About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Human omentum cell atlas

This dataset contains single-cell RNA sequencing data derived from freshly dissociated human omental tissue. The study investigates the transcriptomic landscape of the omentum by comparing samples from patients with benign conditions against those with ovarian cancer metastasis. To capture the heterogeneity of the metastatic niche, sampling was performed across distinct anatomical sites, including non-metastasized tissue, distant omental regions, peritumoral zones, and the tumor core. This comprehensive profiling aims to define the cellular remodeling associated with malignant transformation

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Data Access Policy of Datasets controlled by MF-DAC

ATTENTION: Please check the following policy and the documents/information to provide in order to get access to the requested datasets. You can find the governing policy on Zenodo under the link: https://zenodo.org/records/12517622 Please provide all information as requested in the document to the MF-DAC. Additionally, you can find more information about the Data Access Committee of the Medical Faculty of the University of Basel (MF-DAC) under the following link on Zenodo: https://zenodo.org/records/10137776

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000001465 RNASeq

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000508211 fastq.gz 15.4 GB
EGAF50000508212 fastq.gz 15.2 GB
EGAF50000508213 fastq.gz 15.5 GB
EGAF50000508214 fastq.gz 16.1 GB
EGAF50000508215 fastq.gz 7.1 GB
EGAF50000508216 fastq.gz 6.8 GB
EGAF50000508217 fastq.gz 16.6 GB
EGAF50000508218 fastq.gz 15.8 GB
EGAF50000508219 fastq.gz 14.0 GB
EGAF50000508220 fastq.gz 7.1 GB
EGAF50000508221 fastq.gz 5.5 GB
EGAF50000508222 fastq.gz 13.2 GB
EGAF50000508223 fastq.gz 7.4 GB
EGAF50000508224 fastq.gz 7.3 GB
EGAF50000508225 fastq.gz 14.9 GB
EGAF50000508226 fastq.gz 16.6 GB
EGAF50000508227 fastq.gz 6.8 GB
EGAF50000508228 fastq.gz 6.6 GB
EGAF50000508229 fastq.gz 6.6 GB
EGAF50000508230 fastq.gz 15.0 GB
EGAF50000508231 fastq.gz 16.4 GB
EGAF50000508232 fastq.gz 6.5 GB
EGAF50000508233 fastq.gz 15.2 GB
EGAF50000508234 fastq.gz 6.6 GB
EGAF50000508235 fastq.gz 7.2 GB
EGAF50000508236 fastq.gz 6.5 GB
EGAF50000508237 fastq.gz 17.0 GB
EGAF50000508238 fastq.gz 12.6 GB
EGAF50000508239 fastq.gz 7.0 GB
EGAF50000508240 fastq.gz 6.6 GB
EGAF50000508241 fastq.gz 17.0 GB
EGAF50000508242 fastq.gz 6.9 GB
EGAF50000508243 fastq.gz 14.5 GB
EGAF50000508244 fastq.gz 6.4 GB
EGAF50000508245 fastq.gz 15.4 GB
EGAF50000508246 fastq.gz 15.3 GB
EGAF50000508247 fastq.gz 16.2 GB
EGAF50000508248 fastq.gz 6.1 GB
EGAF50000508249 fastq.gz 7.4 GB
EGAF50000508250 fastq.gz 16.0 GB
EGAF50000508251 fastq.gz 6.9 GB
EGAF50000508252 fastq.gz 6.5 GB
EGAF50000508253 fastq.gz 6.5 GB
EGAF50000508254 fastq.gz 14.0 GB
EGAF50000508255 fastq.gz 15.0 GB
EGAF50000508256 fastq.gz 6.4 GB
EGAF50000508257 fastq.gz 5.3 GB
EGAF50000508258 fastq.gz 14.9 GB
EGAF50000508259 fastq.gz 6.1 GB
EGAF50000508260 fastq.gz 17.3 GB
EGAF50000508261 fastq.gz 16.3 GB
EGAF50000508262 fastq.gz 16.1 GB
EGAF50000508263 fastq.gz 7.0 GB
EGAF50000508264 fastq.gz 5.7 GB
EGAF50000508265 fastq.gz 14.8 GB
EGAF50000508266 fastq.gz 6.7 GB
EGAF50000508267 fastq.gz 12.2 GB
EGAF50000508268 fastq.gz 6.9 GB
EGAF50000508269 fastq.gz 7.3 GB
EGAF50000508270 fastq.gz 7.7 GB
EGAF50000508271 fastq.gz 16.2 GB
EGAF50000508272 fastq.gz 15.9 GB
EGAF50000508273 fastq.gz 15.2 GB
EGAF50000508274 fastq.gz 6.6 GB
EGAF50000508275 fastq.gz 6.3 GB
EGAF50000508276 fastq.gz 7.1 GB
EGAF50000508277 fastq.gz 17.7 GB
EGAF50000508278 fastq.gz 6.8 GB
EGAF50000508279 fastq.gz 16.2 GB
EGAF50000508280 fastq.gz 15.9 GB
EGAF50000508281 fastq.gz 7.5 GB
EGAF50000508282 fastq.gz 17.7 GB
72 Files (800.9 GB)