About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Detection of high-grade serous ovarian cancer using TP53 mutation burden in uterine lavage

In total, 436 DNA samples from the 278 patients were processed for TP53 ultradeep duplex sequencing: 278 lavages, 86 tissue samples (some patients had multiple tissue samples), and 72 blood samples. Duplex sequencing was performed on an Illumina NovaSeq 6000 by TwinStrand Biosciences using a capture panel targeting the coding regions of the TP53 gene. Data were processed by TwinStrand Biosciences and .bam files were created for each sample.

Request Access

DUO:0000019
version: 2021-02-23

publication required

This data use modifier indicates that requestor agrees to make results of studies using the data available to the larger scientific community.

DUO:0000042
version: 2021-02-23

general research use

This data use permission indicates that use is allowed for general research use for any research purpose.

Use of sequencing data policy

Data are made available on request.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000001910 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000905732 bam 32.0 MB
EGAF50000905733 bam 31.1 MB
EGAF50000905734 bam 15.6 MB
EGAF50000905735 bam 9.6 MB
EGAF50000905736 bam 43.4 MB
EGAF50000905737 bam 54.2 MB
EGAF50000905738 bam 49.7 MB
EGAF50000905739 bam 52.5 MB
EGAF50000905740 bam 48.1 MB
EGAF50000905741 bam 56.4 MB
EGAF50000905742 bam 49.6 MB
EGAF50000905743 bam 37.1 MB
EGAF50000905744 bam 58.3 MB
EGAF50000905745 bam 46.2 MB
EGAF50000905746 bam 41.7 MB
EGAF50000905747 bam 43.7 MB
EGAF50000905748 bam 9.4 MB
EGAF50000905749 bam 42.1 MB
EGAF50000905750 bam 15.7 MB
EGAF50000905751 bam 15.0 MB
EGAF50000905752 bam 32.5 MB
EGAF50000905753 bam 40.9 MB
EGAF50000905754 bam 32.1 MB
EGAF50000905755 bam 40.6 MB
EGAF50000905756 bam 34.8 MB
EGAF50000905757 bam 40.1 MB
EGAF50000905758 bam 33.9 MB
EGAF50000905759 bam 42.6 MB
EGAF50000905760 bam 36.4 MB
EGAF50000905761 bam 29.0 MB
EGAF50000905762 bam 31.8 MB
EGAF50000905763 bam 32.7 MB
EGAF50000905764 bam 33.1 MB
EGAF50000905765 bam 35.3 MB
EGAF50000905766 bam 51.8 MB
EGAF50000905767 bam 53.5 MB
EGAF50000905768 bam 33.2 MB
EGAF50000905769 bam 35.2 MB
EGAF50000905770 bam 47.9 MB
EGAF50000905771 bam 30.4 MB
EGAF50000905772 bam 50.2 MB
EGAF50000905773 bam 36.9 MB
EGAF50000905774 bam 47.9 MB
EGAF50000905775 bam 37.9 MB
EGAF50000905776 bam 37.6 MB
EGAF50000905777 bam 27.6 MB
EGAF50000905778 bam 34.6 MB
EGAF50000905779 bam 45.7 MB
EGAF50000905780 bam 43.1 MB
EGAF50000905781 bam 66.3 MB
EGAF50000905782 bam 68.6 MB
EGAF50000905783 bam 81.1 MB
EGAF50000905784 bam 67.9 MB
EGAF50000905785 bam 67.1 MB
EGAF50000905786 bam 77.5 MB
EGAF50000905787 bam 75.5 MB
EGAF50000905788 bam 16.4 MB
EGAF50000905789 bam 5.0 MB
EGAF50000905790 bam 4.1 MB
EGAF50000905791 bam 82.3 MB
EGAF50000905792 bam 90.3 MB
EGAF50000905793 bam 85.4 MB
EGAF50000905794 bam 87.6 MB
EGAF50000905795 bam 92.9 MB
EGAF50000905796 bam 76.6 MB
EGAF50000905797 bam 75.5 MB
EGAF50000905798 bam 85.2 MB
EGAF50000905799 bam 69.3 MB
EGAF50000905800 bam 65.1 MB
EGAF50000905801 bam 63.1 MB
EGAF50000905802 bam 62.0 MB
EGAF50000905803 bam 70.5 MB
EGAF50000905804 bam 53.8 MB
EGAF50000905805 bam 80.3 MB
EGAF50000905806 bam 82.4 MB
EGAF50000905807 bam 62.1 MB
EGAF50000905808 bam 76.3 MB
EGAF50000905809 bam 97.9 MB
EGAF50000905810 bam 71.1 MB
EGAF50000905811 bam 82.5 MB
EGAF50000905812 bam 66.5 MB
EGAF50000905813 bam 78.6 MB
EGAF50000905814 bam 77.6 MB
EGAF50000905815 bam 69.8 MB
EGAF50000905816 bam 78.4 MB
EGAF50000905817 bam 75.9 MB
EGAF50000905818 bam 74.3 MB
EGAF50000905819 bam 79.3 MB
EGAF50000905820 bam 77.9 MB
EGAF50000905821 bam 62.2 MB
EGAF50000905822 bam 74.3 MB
EGAF50000905823 bam 68.7 MB
EGAF50000905824 bam 70.9 MB
EGAF50000905825 bam 65.7 MB
EGAF50000905826 bam 74.7 MB
EGAF50000905827 bam 53.4 MB
EGAF50000905828 bam 52.0 MB
EGAF50000905829 bam 56.1 MB
EGAF50000905830 bam 70.4 MB
EGAF50000905831 bam 49.5 MB
EGAF50000905832 bam 51.2 MB
EGAF50000905833 bam 71.1 MB
EGAF50000905834 bam 56.4 MB
EGAF50000905835 bam 58.5 MB
EGAF50000905836 bam 84.5 MB
EGAF50000905837 bam 78.0 MB
EGAF50000905838 bam 77.5 MB
EGAF50000905839 bam 59.3 MB
EGAF50000905840 bam 73.2 MB
EGAF50000905841 bam 79.5 MB
EGAF50000905842 bam 85.1 MB
EGAF50000905843 bam 84.1 MB
EGAF50000905844 bam 76.4 MB
EGAF50000905845 bam 55.5 MB
EGAF50000905846 bam 3.7 MB
EGAF50000905847 bam 2.5 MB
EGAF50000905848 bam 3.6 MB
EGAF50000905849 bam 16.8 MB
EGAF50000905850 bam 12.3 MB
EGAF50000905851 bam 20.8 MB
EGAF50000905852 bam 13.8 MB
EGAF50000905853 bam 5.3 MB
EGAF50000905854 bam 8.8 MB
EGAF50000905855 bam 11.1 MB
EGAF50000905856 bam 5.4 MB
EGAF50000905857 bam 9.8 MB
EGAF50000905858 bam 27.7 MB
EGAF50000905859 bam 20.9 MB
EGAF50000905860 bam 11.4 MB
EGAF50000905861 bam 23.4 MB
EGAF50000905862 bam 16.0 MB
EGAF50000905863 bam 14.5 MB
EGAF50000905864 bam 18.9 MB
EGAF50000905865 bam 30.3 MB
EGAF50000905866 bam 75.7 MB
EGAF50000905867 bam 82.9 MB
EGAF50000905868 bam 87.1 MB
EGAF50000905869 bam 71.2 MB
EGAF50000905870 bam 75.1 MB
EGAF50000905871 bam 72.9 MB
EGAF50000905872 bam 73.6 MB
EGAF50000905873 bam 82.3 MB
EGAF50000905874 bam 84.7 MB
EGAF50000905875 bam 68.7 MB
EGAF50000905876 bam 68.1 MB
EGAF50000905877 bam 75.6 MB
EGAF50000905878 bam 78.6 MB
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EGAF50000905881 bam 78.9 MB
EGAF50000905882 bam 67.2 MB
EGAF50000905883 bam 66.7 MB
EGAF50000905884 bam 87.2 MB
EGAF50000905885 bam 69.9 MB
EGAF50000905886 bam 70.9 MB
EGAF50000905887 bam 67.5 MB
EGAF50000905888 bam 66.7 MB
EGAF50000905889 bam 64.3 MB
EGAF50000905890 bam 77.8 MB
EGAF50000905891 bam 69.1 MB
EGAF50000905892 bam 78.8 MB
EGAF50000905893 bam 81.1 MB
EGAF50000905894 bam 71.9 MB
EGAF50000905895 bam 71.4 MB
EGAF50000905896 bam 75.8 MB
EGAF50000905897 bam 69.5 MB
EGAF50000905898 bam 74.2 MB
EGAF50000905899 bam 80.4 MB
EGAF50000905900 bam 67.8 MB
EGAF50000905901 bam 77.6 MB
EGAF50000905902 bam 72.2 MB
EGAF50000905903 bam 8.1 MB
EGAF50000905904 bam 65.5 MB
EGAF50000905905 bam 69.3 MB
EGAF50000905906 bam 72.6 MB
EGAF50000905907 bam 12.0 MB
EGAF50000905908 bam 68.4 MB
EGAF50000905909 bam 72.9 MB
EGAF50000905910 bam 66.7 MB
EGAF50000905911 bam 65.6 MB
EGAF50000905912 bam 75.4 MB
EGAF50000905913 bam 71.8 MB
EGAF50000905914 bam 71.7 MB
EGAF50000905915 bam 76.5 MB
EGAF50000905916 bam 79.0 MB
EGAF50000905917 bam 73.2 MB
EGAF50000905918 bam 75.1 MB
EGAF50000905919 bam 72.6 MB
EGAF50000905920 bam 83.1 MB
EGAF50000905921 bam 87.6 MB
EGAF50000905922 bam 84.0 MB
EGAF50000905923 bam 88.6 MB
EGAF50000905924 bam 71.4 MB
EGAF50000905925 bam 83.2 MB
EGAF50000905926 bam 77.6 MB
EGAF50000905927 bam 7.6 MB
EGAF50000905928 bam 22.0 MB
EGAF50000905929 bam 8.8 MB
EGAF50000905930 bam 10.1 MB
EGAF50000905931 bam 14.4 MB
EGAF50000905932 bam 14.5 MB
EGAF50000905933 bam 12.5 MB
EGAF50000905934 bam 11.6 MB
EGAF50000905935 bam 17.9 MB
EGAF50000905936 bam 2.9 MB
EGAF50000905937 bam 984.5 kB
EGAF50000905938 bam 1.7 MB
EGAF50000905939 bam 423.6 kB
EGAF50000905940 bam 2.2 MB
EGAF50000905941 bam 14.2 MB
EGAF50000905942 bam 15.3 MB
EGAF50000905943 bam 271.1 kB
EGAF50000905944 bam 6.6 MB
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EGAF50000905951 bam 58.5 MB
EGAF50000905952 bam 83.1 MB
EGAF50000905953 bam 70.1 MB
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EGAF50000905955 bam 63.5 MB
EGAF50000905956 bam 78.2 MB
EGAF50000905957 bam 66.8 MB
EGAF50000905958 bam 69.0 MB
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EGAF50000905960 bam 69.1 MB
EGAF50000905961 bam 85.3 MB
EGAF50000905962 bam 69.7 MB
EGAF50000905963 bam 65.5 MB
EGAF50000905964 bam 70.8 MB
EGAF50000905965 bam 73.9 MB
EGAF50000905966 bam 65.5 MB
EGAF50000905967 bam 77.1 MB
EGAF50000905968 bam 76.9 MB
EGAF50000905969 bam 68.3 MB
EGAF50000905970 bam 66.2 MB
EGAF50000905971 bam 71.0 MB
EGAF50000905972 bam 68.8 MB
EGAF50000905973 bam 73.0 MB
EGAF50000905974 bam 26.2 MB
EGAF50000905975 bam 31.4 MB
EGAF50000905976 bam 23.3 MB
EGAF50000905977 bam 28.1 MB
EGAF50000905978 bam 28.5 MB
EGAF50000905979 bam 33.4 MB
EGAF50000905980 bam 29.4 MB
EGAF50000905981 bam 30.7 MB
EGAF50000905982 bam 19.6 MB
EGAF50000905983 bam 17.9 MB
EGAF50000905984 bam 17.1 MB
EGAF50000905985 bam 27.7 MB
EGAF50000905986 bam 29.7 MB
EGAF50000905987 bam 46.5 MB
EGAF50000905988 bam 11.2 MB
EGAF50000905989 bam 37.0 MB
EGAF50000905990 bam 19.1 MB
EGAF50000905991 bam 46.2 MB
EGAF50000905992 bam 41.9 MB
EGAF50000905993 bam 37.0 MB
EGAF50000905994 bam 51.6 MB
EGAF50000905995 bam 731.0 kB
EGAF50000905996 bam 47.2 MB
EGAF50000905997 bam 28.9 MB
EGAF50000905998 bam 2.6 MB
EGAF50000905999 bam 37.9 MB
EGAF50000906000 bam 35.1 MB
EGAF50000906001 bam 28.4 MB
EGAF50000906002 bam 8.3 MB
EGAF50000906003 bam 4.5 MB
EGAF50000906004 bam 3.4 MB
EGAF50000906005 bam 12.8 MB
EGAF50000906006 bam 3.8 MB
EGAF50000906007 bam 6.9 MB
EGAF50000906008 bam 4.9 MB
EGAF50000906009 bam 51.3 MB
EGAF50000906010 bam 50.1 MB
EGAF50000906011 bam 8.6 MB
EGAF50000906012 bam 35.5 MB
EGAF50000906013 bam 11.7 MB
EGAF50000906014 bam 33.2 MB
EGAF50000906015 bam 68.1 MB
EGAF50000906016 bam 71.7 MB
EGAF50000906017 bam 18.7 MB
EGAF50000906018 bam 13.6 MB
EGAF50000906019 bam 8.6 MB
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EGAF50000906021 bam 5.9 MB
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EGAF50000906025 bam 25.2 MB
EGAF50000906026 bam 74.1 MB
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EGAF50000906028 bam 32.8 MB
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EGAF50000906033 bam 74.3 MB
EGAF50000906034 bam 64.0 MB
EGAF50000906035 bam 69.6 MB
EGAF50000906036 bam 81.1 MB
EGAF50000906037 bam 70.0 MB
EGAF50000906038 bam 77.8 MB
EGAF50000906039 bam 37.4 MB
EGAF50000906040 bam 32.6 MB
EGAF50000906041 bam 29.0 MB
EGAF50000906042 bam 43.4 MB
EGAF50000906043 bam 63.8 MB
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EGAF50000906052 bam 34.2 MB
EGAF50000906053 bam 35.7 MB
EGAF50000906054 bam 75.4 MB
EGAF50000906055 bam 61.2 MB
EGAF50000906056 bam 69.0 MB
EGAF50000906057 bam 75.5 MB
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EGAF50000906059 bam 69.3 MB
EGAF50000906060 bam 11.0 MB
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EGAF50000906063 bam 26.5 MB
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EGAF50000906065 bam 44.6 MB
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EGAF50000906067 bam 6.5 MB
EGAF50000906068 bam 43.6 MB
EGAF50000906069 bam 29.4 MB
EGAF50000906070 bam 25.8 MB
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EGAF50000906072 bam 41.4 MB
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EGAF50000906107 bam 3.8 MB
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EGAF50000906133 bam 56.1 MB
EGAF50000906134 bam 60.4 MB
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EGAF50000906136 bam 42.2 MB
EGAF50000906137 bam 76.1 MB
EGAF50000906138 bam 57.3 MB
EGAF50000906139 bam 67.0 MB
EGAF50000906140 bam 63.3 MB
EGAF50000906141 bam 63.6 MB
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EGAF50000906144 bam 67.4 MB
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EGAF50000906146 bam 51.9 MB
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EGAF50000906148 bam 69.1 MB
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EGAF50000906152 bam 98.8 MB
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EGAF50000906154 bam 50.7 MB
EGAF50000906155 bam 46.5 MB
EGAF50000906156 bam 3.0 MB
EGAF50000906157 bam 2.1 MB
EGAF50000906158 bam 3.4 MB
EGAF50000906159 bam 19.2 MB
EGAF50000906160 bam 41.4 MB
EGAF50000906161 bam 7.6 MB
EGAF50000906162 bam 23.7 MB
EGAF50000906163 bam 14.9 MB
EGAF50000906164 bam 4.4 MB
EGAF50000906165 bam 25.9 MB
EGAF50000906166 bam 15.9 MB
EGAF50000906167 bam 13.8 MB
436 Files (22.2 GB)