Need Help?

RNA sequencing dataset of of explants treated with PRX3 inhibitor thiostrepton in mesothelioma

This dataset includes 66 RNA sequences datasets of mesothelioma explants under three conditions: baseline, untreated control and thiostrepton treatment.

Request Access

Data Access Policy for Mesothelioma Research Programme

Policy Title Data Access Policy for Mesothelioma Research Programme Policy Description This policy governs controlled access to the data generated by Mesothelioma Research Programme. The dataset contains human genomic and/or phenotypic information that could potentially lead to re‑identification if misused. Therefore, access is carefully regulated to ensure participant privacy, comply with ethical approvals, and uphold applicable laws and institutional guidelines. The data are available for legitimate scientific research purposes only. Applicants must demonstrate that their intended use aligns with the aims of the original study and does not contravene any ethical, legal, or institutional restrictions. All applicants are required to provide proof of institutional affiliation, evidence of research ethics approval, and a scientifically sound research proposal. Access Restrictions and Permitted Uses Access to the controlled‑access data is subject to the following conditions: 1. Data may only be used for research related to human health, disease, or biomedical investigation. 2. Data must not be used to attempt identification or re‑identification of any participant. 3. Data may not be used for commercial product development unless explicitly permitted by the original consent and approved by the DAC. 4. Data must not be shared, transferred, or redistributed to any third party. Each researcher who needs access must submit an independent request through EGA. 5. Data must not be used outside the scope of the approved research project. Additional uses require new approval from the DAC. 6. Data users must comply with all applicable laws and regulations related to human genomic data protection (e.g., GDPR or equivalent). Data Access Application Requirements Applicants must provide: ⦁A detailed research proposal including objectives, methodology, and expected outcomes. ⦁Proof of Research Ethics Committee (REC/IRB) approval covering the proposed use of the data. ⦁A completed and signed Data Use Agreement (DUA), confirming adherence to all terms of access and data protection requirements. ⦁Confirmation of secure data storage and handling procedures within the applicant’s institution. Oversight and Review All data access requests are reviewed by the Data Access Committee (DAC) for this project. The DAC is responsible for evaluating applications to ensure that: ⦁The proposed research is scientifically valid. ⦁The research aligns with participant consent and the ethical approval of the original study. ⦁Adequate safeguards are in place to protect participant confidentiality. The DAC for this dataset consists of the mesothelioma research group led by Professor Dean Fennell (or replace with your actual DAC information). The DAC reserves the right to request additional information, impose additional restrictions, or reject any application that does not meet the required standards. Data Use Agreement (DUA) Requirements Approved applicants must agree to the following obligations: ⦁Maintain data in a secure computing environment with controlled access. ⦁Refrain from attempting to identify individuals or linking data with external datasets that may lead to identification. ⦁Use the data only for the approved project and for the approved duration. ⦁Destroy or securely delete all downloaded data upon completion of the project or expiration of access rights. ⦁Acknowledge the original study in publications as required by the DAC. ⦁Notify the DAC of any breaches, suspected breaches, or compliance concerns immediately. Ethical and Legal Compliance All data in this dataset were collected under informed consent and approved by the appropriate Research Ethics Committee. Access and use of the data must strictly adhere to all obligations derived from: ⦁The original participant consent ⦁Institutional and national ethics requirements ⦁Data protection legislation ⦁Governance policies of the European Genome‑phenome Archive (EGA) Failure to comply with policy requirements may result in suspension of access, institutional notification, or further action as required.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000001827 Transcriptome Analysis

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
EGAF50000834809 cram 675.1 MB
EGAF50000834810 cram 697.7 MB
EGAF50000834811 cram 778.1 MB
EGAF50000834812 cram 678.1 MB
EGAF50000834813 cram 770.7 MB
EGAF50000834814 cram 827.9 MB
EGAF50000834815 cram 828.4 MB
EGAF50000834816 cram 627.0 MB
EGAF50000834817 cram 700.7 MB
EGAF50000834818 cram 686.9 MB
EGAF50000834819 cram 715.5 MB
EGAF50000834820 cram 644.6 MB
EGAF50000834821 cram 716.3 MB
EGAF50000834822 cram 773.8 MB
EGAF50000834823 cram 756.0 MB
EGAF50000834824 cram 923.3 MB
EGAF50000834825 cram 797.6 MB
EGAF50000834826 cram 764.4 MB
EGAF50000834827 cram 711.0 MB
EGAF50000834828 cram 799.9 MB
EGAF50000834829 cram 726.9 MB
EGAF50000834830 cram 704.7 MB
EGAF50000834831 cram 921.4 MB
EGAF50000834832 cram 885.1 MB
EGAF50000834833 cram 743.3 MB
EGAF50000834834 cram 900.4 MB
EGAF50000834835 cram 818.5 MB
EGAF50000834836 cram 912.7 MB
EGAF50000834837 cram 761.3 MB
EGAF50000834838 cram 668.4 MB
EGAF50000834839 cram 698.1 MB
EGAF50000834840 cram 762.9 MB
EGAF50000834841 cram 633.9 MB
EGAF50000834842 cram 821.9 MB
EGAF50000834843 cram 722.2 MB
EGAF50000834844 cram 893.7 MB
EGAF50000834845 cram 858.0 MB
EGAF50000834846 cram 830.0 MB
EGAF50000834847 cram 808.6 MB
EGAF50000834848 cram 647.3 MB
EGAF50000834849 cram 749.4 MB
EGAF50000834850 cram 748.1 MB
EGAF50000834851 cram 831.2 MB
EGAF50000834852 cram 715.7 MB
EGAF50000834853 cram 790.3 MB
EGAF50000834854 cram 700.4 MB
EGAF50000834855 cram 670.8 MB
EGAF50000834856 cram 636.0 MB
EGAF50000834857 cram 675.1 MB
EGAF50000834858 cram 743.7 MB
EGAF50000834859 cram 942.4 MB
EGAF50000834860 cram 735.5 MB
EGAF50000834861 cram 714.8 MB
EGAF50000834862 cram 800.9 MB
EGAF50000834863 cram 809.9 MB
EGAF50000834864 cram 683.8 MB
EGAF50000834865 cram 742.3 MB
EGAF50000834866 cram 796.1 MB
EGAF50000834867 cram 893.8 MB
EGAF50000834868 cram 802.1 MB
EGAF50000834869 cram 784.3 MB
EGAF50000834870 cram 825.9 MB
EGAF50000834871 cram 687.5 MB
EGAF50000834872 cram 732.3 MB
EGAF50000834873 cram 711.3 MB
EGAF50000834874 cram 674.8 MB
66 Files (50.2 GB)