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As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Single-nucleus RNA sequencing (snRNA-seq) of seven human diffuse midline glioma (DMG) patient tumour samples.

This dataset comprises 7 paired (14 total) FASTQ files of single-nucleus RNA sequencing (snRNA-seq) data generated from seven human diffuse midline glioma (DMG) patient tumour samples. snRNA-seq libraries were generated using the 10X Chromium Controller and Chromium Next GEM Single Cell 3’ kit version 3.1 in line with the manufacturer’s instructions. Generated libraries were sequenced on an Illumina NextSeq 2000 (P3 XLEAP-SBS chemistry) at targeted 20,000 reads per nucleus.

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DUO:0000018
version: 2021-02-23

not for profit, non commercial use only

This data use modifier indicates that use of the data is limited to not-for-profit organizations and not-for-profit use, non-commercial use.

DUO:0000021
version: 2021-02-23

ethics approval required

This data use modifier indicates that the requestor must provide documentation of local IRB/ERB approval.

EGAC50000000985 Data Access Policy (UCL GOS ICH DAC)

The University College London Great Ormond Street Institute of Child Health Data Access Committee (DAC) oversees access to data generated by this study. Data were generated with appropriate ethical approval from the University College London Great Ormond Street Institute of Child Health Data Joint Research & Development Office in accordance with applicable regulatory and governance frameworks. All data were de-identified prior to submission to the European Genome-Phenome Archive (EGA). Access to data will be granted for bona fide, not-for-profit, non-commercial research use only, subject to review of a complete data access application (DAA) and agreement to the terms of data use. Access is restricted to approved research projects with appropriate ethical approval, in accordance with the Data Use Ontology (DUO) restrictions assigned to this dataset (ethics approval required; non-commercial use only). Data will be provided for use by authorised personnel only with appropriate institutional affiliations and ethical approval. Data must not be used for attempts to identify individual research participants, and must not be shared with unauthorised individuals or third parties. The DAC aims to review requests within 2 weeks. For access requests or queries, please contact: jai.sidpra@ucl.ac.uk or v.lind@ucl.ac.uk.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000001752 RNASeq

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000759385 fastq.gz 3.9 GB
EGAF50000759386 fastq.gz 8.7 GB
EGAF50000759387 fastq.gz 3.8 GB
EGAF50000759388 fastq.gz 8.3 GB
EGAF50000759389 fastq.gz 4.1 GB
EGAF50000759390 fastq.gz 9.1 GB
EGAF50000759391 fastq.gz 4.3 GB
EGAF50000759392 fastq.gz 9.5 GB
EGAF50000759393 fastq.gz 4.0 GB
EGAF50000759394 fastq.gz 8.8 GB
EGAF50000759395 fastq.gz 4.1 GB
EGAF50000759396 fastq.gz 9.1 GB
EGAF50000759397 fastq.gz 3.7 GB
EGAF50000759398 fastq.gz 8.0 GB
14 Files (89.4 GB)