15.4 GB
EGAF50000507956 fastq.gz 7.6 GB
EGAF50000507957 fastq.gz 2.5 GB
EGAF50000507958 fastq.gz 21.8 GB
EGAF50000507959 fastq.gz 2.6 GB
EGAF50000507960 fastq.gz 6.5 GB
EGAF50000507961 fastq.gz 20.1 GB
EGAF50000507962 fastq.gz 12.7 GB
EGAF50000507963 fastq.gz 7.5 GB
EGAF50000507964 fastq.gz 8.6 GB
EGAF50000507965 fastq.gz 9.8 GB
EGAF50000507966 fastq.gz 14.0 GB
EGAF50000507967 fastq.gz 18.6 GB
EGAF50000507968 fastq.gz 7.2 GB
EGAF50000507969 fastq.gz 4.6 GB
EGAF50000507970 fastq.gz 8.9 GB
EGAF50000507971 fastq.gz 10.7 GB
EGAF50000507972 fastq.gz 15.9 GB
EGAF50000507973 fastq.gz 14.6 GB
EGAF50000507974 fastq.gz 7.6 GB
EGAF50000507975 fastq.gz 6.9 GB
EGAF50000507976 fastq.gz 4.8 GB
EGAF50000507977 fastq.gz 5.1 GB
EGAF50000507978 fastq.gz 14.0 GB
EGAF50000507979 fastq.gz 13.2 GB
EGAF50000507980 fastq.gz 6.5 GB
EGAF50000507981 fastq.gz 6.6 GB
EGAF50000507982 fastq.gz 26.2 GB
EGAF50000507983 fastq.gz 13.2 GB
EGAF50000507984 fastq.gz 4.7 GB
EGAF50000507985 fastq.gz 13.3 GB
EGAF50000507986 fastq.gz 16.7 GB
EGAF50000507987 fastq.gz 6.7 GB
264 Files (2.4 TB)