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Raw Bulk QuantSeq 3′ mRNA Sequencing Data from 137 Bladder Cancer Tumor Samples

This controlled-access dataset comprises raw single-end FASTQ files generated from 137 bladder cancer tumor samples collected from 112 patients using the Lexogen QuantSeq 3′ mRNA-Seq protocol on the Illumina NovaSeq 6000 platform. Access is governed by the Bladder Cancer Genomics Data Access Committee (DAC) and the associated controlled-access policy.

Request Access

DUO:0000007
version: 2021-02-23

disease specific research

This data use permission indicates that use is allowed provided it is related to the specified disease.

ModifiersMONDO:0004992 MONDO:0001187

DUO:0000021
version: 2021-02-23

ethics approval required

This data use modifier indicates that the requestor must provide documentation of local IRB/ERB approval.

DUO:0000026
version: 2021-02-23

user specific restriction

This data use modifier indicates that use is limited to use by approved users.

DUO:0000027
version: 2021-02-23

project specific restriction

This data use modifier indicates that use is limited to use within an approved project.

DUO:0000046
version: 2021-02-23

non-commercial use only

This data use modifier indicates that use of the data is limited to not-for-profit use.

Controlled Access Policy for Bladder Cancer Genomic and Clinical Data – Erlangen–Bonn Collaboration

This policy governs access to controlled-access human genomic and associated clinical datasets generated through the collaborative bladder cancer research program between Universitätsklinikum Erlangen and Universitätsklinikum Bonn, and deposited in the European Genome-phenome Archive (EGA). Access to these datasets is strictly controlled and is not granted automatically. Data access requests are considered only from qualified researchers conducting scientifically and ethically justified research that is consistent with the informed consent provided by study participants, applicable ethical approvals, and relevant legal and regulatory requirements. Each application is reviewed individually by the Bladder Cancer Genomics Data Access Committee (DAC). Applicants must provide a detailed description of the proposed research project, the intended use of the requested data, the investigators involved, institutional affiliation, funding source where applicable, and any required ethical or regulatory approvals. The DAC may request additional information or clarification before reaching a decision. Access is granted solely to the approved investigators for the specific research project authorized by the DAC. Any new research purpose, extension of the approved project, addition of new investigators, or request for additional datasets requires submission of a new or amended application for DAC review and approval. Redistribution, transfer, sharing, or disclosure of the data to any third party is strictly prohibited without prior written authorization from the DAC. Approved users are responsible for implementing appropriate technical and organizational safeguards to protect participant confidentiality and for complying with all applicable legal, ethical, institutional, and data protection requirements. Commercial use of the data, including research and development conducted by or on behalf of commercial entities, is not permitted unless explicitly approved by the DAC and demonstrably consistent with the participants' informed consent, applicable ethical approvals, and institutional policies. The DAC reserves the right to approve, request modifications to, or decline any application that is considered incompatible with participant consent, ethical approvals, institutional policies, applicable data protection regulations, or the objectives of the proposed research.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000002032 RNASeq

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
EGAF50000940790 fq.gz 1.2 GB
EGAF50000940791 fq.gz 1.2 GB
EGAF50000940792 fq.gz 947.5 MB
EGAF50000940793 fq.gz 1.5 GB
EGAF50000940794 fq.gz 911.2 MB
EGAF50000940795 fq.gz 963.7 MB
EGAF50000940796 fq.gz 975.8 MB
EGAF50000940797 fq.gz 1.2 GB
EGAF50000940798 fq.gz 1.1 GB
EGAF50000940799 fq.gz 1.3 GB
EGAF50000940800 fq.gz 948.8 MB
EGAF50000940801 fq.gz 1.2 GB
EGAF50000940802 fq.gz 1.1 GB
EGAF50000940803 fq.gz 952.0 MB
EGAF50000940804 fq.gz 1.5 GB
EGAF50000940805 fq.gz 1.1 GB
EGAF50000940806 fq.gz 906.7 MB
EGAF50000940807 fq.gz 1.5 GB
EGAF50000940808 fq.gz 1.0 GB
EGAF50000940809 fq.gz 1.0 GB
EGAF50000940810 fq.gz 1.0 GB
EGAF50000940811 fq.gz 1.1 GB
EGAF50000940812 fq.gz 1.1 GB
EGAF50000940813 fq.gz 1.1 GB
EGAF50000940814 fq.gz 1.0 GB
EGAF50000940815 fq.gz 1.1 GB
EGAF50000940816 fq.gz 1.4 GB
EGAF50000940817 fq.gz 1.1 GB
EGAF50000940818 fq.gz 909.2 MB
EGAF50000940819 fq.gz 1.2 GB
EGAF50000940820 fq.gz 977.3 MB
EGAF50000940821 fq.gz 937.5 MB
EGAF50000940822 fq.gz 924.9 MB
EGAF50000940823 fq.gz 1.1 GB
EGAF50000940824 fq.gz 1.1 GB
EGAF50000940825 fq.gz 1.4 GB
EGAF50000940826 fq.gz 1.0 GB
EGAF50000940827 fq.gz 1.4 GB
EGAF50000940828 fq.gz 930.8 MB
EGAF50000940829 fq.gz 912.1 MB
EGAF50000940830 fq.gz 1.0 GB
EGAF50000940831 fq.gz 1.1 GB
EGAF50000940832 fq.gz 895.7 MB
EGAF50000940833 fq.gz 1.0 GB
EGAF50000940834 fq.gz 994.9 MB
EGAF50000940835 fq.gz 1.0 GB
EGAF50000940836 fq.gz 1.3 GB
EGAF50000940837 fq.gz 1.0 GB
EGAF50000940838 fq.gz 1.3 GB
EGAF50000940839 fq.gz 1.1 GB
EGAF50000940840 fq.gz 1.5 GB
EGAF50000940841 fq.gz 942.5 MB
EGAF50000940842 fq.gz 979.0 MB
EGAF50000940843 fq.gz 1.5 GB
EGAF50000940844 fq.gz 1.2 GB
EGAF50000940845 fq.gz 1.2 GB
EGAF50000940846 fq.gz 1.3 GB
EGAF50000940847 fq.gz 1.3 GB
EGAF50000940848 fq.gz 1.1 GB
EGAF50000940849 fq.gz 1.2 GB
EGAF50000940850 fq.gz 1.4 GB
EGAF50000940851 fq.gz 1.1 GB
EGAF50000940852 fq.gz 906.7 MB
EGAF50000940853 fq.gz 938.3 MB
EGAF50000940854 fq.gz 1.0 GB
EGAF50000940855 fq.gz 1.0 GB
EGAF50000940856 fq.gz 1.0 GB
EGAF50000940857 fq.gz 1.3 GB
EGAF50000940858 fq.gz 973.3 MB
EGAF50000940859 fq.gz 1.3 GB
EGAF50000940860 fq.gz 1.1 GB
EGAF50000940861 fq.gz 1.1 GB
EGAF50000940862 fq.gz 1.1 GB
EGAF50000940863 fq.gz 1.1 GB
EGAF50000940864 fq.gz 1.0 GB
EGAF50000940865 fq.gz 968.7 MB
EGAF50000940866 fq.gz 934.1 MB
EGAF50000940867 fq.gz 1.5 GB
EGAF50000940868 fq.gz 1.0 GB
EGAF50000940869 fq.gz 1.1 GB
EGAF50000940870 fq.gz 1.0 GB
EGAF50000940871 fq.gz 1.2 GB
EGAF50000940872 fq.gz 1.1 GB
EGAF50000940873 fq.gz 1.1 GB
EGAF50000940874 fq.gz 1.2 GB
EGAF50000940875 fq.gz 1.2 GB
EGAF50000940876 fq.gz 969.8 MB
EGAF50000940877 fq.gz 996.7 MB
EGAF50000940878 fq.gz 1.1 GB
EGAF50000940879 fq.gz 1.1 GB
EGAF50000940880 fq.gz 1.1 GB
EGAF50000940881 fq.gz 994.0 MB
EGAF50000940882 fq.gz 1.1 GB
EGAF50000940883 fq.gz 1.2 GB
EGAF50000940884 fq.gz 1.0 GB
EGAF50000940885 fq.gz 1.2 GB
EGAF50000940886 fq.gz 916.5 MB
EGAF50000940887 fq.gz 1.2 GB
EGAF50000940888 fq.gz 1.2 GB
EGAF50000940889 fq.gz 1.2 GB
EGAF50000940890 fq.gz 927.8 MB
EGAF50000940891 fq.gz 1.2 GB
EGAF50000940892 fq.gz 1.1 GB
EGAF50000940893 fq.gz 1.3 GB
EGAF50000940894 fq.gz 1.2 GB
EGAF50000940895 fq.gz 1.1 GB
EGAF50000940896 fq.gz 1.3 GB
EGAF50000940897 fq.gz 922.0 MB
EGAF50000940898 fq.gz 1.3 GB
EGAF50000940899 fq.gz 1.1 GB
EGAF50000940900 fq.gz 1.1 GB
EGAF50000940901 fq.gz 1.3 GB
EGAF50000940902 fq.gz 1.0 GB
EGAF50000940903 fq.gz 1.1 GB
EGAF50000940904 fq.gz 1.2 GB
EGAF50000940905 fq.gz 1.1 GB
EGAF50000940906 fq.gz 1.2 GB
EGAF50000940907 fq.gz 1.0 GB
EGAF50000940908 fq.gz 1.0 GB
EGAF50000940909 fq.gz 1.1 GB
EGAF50000940910 fq.gz 934.7 MB
EGAF50000940911 fq.gz 1.0 GB
EGAF50000940912 fq.gz 1.0 GB
EGAF50000940913 fq.gz 1.0 GB
EGAF50000940914 fq.gz 1.1 GB
EGAF50000940915 fq.gz 1.1 GB
EGAF50000940916 fq.gz 1.2 GB
EGAF50000940917 fq.gz 1.1 GB
EGAF50000940918 fq.gz 1.3 GB
EGAF50000940919 fq.gz 1.1 GB
EGAF50000940920 fq.gz 987.8 MB
EGAF50000940921 fq.gz 1.1 GB
EGAF50000940922 fq.gz 1.1 GB
EGAF50000940923 fq.gz 1.1 GB
EGAF50000940924 fq.gz 1.1 GB
EGAF50000940925 fq.gz 1.0 GB
EGAF50000940927 fq.gz 1.4 GB
137 Files (152.3 GB)