Targeted DNA sequencing of TTFields-treated glioblastoma, IDH wildtype
This dataset contains raw paired-end FASTQ files from targeted DNA sequencing using the TruSight Oncology 500 panel in patients with glioblastoma, IDH wildtype, treated with surgery, standard chemoradiotherapy and Tumor Treating Fields at Charité – Universitätsmedizin Berlin. Tumour samples were collected at first surgery and are linked to pseudonymised clinical and molecular annotations described in the associated EGA study.
- 07/01/2026
- 63 samples
- DAC: EGAC50000000843
- Technology: NextSeq 550
TTFields Glioblastoma Genomic Data Access Policy, Charité – Universitätsmedizin Berlin
This policy governs controlled access to genomic and associated clinical data from patients with glioblastoma, IDH wildtype, treated with surgery, standard chemoradiotherapy and Tumor Treating Fields at Charité – Universitätsmedizin Berlin. The dataset includes DNA sequencing data and limited pseudonymised clinical information. All participants provided informed consent for the use of their data in future research under appropriate ethical and legal safeguards. Access to the data will be granted only to qualified researchers affiliated with recognised research institutions, for health-related biomedical research on brain tumours and closely related conditions, in accordance with the participants’ informed consent, the study’s ethics approval and applicable data protection regulations. Approved users must not attempt to re-identify participants or contact them, must not share the data with unauthorised third parties, and must store the data securely. Data must not be uploaded to open public repositories and should be destroyed or securely archived when the approved project is completed or when the access period expires. Any publications resulting from the use of these data must not contain potentially identifying information and should acknowledge the European Genome-phenome Archive (EGA) accession and this Data Access Policy.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS50000001469 | Cancer Genomics |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Quality Report |
Located in
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|---|---|---|---|---|
| EGAF50000508975 | fastq.gz | 2.4 GB |
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| EGAF50000508976 | fastq.gz | 2.4 GB |
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| EGAF50000508977 | fastq.gz | 2.1 GB |
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| EGAF50000508978 | fastq.gz | 2.1 GB |
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| EGAF50000508979 | fastq.gz | 3.6 GB |
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| EGAF50000508980 | fastq.gz | 3.6 GB |
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| EGAF50000508981 | fastq.gz | 3.8 GB |
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| EGAF50000508982 | fastq.gz | 3.8 GB |
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| EGAF50000508983 | fastq.gz | 3.3 GB |
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| EGAF50000508984 | fastq.gz | 3.4 GB |
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| EGAF50000508985 | fastq.gz | 4.2 GB |
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| EGAF50000508986 | fastq.gz | 4.2 GB |
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| EGAF50000508987 | fastq.gz | 4.2 GB |
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| EGAF50000508988 | fastq.gz | 4.2 GB |
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| EGAF50000508989 | fastq.gz | 3.3 GB |
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| EGAF50000508990 | fastq.gz | 3.3 GB |
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| EGAF50000508991 | fastq.gz | 4.5 GB |
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| EGAF50000508992 | fastq.gz | 4.5 GB |
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| EGAF50000508993 | fastq.gz | 2.4 GB |
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| EGAF50000508994 | fastq.gz | 2.4 GB |
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| EGAF50000508995 | fastq.gz | 3.4 GB |
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| EGAF50000508996 | fastq.gz | 3.4 GB |
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| EGAF50000508997 | fastq.gz | 2.3 GB |
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| EGAF50000508998 | fastq.gz | 2.3 GB |
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| EGAF50000508999 | fastq.gz | 3.5 GB |
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| EGAF50000509000 | fastq.gz | 3.5 GB |
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| EGAF50000509001 | fastq.gz | 4.6 GB |
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| EGAF50000509002 | fastq.gz | 4.6 GB |
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| EGAF50000509003 | fastq.gz | 3.4 GB |
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| EGAF50000509004 | fastq.gz | 3.4 GB |
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| EGAF50000509005 | fastq.gz | 3.3 GB |
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| EGAF50000509006 | fastq.gz | 3.3 GB |
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| EGAF50000509007 | fastq.gz | 2.8 GB |
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| EGAF50000509008 | fastq.gz | 3.2 GB |
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| EGAF50000509009 | fastq.gz | 2.5 GB |
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| EGAF50000509010 | fastq.gz | 2.8 GB |
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| EGAF50000509011 | fastq.gz | 3.8 GB |
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| EGAF50000509012 | fastq.gz | 3.8 GB |
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| EGAF50000509013 | fastq.gz | 4.1 GB |
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| EGAF50000509014 | fastq.gz | 4.1 GB |
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| EGAF50000509015 | fastq.gz | 4.2 GB |
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| EGAF50000509016 | fastq.gz | 4.2 GB |
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| EGAF50000509017 | fastq.gz | 4.4 GB |
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| EGAF50000509018 | fastq.gz | 4.4 GB |
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| EGAF50000509019 | fastq.gz | 4.3 GB |
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| EGAF50000509020 | fastq.gz | 4.2 GB |
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| EGAF50000509021 | fastq.gz | 4.5 GB |
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| EGAF50000509022 | fastq.gz | 4.5 GB |
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| EGAF50000509023 | fastq.gz | 4.7 GB |
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| EGAF50000509024 | fastq.gz | 3.1 GB |
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| EGAF50000509025 | fastq.gz | 4.7 GB |
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| EGAF50000509026 | fastq.gz | 3.1 GB |
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| EGAF50000509027 | fastq.gz | 3.3 GB |
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| EGAF50000509028 | fastq.gz | 3.3 GB |
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| EGAF50000509029 | fastq.gz | 3.1 GB |
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| EGAF50000509030 | fastq.gz | 3.1 GB |
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| EGAF50000509031 | fastq.gz | 3.3 GB |
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| EGAF50000509032 | fastq.gz | 3.4 GB |
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| EGAF50000509033 | fastq.gz | 4.2 GB |
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| EGAF50000509034 | fastq.gz | 4.2 GB |
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| EGAF50000509035 | fastq.gz | 3.6 GB |
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| EGAF50000509036 | fastq.gz | 3.6 GB |
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| EGAF50000509037 | fastq.gz | 4.5 GB |
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| EGAF50000509038 | fastq.gz | 4.5 GB |
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| EGAF50000509039 | fastq.gz | 2.8 GB |
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| EGAF50000509040 | fastq.gz | 2.9 GB |
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| EGAF50000509041 | fastq.gz | 4.8 GB |
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| EGAF50000509042 | fastq.gz | 4.9 GB |
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| EGAF50000509043 | fastq.gz | 2.1 GB |
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| EGAF50000509044 | fastq.gz | 2.2 GB |
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| EGAF50000509045 | fastq.gz | 4.4 GB |
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| EGAF50000509046 | fastq.gz | 4.4 GB |
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| EGAF50000509047 | fastq.gz | 3.6 GB |
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| EGAF50000509048 | fastq.gz | 3.6 GB |
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| EGAF50000509049 | fastq.gz | 4.0 GB |
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| EGAF50000509050 | fastq.gz | 4.0 GB |
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| EGAF50000509051 | fastq.gz | 2.6 GB |
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| EGAF50000509052 | fastq.gz | 2.6 GB |
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| EGAF50000509053 | fastq.gz | 4.9 GB |
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| EGAF50000509054 | fastq.gz | 5.0 GB |
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| EGAF50000509055 | fastq.gz | 6.8 GB |
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| EGAF50000509056 | fastq.gz | 6.8 GB |
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| EGAF50000509057 | fastq.gz | 8.1 GB |
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| EGAF50000509058 | fastq.gz | 8.2 GB |
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| EGAF50000509059 | fastq.gz | 3.5 GB |
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| EGAF50000509060 | fastq.gz | 3.6 GB |
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| EGAF50000509061 | fastq.gz | 2.3 GB |
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| EGAF50000509062 | fastq.gz | 2.3 GB |
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| EGAF50000509063 | fastq.gz | 3.1 GB |
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| EGAF50000509064 | fastq.gz | 3.1 GB |
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| EGAF50000509065 | fastq.gz | 3.6 GB |
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| EGAF50000509066 | fastq.gz | 3.6 GB |
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| EGAF50000509067 | fastq.gz | 3.6 GB |
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| EGAF50000509068 | fastq.gz | 3.6 GB |
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| EGAF50000509069 | fastq.gz | 3.8 GB |
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| EGAF50000509070 | fastq.gz | 3.8 GB |
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| EGAF50000509071 | fastq.gz | 2.8 GB |
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| EGAF50000509072 | fastq.gz | 2.8 GB |
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| EGAF50000509073 | fastq.gz | 2.2 GB |
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| EGAF50000509074 | fastq.gz | 2.2 GB |
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| EGAF50000509075 | fastq.gz | 3.2 GB |
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| EGAF50000509076 | fastq.gz | 3.2 GB |
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| EGAF50000509077 | fastq.gz | 3.5 GB |
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| EGAF50000509078 | fastq.gz | 3.5 GB |
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| EGAF50000509079 | fastq.gz | 3.7 GB |
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| EGAF50000509080 | fastq.gz | 3.3 GB |
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| EGAF50000509081 | fastq.gz | 3.7 GB |
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| EGAF50000509082 | fastq.gz | 3.3 GB |
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| EGAF50000509083 | fastq.gz | 3.4 GB |
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| EGAF50000509084 | fastq.gz | 3.4 GB |
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| EGAF50000509085 | fastq.gz | 3.7 GB |
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| EGAF50000509086 | fastq.gz | 3.7 GB |
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| EGAF50000509087 | fastq.gz | 4.2 GB |
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| EGAF50000509088 | fastq.gz | 4.2 GB |
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| EGAF50000509089 | fastq.gz | 3.3 GB |
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| EGAF50000509090 | fastq.gz | 3.3 GB |
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| EGAF50000509091 | fastq.gz | 3.1 GB |
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| EGAF50000509092 | fastq.gz | 3.1 GB |
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| EGAF50000509093 | fastq.gz | 2.1 GB |
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| EGAF50000509094 | fastq.gz | 2.1 GB |
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| EGAF50000509095 | fastq.gz | 2.9 GB |
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| EGAF50000509096 | fastq.gz | 2.9 GB |
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| EGAF50000509097 | fastq.gz | 2.9 GB |
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| EGAF50000509098 | fastq.gz | 2.9 GB |
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| EGAF50000509099 | fastq.gz | 3.0 GB |
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| EGAF50000509100 | fastq.gz | 3.0 GB |
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| 126 Files (454.0 GB) | ||||