Plasma cell-free small RNA sequencing of pancreatic cancer and control samples
This dataset contains plasma-derived cell-free small RNA sequencing data from 78 human samples, comprising 39 pancreatic ductal adenocarcinoma patients and 39 control subjects. Each sample was sequenced as a single-end FASTQ library on both Illumina NovaSeq 6000 and Ultima Genomics UG 100 platforms, yielding 156 submitted sequencing runs. The data were generated from SMARTer smRNA-Seq libraries to support comparative analysis of sequencing performance, mature microRNA detection, and pancreatic cancer-associated cell-free small RNA expression across the two platforms.
- 30/06/2026
- 78 samples
- DAC: EGAC50000000907
- Technologies: Illumina NovaSeq 6000, UG 100
- Archive: European Genome-phenome Archive (EGA)
DUO:0000027 version: 2021-02-23
project specific restriction
This data use modifier indicates that use is limited to use within an approved project.
WGS of cfDNA PDAC breast cancer and matched controls
Data requests are handled by the the legal department of Tel Aviv University. A data-transfer agreement will have to be signed in order for the data to be transferred.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS50000001907 | RNASeq |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Quality Report |
Located in
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|---|---|---|---|---|
| EGAF50000904673 | fastq.gz | 852.0 MB |
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| EGAF50000904674 | fastq.gz | 666.5 MB |
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| EGAF50000904675 | fastq.gz | 1.0 GB |
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| EGAF50000904676 | fastq.gz | 890.1 MB |
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| EGAF50000904677 | fastq.gz | 894.8 MB |
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| EGAF50000904678 | fastq.gz | 2.8 GB |
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| EGAF50000904679 | fastq.gz | 3.0 GB |
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| EGAF50000904680 | fastq.gz | 4.3 GB |
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| EGAF50000904681 | fastq.gz | 1.7 GB |
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| EGAF50000904682 | fastq.gz | 3.8 GB |
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| EGAF50000904683 | fastq.gz | 2.4 GB |
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| EGAF50000904684 | fastq.gz | 3.7 GB |
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| EGAF50000904685 | fastq.gz | 2.3 GB |
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| EGAF50000904686 | fastq.gz | 2.1 GB |
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| EGAF50000904687 | fastq.gz | 1.9 GB |
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| EGAF50000904688 | fastq.gz | 2.8 GB |
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| EGAF50000904689 | fastq.gz | 2.2 GB |
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| EGAF50000904690 | fastq.gz | 3.6 GB |
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| EGAF50000904691 | fastq.gz | 2.5 GB |
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| EGAF50000904692 | fastq.gz | 4.4 GB |
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| EGAF50000904693 | fastq.gz | 3.7 GB |
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| EGAF50000904694 | fastq.gz | 3.4 GB |
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| EGAF50000904695 | fastq.gz | 3.7 GB |
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| EGAF50000904696 | fastq.gz | 5.4 GB |
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| EGAF50000904697 | fastq.gz | 554.8 MB |
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| EGAF50000904698 | fastq.gz | 807.5 MB |
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| EGAF50000904699 | fastq.gz | 607.4 MB |
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| EGAF50000904700 | fastq.gz | 925.5 MB |
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| EGAF50000904701 | fastq.gz | 571.2 MB |
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| EGAF50000904702 | fastq.gz | 392.2 MB |
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| EGAF50000904703 | fastq.gz | 814.2 MB |
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| EGAF50000904704 | fastq.gz | 576.3 MB |
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| EGAF50000904705 | fastq.gz | 1.1 GB |
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| EGAF50000904706 | fastq.gz | 819.2 MB |
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| EGAF50000904707 | fastq.gz | 442.6 MB |
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| EGAF50000904708 | fastq.gz | 643.8 MB |
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| EGAF50000904709 | fastq.gz | 494.1 MB |
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| EGAF50000904710 | fastq.gz | 848.8 MB |
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| EGAF50000904711 | fastq.gz | 423.7 MB |
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| EGAF50000904712 | fastq.gz | 984.2 MB |
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| EGAF50000904713 | fastq.gz | 927.9 MB |
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| EGAF50000904714 | fastq.gz | 488.4 MB |
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| EGAF50000904715 | fastq.gz | 117.0 MB |
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| EGAF50000904716 | fastq.gz | 935.4 MB |
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| EGAF50000904717 | fastq.gz | 186.8 MB |
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| EGAF50000904718 | fastq.gz | 957.5 MB |
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| EGAF50000904719 | fastq.gz | 597.7 MB |
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| EGAF50000904720 | fastq.gz | 368.1 MB |
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| EGAF50000904721 | fastq.gz | 277.7 MB |
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| EGAF50000904722 | fastq.gz | 411.3 MB |
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| EGAF50000904723 | fastq.gz | 304.4 MB |
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| EGAF50000904724 | fastq.gz | 332.8 MB |
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| EGAF50000904725 | fastq.gz | 987.4 MB |
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| EGAF50000904726 | fastq.gz | 861.6 MB |
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| EGAF50000904727 | fastq.gz | 1.1 GB |
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| EGAF50000904728 | fastq.gz | 145.3 MB |
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| EGAF50000904729 | fastq.gz | 461.4 MB |
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| EGAF50000904730 | fastq.gz | 1.0 GB |
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| EGAF50000904731 | fastq.gz | 545.5 MB |
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| EGAF50000904732 | fastq.gz | 1.0 GB |
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| EGAF50000904733 | fastq.gz | 881.7 MB |
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| EGAF50000904734 | fastq.gz | 741.7 MB |
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| EGAF50000904735 | fastq.gz | 868.2 MB |
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| EGAF50000904736 | fastq.gz | 976.0 MB |
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| EGAF50000904737 | fastq.gz | 980.2 MB |
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| EGAF50000904738 | fastq.gz | 1.1 GB |
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| EGAF50000904739 | fastq.gz | 600.5 MB |
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| EGAF50000904740 | fastq.gz | 389.9 MB |
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| EGAF50000904741 | fastq.gz | 653.9 MB |
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| EGAF50000904742 | fastq.gz | 558.4 MB |
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| EGAF50000904743 | fastq.gz | 850.2 MB |
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| EGAF50000904744 | fastq.gz | 614.7 MB |
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| EGAF50000904745 | fastq.gz | 812.8 MB |
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| EGAF50000904746 | fastq.gz | 523.4 MB |
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| EGAF50000904747 | fastq.gz | 572.3 MB |
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| EGAF50000904748 | fastq.gz | 366.3 MB |
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| EGAF50000904749 | fastq.gz | 641.8 MB |
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| EGAF50000904750 | fastq.gz | 551.7 MB |
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| EGAF50000904751 | fastq.gz | 521.6 MB |
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| EGAF50000904752 | fastq.gz | 634.9 MB |
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| EGAF50000904753 | fastq.gz | 637.3 MB |
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| EGAF50000904754 | fastq.gz | 158.6 MB |
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| EGAF50000904755 | fastq.gz | 600.9 MB |
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| EGAF50000904756 | fastq.gz | 1.1 GB |
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| EGAF50000904757 | fastq.gz | 552.9 MB |
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| EGAF50000904758 | fastq.gz | 992.8 MB |
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| EGAF50000904759 | fastq.gz | 1.0 GB |
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| EGAF50000904760 | fastq.gz | 997.1 MB |
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| EGAF50000904761 | fastq.gz | 898.8 MB |
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| EGAF50000904762 | fastq.gz | 946.5 MB |
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| EGAF50000904763 | fastq.gz | 815.7 MB |
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| EGAF50000904764 | fastq.gz | 932.0 MB |
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| EGAF50000904765 | fastq.gz | 582.0 MB |
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| EGAF50000904766 | fastq.gz | 632.4 MB |
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| EGAF50000904767 | fastq.gz | 592.1 MB |
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| EGAF50000904768 | fastq.gz | 637.1 MB |
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| EGAF50000904769 | fastq.gz | 778.2 MB |
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| EGAF50000904770 | fastq.gz | 2.3 GB |
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| EGAF50000904771 | fastq.gz | 3.2 GB |
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| EGAF50000904772 | fastq.gz | 3.9 GB |
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| EGAF50000904773 | fastq.gz | 2.0 GB |
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| EGAF50000904774 | fastq.gz | 3.2 GB |
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| EGAF50000904775 | fastq.gz | 1.8 GB |
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| EGAF50000904776 | fastq.gz | 3.0 GB |
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| EGAF50000904777 | fastq.gz | 2.7 GB |
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| EGAF50000904778 | fastq.gz | 2.6 GB |
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| EGAF50000904779 | fastq.gz | 2.1 GB |
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| EGAF50000904780 | fastq.gz | 1.6 GB |
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| EGAF50000904781 | fastq.gz | 2.7 GB |
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| EGAF50000904782 | fastq.gz | 3.1 GB |
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| EGAF50000904783 | fastq.gz | 3.2 GB |
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| EGAF50000904784 | fastq.gz | 3.0 GB |
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| EGAF50000904785 | fastq.gz | 2.1 GB |
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| EGAF50000904786 | fastq.gz | 2.4 GB |
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| EGAF50000904787 | fastq.gz | 2.8 GB |
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| EGAF50000904788 | fastq.gz | 1.4 GB |
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| EGAF50000904789 | fastq.gz | 2.3 GB |
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| EGAF50000904790 | fastq.gz | 1.3 GB |
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| EGAF50000904791 | fastq.gz | 2.3 GB |
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| EGAF50000904792 | fastq.gz | 3.4 GB |
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| EGAF50000904793 | fastq.gz | 2.7 GB |
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| EGAF50000904794 | fastq.gz | 2.1 GB |
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| EGAF50000904795 | fastq.gz | 2.4 GB |
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| EGAF50000904796 | fastq.gz | 1.7 GB |
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| EGAF50000904797 | fastq.gz | 2.9 GB |
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| EGAF50000904798 | fastq.gz | 3.4 GB |
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| EGAF50000904799 | fastq.gz | 2.7 GB |
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| EGAF50000904800 | fastq.gz | 2.9 GB |
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| EGAF50000904801 | fastq.gz | 2.6 GB |
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| EGAF50000904802 | fastq.gz | 2.3 GB |
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| EGAF50000904803 | fastq.gz | 1.7 GB |
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| EGAF50000904804 | fastq.gz | 2.0 GB |
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| EGAF50000904805 | fastq.gz | 3.1 GB |
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| EGAF50000904806 | fastq.gz | 2.3 GB |
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| EGAF50000904807 | fastq.gz | 2.9 GB |
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| EGAF50000904808 | fastq.gz | 3.7 GB |
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| EGAF50000904809 | fastq.gz | 2.2 GB |
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| EGAF50000904810 | fastq.gz | 2.1 GB |
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| EGAF50000904811 | fastq.gz | 3.8 GB |
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| EGAF50000904812 | fastq.gz | 3.2 GB |
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| EGAF50000904813 | fastq.gz | 1.7 GB |
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| EGAF50000904814 | fastq.gz | 2.5 GB |
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| EGAF50000904815 | fastq.gz | 3.1 GB |
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| EGAF50000904816 | fastq.gz | 3.4 GB |
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| EGAF50000904817 | fastq.gz | 4.9 GB |
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| EGAF50000904818 | fastq.gz | 1.9 GB |
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| EGAF50000904819 | fastq.gz | 3.5 GB |
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| EGAF50000904820 | fastq.gz | 3.4 GB |
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| EGAF50000904821 | fastq.gz | 3.8 GB |
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| EGAF50000904822 | fastq.gz | 3.1 GB |
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| EGAF50000904823 | fastq.gz | 3.2 GB |
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| EGAF50000904824 | fastq.gz | 2.7 GB |
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| EGAF50000904825 | fastq.gz | 3.2 GB |
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| EGAF50000904826 | fastq.gz | 1.9 GB |
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| EGAF50000904827 | fastq.gz | 3.8 GB |
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| EGAF50000904828 | fastq.gz | 2.5 GB |
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| 156 Files (273.5 GB) | ||||