About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
Need Help?

scRNA-Seq data from RA donors after therapy

A total of 48 samples from RA donors were profiled with scRNA-Seq. Samples were collected 12 weeks after therapy. Three different therapies were considered: antiTNF, antiIL6R, and JAKi.

Request Access

DUO:0000018
version: 2021-02-23

not for profit, non commercial use only

This data use modifier indicates that use of the data is limited to not-for-profit organizations and not-for-profit use, non-commercial use.

DUO:0000042
version: 2021-02-23

general research use

This data use permission indicates that use is allowed for general research use for any research purpose.

Access to the DoCTIS project data

DoCTIS is the acronym for the EU-funded project entitled “Decision on Combinatorial Therapies in Immune-Mediated diseases using Systems approaches” (grant agreement 848028). DoCTIS is a multicentric project involving diverse basic, applied and clinical international research centres, and is aimed at improving treatment efficacy in six Immune-Mediated Inflammatory Diseases (IMIDs). These IMIDs encompass Crohn’s disease, ulcerative colitis, rheumatoid arthritis, systemic lupus erythematosus, psoriasis and psoriatic arthritis. Through the generation of high volumes of data using high-throughput technologies on samples from well-characterized IMID patients, and the use of advanced systems biology analytical approaches, we aim to identify therapeutic combinations that are much more efficacious and safer than the current single-drug approaches. Access to the sequence data produced by the DoCTIS Consortium is controlled by the DoCTIS Data Access Committee (DAC). Access to data will be granted to qualified investigators for appropriate use. Please email sara.marsal@vhir.org request data access to request data access.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000001952 RNASeq

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000920485 fastq.gz 1.8 GB
EGAF50000920512 fastq.gz 16.5 GB
EGAF50000920513 fastq.gz 4.2 GB
EGAF50000920514 fastq.gz 1.8 GB
EGAF50000920515 fastq.gz 15.4 GB
EGAF50000920516 fastq.gz 4.9 GB
EGAF50000920517 fastq.gz 2.1 GB
EGAF50000920518 fastq.gz 2.1 GB
EGAF50000920519 fastq.gz 6.7 GB
EGAF50000920520 fastq.gz 15.5 GB
EGAF50000920521 fastq.gz 2.4 GB
EGAF50000920522 fastq.gz 5.3 GB
EGAF50000920523 fastq.gz 2.4 GB
EGAF50000920524 fastq.gz 5.2 GB
EGAF50000920525 fastq.gz 7.1 GB
EGAF50000920526 fastq.gz 15.7 GB
EGAF50000920527 fastq.gz 4.1 GB
EGAF50000920528 fastq.gz 13.6 GB
EGAF50000920529 fastq.gz 6.0 GB
EGAF50000920530 fastq.gz 1.7 GB
EGAF50000920531 fastq.gz 3.8 GB
EGAF50000920532 fastq.gz 1.7 GB
EGAF50000920533 fastq.gz 3.8 GB
EGAF50000920534 fastq.gz 5.3 GB
EGAF50000920535 fastq.gz 12.4 GB
EGAF50000920536 fastq.gz 5.3 GB
EGAF50000920537 fastq.gz 12.4 GB
EGAF50000920554 fastq.gz 1.8 GB
EGAF50000920555 fastq.gz 7.1 GB
EGAF50000920556 fastq.gz 6.7 GB
EGAF50000920569 fastq.gz 7.1 GB
EGAF50000920570 fastq.gz 1.9 GB
EGAF50000920571 fastq.gz 13.5 GB
EGAF50000920572 fastq.gz 2.0 GB
EGAF50000920583 fastq.gz 4.3 GB
EGAF50000920584 fastq.gz 7.1 GB
EGAF50000920585 fastq.gz 16.5 GB
EGAF50000920586 fastq.gz 4.9 GB
EGAF50000920587 fastq.gz 6.6 GB
EGAF50000920588 fastq.gz 4.0 GB
EGAF50000920589 fastq.gz 1.8 GB
EGAF50000920590 fastq.gz 4.1 GB
EGAF50000920591 fastq.gz 6.8 GB
EGAF50000920592 fastq.gz 15.5 GB
EGAF50000920593 fastq.gz 6.8 GB
EGAF50000920594 fastq.gz 15.4 GB
EGAF50000920595 fastq.gz 1.7 GB
EGAF50000920596 fastq.gz 3.8 GB
EGAF50000920597 fastq.gz 1.7 GB
EGAF50000920598 fastq.gz 3.8 GB
EGAF50000920599 fastq.gz 15.3 GB
EGAF50000920600 fastq.gz 6.7 GB
EGAF50000920601 fastq.gz 6.7 GB
EGAF50000920602 fastq.gz 15.4 GB
EGAF50000920603 fastq.gz 6.0 GB
EGAF50000920604 fastq.gz 13.6 GB
EGAF50000920605 fastq.gz 15.8 GB
EGAF50000920606 fastq.gz 4.0 GB
EGAF50000920607 fastq.gz 1.9 GB
EGAF50000920608 fastq.gz 3.9 GB
EGAF50000920609 fastq.gz 1.8 GB
EGAF50000920610 fastq.gz 14.8 GB
EGAF50000920611 fastq.gz 6.7 GB
EGAF50000920612 fastq.gz 14.8 GB
EGAF50000920613 fastq.gz 1.8 GB
EGAF50000920614 fastq.gz 3.9 GB
EGAF50000920615 fastq.gz 4.8 GB
EGAF50000920616 fastq.gz 2.2 GB
EGAF50000920617 fastq.gz 6.5 GB
EGAF50000920618 fastq.gz 14.7 GB
EGAF50000920619 fastq.gz 2.2 GB
EGAF50000920620 fastq.gz 4.8 GB
EGAF50000920621 fastq.gz 6.5 GB
EGAF50000920622 fastq.gz 14.7 GB
EGAF50000920623 fastq.gz 5.9 GB
EGAF50000920624 fastq.gz 13.7 GB
EGAF50000920625 fastq.gz 4.5 GB
EGAF50000920626 fastq.gz 2.0 GB
EGAF50000920627 fastq.gz 4.4 GB
EGAF50000920628 fastq.gz 5.9 GB
EGAF50000920629 fastq.gz 13.7 GB
EGAF50000920630 fastq.gz 6.0 GB
EGAF50000920631 fastq.gz 6.0 GB
EGAF50000920632 fastq.gz 13.6 GB
EGAF50000920633 fastq.gz 1.8 GB
EGAF50000920634 fastq.gz 3.9 GB
EGAF50000920635 fastq.gz 3.9 GB
EGAF50000920636 fastq.gz 1.8 GB
EGAF50000920637 fastq.gz 13.4 GB
EGAF50000920638 fastq.gz 31.6 GB
EGAF50000920639 fastq.gz 13.5 GB
EGAF50000920640 fastq.gz 31.8 GB
EGAF50000921290 txt 139.0 MB
EGAF50000921291 csv 103.0 kB
94 Files (691.2 GB)