Raw snRNA-seq and Visium sequencing reads supporting Victori et al. Cell Reports Medicine

Controlled-access raw sequencing reads from human patient-derived LEAP TNBC samples used in Victori et al.; snRNA-seq data are from multiplexed sequencing pools and may contain additional LEAP samples co-multiplexed with the manuscript samples.

22/07/2026
146 samples
DAC: EGAC50000001072
Technology: unspecified

Archive: European Genome-phenome Archive (EGA)

Access Policy1 Study Files

Metadata

Request Access

Controlled access policy for Wellcome LEAP TNBC sequencing data

Access to this dataset is controlled by the Wellcome LEAP TNBC Data Access Committee. The dataset contains human patient-derived sequencing data generated as part of the Wellcome LEAP triple-negative breast cancer study. Access is available only for approved research use and is subject to review by the Data Access Committee. Applications will be assessed for consistency with participant consent, ethical approval, institutional governance requirements, and the proposed scientific use. Approved applicants may be required to complete a Data Access Agreement before access is granted. Users must not attempt to identify or contact research participants, must not redistribute the data to unauthorised individuals or third parties, and must use the data only for the approved research purpose. Any publications or outputs arising from use of the data should acknowledge the Wellcome LEAP study and cite the relevant publication and EGA accession. Access may be withdrawn if the terms of use are breached.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID	Study Title	Study Type
EGAS50000001956	Wellcome LEAP TNBC cohort raw sequencing data	Transcriptome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID	File Type	Size
EGAF50000921748	fastq.gz	18.7 GB
EGAF50000921749	fastq.gz	9.7 GB
EGAF50000921750	fastq.gz	9.6 GB
EGAF50000921751	fastq.gz	3.5 GB
EGAF50000921752	fastq.gz	11.8 GB
EGAF50000921753	fastq.gz	8.4 GB
EGAF50000921754	fastq.gz	9.6 GB
EGAF50000921755	fastq.gz	3.3 GB
EGAF50000921756	fastq.gz	5.0 GB
EGAF50000921757	fastq.gz	6.7 GB
EGAF50000921758	fastq.gz	11.4 GB
EGAF50000921759	fastq.gz	16.7 GB
EGAF50000921760	fastq.gz	14.4 GB
EGAF50000921761	fastq.gz	21.6 GB
EGAF50000921762	fastq.gz	4.5 GB
EGAF50000921763	fastq.gz	1.6 GB
EGAF50000921764	fastq.gz	2.4 GB
EGAF50000921765	fastq.gz	3.6 GB
EGAF50000921766	fastq.gz	12.3 GB
EGAF50000921767	fastq.gz	9.9 GB
EGAF50000921768	fastq.gz	7.7 GB
EGAF50000921769	fastq.gz	11.7 GB
EGAF50000921770	fastq.gz	15.7 GB
EGAF50000921771	fastq.gz	23.0 GB
EGAF50000921772	fastq.gz	1.7 GB
EGAF50000921773	fastq.gz	2.6 GB
EGAF50000921774	fastq.gz	19.1 GB
EGAF50000921775	fastq.gz	28.6 GB
EGAF50000921776	fastq.gz	3.8 GB
EGAF50000921777	fastq.gz	31.3 GB
EGAF50000921778	fastq.gz	15.0 GB
EGAF50000921779	fastq.gz	41.3 GB
EGAF50000921780	fastq.gz	20.8 GB
EGAF50000921781	fastq.gz	11.4 GB
EGAF50000921782	fastq.gz	8.2 GB
EGAF50000921783	fastq.gz	12.1 GB
EGAF50000921784	fastq.gz	5.7 GB
EGAF50000921785	fastq.gz	5.1 GB
EGAF50000921786	fastq.gz	7.7 GB
EGAF50000921787	fastq.gz	5.1 GB
EGAF50000921788	fastq.gz	7.4 GB
EGAF50000921789	fastq.gz	10.1 GB
EGAF50000921790	fastq.gz	11.4 GB
EGAF50000921791	fastq.gz	16.6 GB
EGAF50000921792	fastq.gz	3.6 GB
EGAF50000921793	fastq.gz	5.7 GB
EGAF50000921794	fastq.gz	20.2 GB
EGAF50000921795	fastq.gz	8.3 GB
EGAF50000921796	fastq.gz	7.8 GB
EGAF50000921797	fastq.gz	17.3 GB
EGAF50000921798	fastq.gz	9.4 GB
EGAF50000921799	fastq.gz	13.9 GB
EGAF50000921800	fastq.gz	2.9 GB
EGAF50000921801	fastq.gz	4.2 GB
EGAF50000921802	fastq.gz	124.6 MB
EGAF50000921803	fastq.gz	188.4 MB
EGAF50000921804	fastq.gz	5.4 GB
EGAF50000921805	fastq.gz	18.0 GB
EGAF50000921806	fastq.gz	9.4 GB
EGAF50000921807	fastq.gz	22.2 GB
EGAF50000921808	fastq.gz	19.3 GB
EGAF50000921809	fastq.gz	6.5 GB
EGAF50000921810	fastq.gz	17.4 GB
EGAF50000921811	fastq.gz	2.5 GB
EGAF50000921812	fastq.gz	6.7 GB
EGAF50000921813	fastq.gz	9.0 GB
EGAF50000921814	fastq.gz	2.3 GB
EGAF50000921815	fastq.gz	5.5 GB
EGAF50000921816	fastq.gz	15.2 GB
EGAF50000921817	fastq.gz	18.6 GB
EGAF50000921818	fastq.gz	6.2 GB
EGAF50000921819	fastq.gz	14.5 GB
EGAF50000921820	fastq.gz	8.7 GB
EGAF50000921821	fastq.gz	19.5 GB
EGAF50000921822	fastq.gz	20.8 GB
EGAF50000921823	fastq.gz	13.8 GB
EGAF50000921824	fastq.gz	320.5 MB
EGAF50000921825	fastq.gz	487.5 MB
EGAF50000921826	fastq.gz	8.0 GB
EGAF50000921827	fastq.gz	7.2 GB
EGAF50000921828	fastq.gz	16.7 GB
EGAF50000921829	fastq.gz	9.7 GB
EGAF50000921830	fastq.gz	22.8 GB
EGAF50000921831	fastq.gz	14.9 GB
EGAF50000921832	fastq.gz	15.7 GB
EGAF50000921833	fastq.gz	10.2 GB
EGAF50000921834	fastq.gz	24.0 GB
EGAF50000921835	fastq.gz	7.8 GB
EGAF50000921836	fastq.gz	16.8 GB
EGAF50000921837	fastq.gz	7.3 GB
EGAF50000921838	fastq.gz	16.0 GB
EGAF50000921839	fastq.gz	9.1 GB
EGAF50000921840	fastq.gz	21.9 GB
EGAF50000921841	fastq.gz	6.1 GB
EGAF50000921842	fastq.gz	14.3 GB
EGAF50000921843	fastq.gz	13.5 GB
EGAF50000921844	fastq.gz	4.3 GB
EGAF50000921845	fastq.gz	9.7 GB
EGAF50000921846	fastq.gz	9.5 GB
EGAF50000921847	fastq.gz	6.5 GB
EGAF50000921848	fastq.gz	14.0 GB
EGAF50000921849	fastq.gz	6.8 GB
EGAF50000921850	fastq.gz	16.0 GB
EGAF50000921851	fastq.gz	6.3 GB
EGAF50000921852	fastq.gz	15.0 GB
EGAF50000921853	fastq.gz	13.5 GB
EGAF50000921854	fastq.gz	10.7 GB
EGAF50000921855	fastq.gz	4.1 GB
EGAF50000921856	fastq.gz	9.3 GB
EGAF50000921857	fastq.gz	4.5 GB
EGAF50000921858	fastq.gz	9.7 GB
EGAF50000921859	fastq.gz	4.0 GB
EGAF50000921860	fastq.gz	9.5 GB
EGAF50000921861	fastq.gz	6.3 GB
EGAF50000921862	fastq.gz	14.9 GB
EGAF50000921863	fastq.gz	9.0 GB
EGAF50000921864	fastq.gz	21.2 GB
EGAF50000921865	fastq.gz	3.9 GB
EGAF50000921866	fastq.gz	8.9 GB
EGAF50000921867	fastq.gz	8.8 GB
EGAF50000921868	fastq.gz	4.3 GB
EGAF50000921869	fastq.gz	4.3 GB
EGAF50000921870	fastq.gz	10.0 GB
EGAF50000921871	fastq.gz	10.1 GB
EGAF50000921872	fastq.gz	3.8 GB
EGAF50000921873	fastq.gz	8.5 GB
EGAF50000921874	fastq.gz	8.7 GB
EGAF50000921875	fastq.gz	4.5 GB
EGAF50000921876	fastq.gz	4.5 GB
EGAF50000921877	fastq.gz	10.3 GB
EGAF50000921878	fastq.gz	10.5 GB
EGAF50000921879	fastq.gz	4.7 GB
EGAF50000921880	fastq.gz	4.8 GB
EGAF50000921881	fastq.gz	11.4 GB
EGAF50000921882	fastq.gz	11.3 GB
EGAF50000921883	fastq.gz	10.2 GB
EGAF50000921884	fastq.gz	10.2 GB
EGAF50000921885	fastq.gz	4.0 GB
EGAF50000921886	fastq.gz	4.1 GB
EGAF50000921887	fastq.gz	9.1 GB
EGAF50000921888	fastq.gz	9.3 GB
EGAF50000921889	fastq.gz	3.9 GB
EGAF50000921890	fastq.gz	3.9 GB
EGAF50000921891	fastq.gz	8.9 GB
EGAF50000921892	fastq.gz	8.9 GB
EGAF50000921893	fastq.gz	5.0 GB
EGAF50000921894	fastq.gz	11.3 GB
EGAF50000921895	fastq.gz	5.0 GB
EGAF50000921896	fastq.gz	5.0 GB
EGAF50000921897	fastq.gz	11.5 GB
EGAF50000921898	fastq.gz	3.0 GB
EGAF50000921899	fastq.gz	7.3 GB
EGAF50000921900	fastq.gz	7.4 GB
EGAF50000921901	fastq.gz	5.2 GB
EGAF50000921902	fastq.gz	12.0 GB
EGAF50000921903	fastq.gz	12.1 GB
EGAF50000921904	fastq.gz	3.5 GB
EGAF50000921905	fastq.gz	3.6 GB
EGAF50000921906	fastq.gz	8.0 GB
EGAF50000921907	fastq.gz	8.1 GB
EGAF50000921908	fastq.gz	4.4 GB
EGAF50000921909	fastq.gz	4.4 GB
EGAF50000921910	fastq.gz	10.6 GB
EGAF50000921911	fastq.gz	10.6 GB
EGAF50000921912	fastq.gz	5.1 GB
EGAF50000921913	fastq.gz	11.8 GB
EGAF50000921914	fastq.gz	11.8 GB
EGAF50000921915	fastq.gz	5.0 GB
EGAF50000921916	fastq.gz	11.5 GB
EGAF50000921917	fastq.gz	11.5 GB
EGAF50000921918	fastq.gz	5.6 GB
EGAF50000921919	fastq.gz	13.1 GB
EGAF50000921920	fastq.gz	4.5 GB
EGAF50000921921	fastq.gz	4.5 GB
EGAF50000921922	fastq.gz	11.2 GB
EGAF50000921923	fastq.gz	4.2 GB
EGAF50000921924	fastq.gz	9.4 GB
EGAF50000921925	fastq.gz	4.7 GB
EGAF50000921926	fastq.gz	4.7 GB
EGAF50000921927	fastq.gz	11.4 GB
EGAF50000921928	fastq.gz	11.5 GB
EGAF50000921929	fastq.gz	4.7 GB
EGAF50000921930	fastq.gz	4.7 GB
EGAF50000921931	fastq.gz	11.1 GB
EGAF50000921932	fastq.gz	11.0 GB
EGAF50000921933	fastq.gz	5.0 GB
EGAF50000921934	fastq.gz	11.5 GB
EGAF50000921935	fastq.gz	11.5 GB
EGAF50000921936	fastq.gz	3.8 GB
EGAF50000921937	fastq.gz	9.2 GB
EGAF50000921938	fastq.gz	9.4 GB
EGAF50000921939	fastq.gz	10.7 GB
EGAF50000921940	fastq.gz	10.9 GB
EGAF50000921941	fastq.gz	4.7 GB
EGAF50000921942	fastq.gz	4.7 GB
EGAF50000921943	fastq.gz	10.8 GB
EGAF50000921944	fastq.gz	10.8 GB
EGAF50000921945	fastq.gz	4.3 GB
EGAF50000921946	fastq.gz	4.3 GB
EGAF50000921947	fastq.gz	10.2 GB
EGAF50000921948	fastq.gz	10.2 GB
EGAF50000921949	fastq.gz	4.3 GB
EGAF50000921950	fastq.gz	11.0 GB
EGAF50000921951	fastq.gz	10.7 GB
EGAF50000921952	fastq.gz	5.1 GB
EGAF50000921953	fastq.gz	5.0 GB
EGAF50000921954	fastq.gz	12.4 GB
EGAF50000921955	fastq.gz	12.2 GB
EGAF50000921956	fastq.gz	4.3 GB
EGAF50000921957	fastq.gz	4.6 GB
EGAF50000921958	fastq.gz	4.6 GB
EGAF50000921959	fastq.gz	10.7 GB
EGAF50000921960	fastq.gz	10.7 GB
EGAF50000921961	fastq.gz	4.5 GB
EGAF50000921962	fastq.gz	4.4 GB
EGAF50000921963	fastq.gz	11.3 GB
EGAF50000921964	fastq.gz	11.1 GB
EGAF50000921965	fastq.gz	4.3 GB
EGAF50000921966	fastq.gz	4.3 GB
EGAF50000921967	fastq.gz	10.3 GB
EGAF50000921968	fastq.gz	10.4 GB
EGAF50000921969	fastq.gz	3.5 GB
EGAF50000921970	fastq.gz	3.5 GB
EGAF50000921971	fastq.gz	9.0 GB
EGAF50000921972	fastq.gz	11.4 GB
EGAF50000921973	fastq.gz	3.3 GB
EGAF50000921974	fastq.gz	3.2 GB
EGAF50000921975	fastq.gz	7.0 GB
EGAF50000921976	fastq.gz	4.7 GB
EGAF50000921977	fastq.gz	8.9 GB
EGAF50000921978	fastq.gz	11.3 GB
EGAF50000921979	fastq.gz	4.9 GB
EGAF50000921980	fastq.gz	9.8 GB
EGAF50000921981	fastq.gz	8.6 GB
EGAF50000921982	fastq.gz	4.1 GB
EGAF50000921983	fastq.gz	8.9 GB
EGAF50000921984	fastq.gz	9.2 GB
EGAF50000921985	fastq.gz	5.3 GB
EGAF50000921986	fastq.gz	11.7 GB
EGAF50000921987	fastq.gz	4.5 GB
EGAF50000921988	fastq.gz	5.0 GB
EGAF50000921989	fastq.gz	10.7 GB
EGAF50000921990	fastq.gz	5.1 GB
EGAF50000921991	fastq.gz	5.0 GB
EGAF50000921992	fastq.gz	10.6 GB
EGAF50000921993	fastq.gz	4.7 GB
EGAF50000921994	fastq.gz	4.6 GB
EGAF50000921995	fastq.gz	10.1 GB
EGAF50000921996	fastq.gz	9.8 GB
EGAF50000921997	fastq.gz	1.5 GB
EGAF50000921998	fastq.gz	10.0 GB
EGAF50000921999	fastq.gz	4.3 GB
EGAF50000922000	fastq.gz	8.9 GB
EGAF50000922001	fastq.gz	10.2 GB
EGAF50000922002	fastq.gz	21.1 kB
EGAF50000922003	fastq.gz	5.6 GB
EGAF50000922004	fastq.gz	12.5 GB
EGAF50000922005	fastq.gz	12.2 GB
EGAF50000922006	fastq.gz	5.0 GB
EGAF50000922007	fastq.gz	5.0 GB
EGAF50000922008	fastq.gz	10.7 GB
EGAF50000922009	fastq.gz	10.9 GB
EGAF50000922010	fastq.gz	5.7 GB
EGAF50000922011	fastq.gz	5.7 GB
EGAF50000922012	fastq.gz	12.3 GB
EGAF50000922013	fastq.gz	12.2 GB
EGAF50000922014	fastq.gz	2.3 GB
EGAF50000922015	fastq.gz	15.7 GB
EGAF50000922016	fastq.gz	4.8 GB
EGAF50000922017	fastq.gz	10.7 GB
EGAF50000922018	fastq.gz	5.1 GB
EGAF50000922019	fastq.gz	10.5 GB
EGAF50000922020	fastq.gz	3.8 GB
EGAF50000922021	fastq.gz	4.2 GB
EGAF50000922022	fastq.gz	16.5 GB
EGAF50000922023	fastq.gz	24.2 GB
EGAF50000922024	fastq.gz	1.7 GB
EGAF50000922025	fastq.gz	18.9 GB
EGAF50000922026	fastq.gz	39.2 GB
EGAF50000922027	fastq.gz	2.2 GB
EGAF50000922028	fastq.gz	2.7 GB
EGAF50000922029	fastq.gz	9.3 GB
EGAF50000922030	fastq.gz	4.6 GB
EGAF50000922031	fastq.gz	18.0 GB
EGAF50000922032	fastq.gz	4.0 GB
EGAF50000922033	fastq.gz	6.0 GB
EGAF50000922034	fastq.gz	7.8 GB
EGAF50000922035	fastq.gz	4.8 GB
EGAF50000922036	fastq.gz	4.9 GB
EGAF50000922037	fastq.gz	10.6 GB
EGAF50000922038	fastq.gz	10.6 GB
EGAF50000922039	fastq.gz	5.0 GB
EGAF50000922040	fastq.gz	10.6 GB
EGAF50000922041	fastq.gz	9.9 GB
EGAF50000922042	fastq.gz	7.1 GB
EGAF50000922043	fastq.gz	7.8 GB
EGAF50000922044	fastq.gz	16.5 GB
EGAF50000922045	fastq.gz	7.9 GB
EGAF50000922046	fastq.gz	2.6 GB
EGAF50000922047	fastq.gz	21.2 GB
EGAF50000922048	fastq.gz	3.8 GB
EGAF50000922049	fastq.gz	7.9 GB
EGAF50000922050	fastq.gz	3.1 GB
EGAF50000922051	fastq.gz	6.6 GB
EGAF50000922052	fastq.gz	23.4 GB
EGAF50000922053	fastq.gz	3.2 GB
EGAF50000922054	fastq.gz	13.6 GB
EGAF50000922055	fastq.gz	12.9 GB
EGAF50000922056	fastq.gz	26.4 kB
EGAF50000922057	fastq.gz	10.9 GB
EGAF50000922058	fastq.gz	7.7 GB
EGAF50000922059	fastq.gz	5.8 GB
EGAF50000922060	fastq.gz	4.6 GB
EGAF50000922061	fastq.gz	4.7 GB
EGAF50000922062	fastq.gz	4.3 GB
EGAF50000922063	fastq.gz	21.5 GB
EGAF50000922064	fastq.gz	14.2 GB
EGAF50000922065	fastq.gz	20.1 GB
EGAF50000922066	fastq.gz	5.1 GB
EGAF50000922067	fastq.gz	18.4 GB
EGAF50000922068	fastq.gz	8.1 GB
EGAF50000922069	fastq.gz	11.3 GB
EGAF50000922070	fastq.gz	3.8 GB
EGAF50000922071	fastq.gz	9.4 GB
EGAF50000922072	fastq.gz	8.0 GB
EGAF50000922073	fastq.gz	3.0 GB
EGAF50000922074	fastq.gz	4.4 GB
EGAF50000922075	fastq.gz	3.6 GB
EGAF50000922076	fastq.gz	7.4 GB
EGAF50000922077	fastq.gz	4.5 GB
EGAF50000922078	fastq.gz	8.8 GB
EGAF50000922079	fastq.gz	6.6 GB
EGAF50000922080	fastq.gz	5.8 GB
EGAF50000922081	fastq.gz	11.5 GB
EGAF50000922082	fastq.gz	5.1 GB
EGAF50000922083	fastq.gz	3.9 GB
EGAF50000922084	fastq.gz	4.8 GB
EGAF50000922085	fastq.gz	4.8 GB
EGAF50000922086	fastq.gz	10.9 GB
EGAF50000922087	fastq.gz	4.1 GB
EGAF50000922088	fastq.gz	9.2 GB
EGAF50000922089	fastq.gz	5.1 GB
EGAF50000922090	fastq.gz	11.5 GB
EGAF50000922091	fastq.gz	4.4 GB
EGAF50000922092	fastq.gz	9.9 GB
EGAF50000922093	fastq.gz	3.8 GB
EGAF50000922094	fastq.gz	5.2 GB
EGAF50000922095	fastq.gz	13.1 GB
EGAF50000922096	fastq.gz	5.0 GB
EGAF50000922097	fastq.gz	4.1 GB
EGAF50000922098	fastq.gz	6.8 GB
EGAF50000922099	fastq.gz	11.2 GB
EGAF50000922100	fastq.gz	4.3 GB
EGAF50000922101	fastq.gz	4.3 GB
EGAF50000922102	fastq.gz	9.0 GB
EGAF50000922103	fastq.gz	4.6 GB
EGAF50000922104	fastq.gz	9.3 GB
EGAF50000922105	fastq.gz	4.9 GB
EGAF50000922106	fastq.gz	26.0 GB
EGAF50000922107	fastq.gz	6.4 GB
EGAF50000922108	fastq.gz	19.8 GB
EGAF50000922109	fastq.gz	13.6 GB
EGAF50000922110	fastq.gz	2.5 GB
EGAF50000922111	fastq.gz	356.6 MB
EGAF50000922112	fastq.gz	535.9 MB
EGAF50000922113	fastq.gz	4.2 GB
EGAF50000922114	fastq.gz	6.2 GB
EGAF50000922115	fastq.gz	2.4 GB
EGAF50000922116	fastq.gz	17.7 GB
EGAF50000922117	fastq.gz	22.2 GB
EGAF50000922118	fastq.gz	8.3 GB
EGAF50000922119	fastq.gz	7.8 GB
EGAF50000922120	fastq.gz	16.9 GB
EGAF50000922121	fastq.gz	6.4 GB
EGAF50000922122	fastq.gz	8.6 GB
EGAF50000922123	fastq.gz	5.8 GB
EGAF50000922124	fastq.gz	4.5 GB
EGAF50000922125	fastq.gz	4.5 GB
EGAF50000922126	fastq.gz	5.0 GB
EGAF50000922127	fastq.gz	9.5 GB
EGAF50000922128	fastq.gz	3.1 GB
EGAF50000922129	fastq.gz	7.5 GB
EGAF50000922130	fastq.gz	3.9 GB
EGAF50000922131	fastq.gz	36.3 GB
EGAF50000922132	fastq.gz	4.4 GB
EGAF50000922133	fastq.gz	8.6 GB
EGAF50000922134	fastq.gz	5.6 GB
EGAF50000922135	fastq.gz	20.1 GB
EGAF50000922136	fastq.gz	9.2 GB
EGAF50000922137	fastq.gz	4.4 GB
EGAF50000922138	fastq.gz	4.4 GB
EGAF50000922139	fastq.gz	4.2 GB
EGAF50000922140	fastq.gz	19.9 GB
EGAF50000922141	fastq.gz	3.7 GB
EGAF50000922142	fastq.gz	8.9 GB
EGAF50000922143	fastq.gz	5.0 GB
396 Files (3.6 TB)