About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Reticulated and Mature Platelets in Chronic and Acute Coronary Syndromes

Reticulated and Mature Platelets in Chronic and Acute Coronary Syndromes: totalRNA and smRNA fastq files and count matrices

Request Access

DUO:0000019
version: 2021-02-23

publication required

This data use modifier indicates that requestor agrees to make results of studies using the data available to the larger scientific community.

DUO:0000020
version: 2021-02-23

collaboration required

This data use modifier indicates that the requestor must agree to collaboration with the primary study investigator(s).

DUO:0000021
version: 2021-02-23

ethics approval required

This data use modifier indicates that the requestor must provide documentation of local IRB/ERB approval.

DUO:0000024
version: 2021-02-23

publication moratorium

This data use modifier indicates that requestor agrees not to publish results of studies until a specific date.

DUO:0000044
version: 2021-02-23

population origins or ancestry research prohibited

This data use modifier indicates use for purposes of population, origin, or ancestry research is prohibited.

Policy for Reticulated platelets across coronary syndromes

DATA ACCESS AGREEMENT These terms and conditions govern access to the managed access datasets (details of which are set out in Appendix I) to which the User Institution has requested access. The User Institution agrees to be bound by these terms and conditions. Definitions Authorised Personnel: The individuals at the User Institution to whom the Clinic for Internal Medicine I Cardiology at the TU Munich grants access to the Data. This includes the User, the individuals listed in Appendix II and any other individuals for whom the User Institution subsequently requests access to the Data. Details of the initial Authorised Personnel are set out in Appendix II. Data: The managed access datasets to which the User Institution has requested access. Data Producers: The Clinic for Internal Medicine I Cardiology at the TU Munich and the collaborators listed in Appendix I responsible for the development, organisation, and oversight of these Data. External Collaborator: A collaborator of the User, working for an institution other than the User Institution. Project: The project for which the User Institution has requested access to these Data. A description of the Project is set out in Appendix II. Publications: Includes, without limitation, articles published in print journals, electronic journals, reviews, books, posters and other written and verbal presentations of research. Research Participant: An individual whose data form part of these Data. Research Purposes: Shall mean research that is seeking to advance the understanding of genetics and genomics, including the treatment of disorders, and work on statistical methods that may be applied to such research. User: The principal investigator for the Project. User Institution(s): The Institution that has requested access to the Data. Clinic for Internal Medicine I Cardiology at the TU Munich: Klinikum rechts der Isar der Technischen Universität München, Ismaninger Straße 22, 81675 München 1. The User Institution agrees to only use these Data for the purpose of the Project (described in Appendix II) and only for Research Purposes. The User Institution further agrees that it will only use these Data for Research Purposes which are within the limitations (if any) set out in Appendix I. 2. The User Institution agrees to preserve, at all times, the confidentiality of these Data. In particular, it undertakes not to use, or attempt to use these Data to compromise or otherwise infringe the confidentiality of information on Research Participants. Without prejudice to the generality of the foregoing, the User Institution agrees to use at least the measures set out in Appendix I to protect these Data. 3. The User Institution agrees to protect the confidentiality of Research Participants in any research papers or publications that they prepare by taking all reasonable care to limit the possibility of identification. 4. The User Institution agrees not to link or combine these Data to other information or archived data available in a way that could re-identify the Research Participants, even if access to that data has been formally granted to the User Institution or is freely available without restriction. 5. The User Institution agrees only to transfer or disclose these Data, in whole or part, or any material derived from these Data, to the Authorised Personnel. Should the User Institution wish to share these Data with an External Collaborator, the External Collaborator must complete a separate application for access to these Data. 6. The User Institution agrees that the Data Producers, and all other parties involved in the creation, funding or protection of these Data: a) make no warranty or representation, express or implied as to the accuracy, quality or comprehensiveness of these Data; b) exclude to the fullest extent permitted by law all liability for actions, claims, proceedings, demands, losses (including but not limited to loss of profit), costs, awards damages and payments made by the Recipient that may arise (whether directly or indirectly) in any way whatsoever from the Recipient’s use of these Data or from the unavailability of, or break in access to, these Data for whatever reason and; c) bear no responsibility for the further analysis or interpretation of these Data. 7. The User Institution agrees to follow the Fort Lauderdale Guidelines (http://www.wellcome.ac.uk/stellent/groups/corporatesite/@policy_communications/documents/web_document/wtd003207.pdf ) and the Toronto Statement (http://www.nature.com/nature/journal/v461/n7261/full/461168a.html). This includes but is not limited to recognising the contribution of the Data Producers and including a proper acknowledgement in all reports or publications resulting from the use of these Data. 8. The User Institution agrees to follow the Publication Policy in Appendix III. This includes respecting the moratorium period for the Data Producers to publish the first peer-reviewed report describing and analysing these Data. 9. The User Institution agrees not to make intellectual property claims on these Data and not to use intellectual property protection in ways that would prevent or block access to, or use of, any element of these Data, or conclusion drawn directly from these Data. 10. The User Institution can elect to perform further research that would add intellectual and resource capital to these data and decide to obtain intellectual property rights on these downstream discoveries. In this case, the User Institution agrees to implement licensing policies that will not obstruct further research and to follow the U.S. National Institutes of Health Best Practices for the Licensing of Genomic Inventions (2005) (https://www.icgc.org/files/daco/NIH_BestPracticesLicensingGenomicInventions_2005_en.pdf ) in conformity with the Organisation for Economic Co-operation and Development Guidelines for the Licensing of the Genetic Inventions (2006) (http://www.oecd.org/science/biotech/36198812.pdf ). 11. The User Institution agrees to destroy/discard the Data held, once it is no longer used for the Project, unless obliged to retain the data for archival purposes in conformity with audit or legal requirements. 12. The User Institution will notify the Clinic for Internal Medicine I Cardiology at the TU Munich within 30 days of any changes or departures of Authorised Personnel. 13. The User Institution will notify the Clinic for Internal Medicine I Cardiology at the TU Munich prior to any significant changes to the protocol for the Project. 14. The User Institution will notify the Clinic for Internal Medicine I Cardiology at the TU Munich as soon as it becomes aware of a breach of the terms or conditions of this agreement. 15. The Clinic for Internal Medicine I Cardiology at the TU Munich may terminate this agreement by written notice to the User Institution. If this agreement terminates for any reason, the User Institution will be required to destroy any Data held, including copies and backup copies. This clause does not prevent the User Institution from retaining these data for archival purpose in conformity with audit or legal requirements. 16. The User Institution accepts that it may be necessary for the Data Producers to alter the terms of this agreement from time to time. As an example, this may include specific provisions relating to the Data required by Data Producers other than the Clinic for Internal Medicine I Cardiology at the TU Munich. In the event that changes are required, the Data Producers or their appointed agent will contact the User Institution to inform it of the changes and the User Institution may elect to accept the changes or terminate the agreement. 17. If requested, the User Institution will allow data security and management documentation to be inspected to verify that it is complying with the terms of this agreement. 18. The User Institution agrees to distribute a copy of these terms to the Authorised Personnel. The User Institution will procure that the Authorised Personnel comply with the terms of this agreement. 19. The User has to follow the General Data Protection Regulation (GDPR) as issued by the European Union (2016/679). If the User's institution is not part of the European Union, an appropriate Data Protection Policy has to be issued by the User, which will be checked by the legal and data privacy department of the TU Munich. 20. This agreement (and any dispute, controversy, proceedings or claim of whatever nature arising out of this agreement or its formation) shall be construed, interpreted and governed by the laws of Germany and shall be subject to the exclusive jurisdiction of the German courts.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000002013 RNASeq
EGAS50000002014 RNASeq
EGAS50000002015 RNASeq
EGAS50000002016 RNASeq

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000312359 fastq.gz 2.7 GB
EGAF50000312360 fastq.gz 2.8 GB
EGAF50000312361 fastq.gz 2.9 GB
EGAF50000312362 fastq.gz 2.9 GB
EGAF50000312363 fastq.gz 3.4 GB
EGAF50000312364 fastq.gz 323.3 MB
EGAF50000312365 fastq.gz 381.5 MB
EGAF50000312366 fastq.gz 2.7 GB
EGAF50000312367 fastq.gz 372.0 MB
EGAF50000312368 fastq.gz 319.8 MB
EGAF50000312369 fastq.gz 348.2 MB
EGAF50000312370 fastq.gz 261.4 MB
EGAF50000312371 fastq.gz 409.9 MB
EGAF50000312372 fastq.gz 341.5 MB
EGAF50000312373 fastq.gz 343.9 MB
EGAF50000312374 fastq.gz 319.2 MB
EGAF50000312375 fastq.gz 339.6 MB
EGAF50000312376 fastq.gz 301.6 MB
EGAF50000312377 fastq.gz 368.5 MB
EGAF50000312378 fastq.gz 304.4 MB
EGAF50000312379 fastq.gz 330.2 MB
EGAF50000312380 fastq.gz 2.4 GB
EGAF50000312381 fastq.gz 2.4 GB
EGAF50000312382 fastq.gz 2.6 GB
EGAF50000312383 fastq.gz 339.1 MB
EGAF50000312384 fastq.gz 321.1 MB
EGAF50000312385 fastq.gz 346.4 MB
EGAF50000312386 fastq.gz 319.0 MB
EGAF50000312387 fastq.gz 348.0 MB
EGAF50000312388 fastq.gz 1.7 GB
EGAF50000312389 fastq.gz 1.8 GB
EGAF50000312390 fastq.gz 1.7 GB
EGAF50000312391 fastq.gz 385.4 MB
EGAF50000312392 fastq.gz 318.4 MB
EGAF50000312393 fastq.gz 313.5 MB
EGAF50000312394 fastq.gz 397.9 MB
EGAF50000312395 fastq.gz 295.7 MB
EGAF50000312396 fastq.gz 371.8 MB
EGAF50000312397 fastq.gz 364.2 MB
EGAF50000312398 fastq.gz 314.3 MB
EGAF50000312399 fastq.gz 2.8 GB
EGAF50000312400 fastq.gz 2.8 GB
EGAF50000312401 fastq.gz 2.7 GB
EGAF50000312402 fastq.gz 2.7 GB
EGAF50000312403 fastq.gz 2.5 GB
EGAF50000312404 fastq.gz 4.4 GB
EGAF50000312405 fastq.gz 2.9 GB
EGAF50000312406 fastq.gz 2.9 GB
EGAF50000312407 fastq.gz 3.0 GB
EGAF50000312408 fastq.gz 3.5 GB
EGAF50000312409 fastq.gz 3.2 GB
EGAF50000312410 fastq.gz 3.3 GB
EGAF50000312411 fastq.gz 471.1 MB
EGAF50000312412 fastq.gz 338.7 MB
EGAF50000312413 fastq.gz 331.4 MB
EGAF50000312414 fastq.gz 368.8 MB
EGAF50000312415 fastq.gz 342.9 MB
EGAF50000312416 fastq.gz 328.2 MB
EGAF50000312417 fastq.gz 306.8 MB
EGAF50000312418 fastq.gz 2.5 GB
EGAF50000312419 fastq.gz 1.9 GB
EGAF50000312420 fastq.gz 2.5 GB
EGAF50000312421 fastq.gz 2.3 GB
EGAF50000312422 fastq.gz 1.9 GB
EGAF50000312423 fastq.gz 1.9 GB
EGAF50000312424 fastq.gz 3.3 GB
EGAF50000312425 fastq.gz 2.4 GB
EGAF50000312426 fastq.gz 2.3 GB
EGAF50000312427 fastq.gz 2.7 GB
EGAF50000312428 fastq.gz 2.6 GB
EGAF50000312429 fastq.gz 1.8 GB
EGAF50000312430 fastq.gz 1.9 GB
EGAF50000312431 fastq.gz 1.7 GB
EGAF50000312432 fastq.gz 1.8 GB
EGAF50000312433 fastq.gz 1.7 GB
EGAF50000312434 fastq.gz 1.7 GB
EGAF50000312435 fastq.gz 2.5 GB
EGAF50000312436 fastq.gz 2.5 GB
EGAF50000312437 fastq.gz 2.9 GB
EGAF50000312438 fastq.gz 2.8 GB
EGAF50000312439 fastq.gz 2.9 GB
EGAF50000312440 fastq.gz 3.0 GB
EGAF50000312441 fastq.gz 3.3 GB
EGAF50000312442 fastq.gz 1.7 GB
EGAF50000312443 fastq.gz 2.4 GB
EGAF50000312444 fastq.gz 2.0 GB
EGAF50000312445 fastq.gz 2.8 GB
EGAF50000312446 fastq.gz 2.9 GB
EGAF50000312447 fastq.gz 3.2 GB
EGAF50000312448 fastq.gz 4.5 GB
EGAF50000312449 fastq.gz 2.8 GB
EGAF50000312450 fastq.gz 1.8 GB
EGAF50000312451 fastq.gz 1.8 GB
EGAF50000312452 fastq.gz 1.8 GB
EGAF50000312453 fastq.gz 2.0 GB
EGAF50000312454 fastq.gz 2.1 GB
EGAF50000312455 fastq.gz 2.8 GB
EGAF50000312456 fastq.gz 3.6 GB
EGAF50000312457 fastq.gz 2.5 GB
EGAF50000312458 fastq.gz 2.4 GB
EGAF50000312459 fastq.gz 2.4 GB
EGAF50000312460 fastq.gz 3.3 GB
EGAF50000312461 fastq.gz 2.7 GB
EGAF50000312462 fastq.gz 2.8 GB
EGAF50000312463 fastq.gz 2.5 GB
EGAF50000312464 fastq.gz 3.2 GB
EGAF50000312465 fastq.gz 2.7 GB
EGAF50000312466 fastq.gz 2.8 GB
EGAF50000312467 fastq.gz 2.3 GB
EGAF50000312468 fastq.gz 1.7 GB
EGAF50000312469 fastq.gz 2.4 GB
EGAF50000313791 fastq.gz 299.8 MB
EGAF50000313792 fastq.gz 327.7 MB
EGAF50000313793 fastq.gz 341.2 MB
EGAF50000934851 fastq.gz 2.1 GB
EGAF50000934852 fastq.gz 2.6 GB
EGAF50000934853 fastq.gz 2.0 GB
EGAF50000934854 fastq.gz 2.7 GB
EGAF50000934855 fastq.gz 2.7 GB
EGAF50000934856 fastq.gz 2.5 GB
EGAF50000934857 fastq.gz 412.7 MB
EGAF50000934858 fastq.gz 441.2 MB
EGAF50000934859 fastq.gz 406.5 MB
EGAF50000934860 fastq.gz 2.2 GB
EGAF50000934861 fastq.gz 2.0 GB
EGAF50000934862 fastq.gz 2.7 GB
EGAF50000934863 fastq.gz 2.5 GB
EGAF50000934864 fastq.gz 2.7 GB
EGAF50000934865 fastq.gz 2.1 GB
EGAF50000934866 fastq.gz 2.2 GB
EGAF50000934867 fastq.gz 2.8 GB
EGAF50000934868 fastq.gz 1.9 GB
EGAF50000934869 fastq.gz 2.0 GB
EGAF50000934870 fastq.gz 429.8 MB
EGAF50000934871 fastq.gz 392.5 MB
EGAF50000934872 fastq.gz 441.2 MB
EGAF50000934873 fastq.gz 398.5 MB
EGAF50000934874 fastq.gz 304.2 MB
EGAF50000934875 tsv 14.7 MB
EGAF50000934876 tsv 252.3 kB
140 Files (249.3 GB)