About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Single-cell ATAC-seq

Single-cell ATAC sequencing dataset (FASTQ files).

Request Access

DUO:0000018
version: 2021-02-23

not for profit, non commercial use only

This data use modifier indicates that use of the data is limited to not-for-profit organizations and not-for-profit use, non-commercial use.

DUO:0000020
version: 2021-02-23

collaboration required

This data use modifier indicates that the requestor must agree to collaboration with the primary study investigator(s).

DUO:0000029
version: 2021-02-23

return to database or resource

This data use modifier indicates that the requestor must return derived/enriched data to the database/resource.

DUO:0000042
version: 2021-02-23

general research use

This data use permission indicates that use is allowed for general research use for any research purpose.

IDIBAPS Biomedical Research Data

Data are available through controlled access for biomedical and health-related research purposes. Access requests will be reviewed by the IDIBAPS Data Access Committee (DAC). Applicants must submit a research proposal describing the intended use of the data and identify all individuals who will have access to the dataset. Data may only be used for the purposes approved by the DAC and must not be redistributed to third parties without prior written authorization. Users must not attempt to identify, contact, or otherwise infer the identity of research participants. All users must comply with applicable ethical requirements and data protection regulations, including the General Data Protection Regulation (GDPR). Publications, presentations, preprints, reports, software, or other research outputs generated using the data must acknowledge the original study, the contributing investigators, and the data source as specified by the Data Access Committee. Users must cite the study accession number and any related primary publications whenever applicable. The DAC may request notification of publications resulting from approved data access.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000002033 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000941111 fastq.gz 712.3 MB
EGAF50000941116 fastq.gz 1.9 GB
EGAF50000941117 fastq.gz 3.8 GB
EGAF50000941118 fastq.gz 3.8 GB
EGAF50000941119 fastq.gz 608.6 MB
EGAF50000941120 fastq.gz 1.8 GB
EGAF50000941121 fastq.gz 649.8 MB
EGAF50000941122 fastq.gz 1.8 GB
EGAF50000941123 fastq.gz 689.5 MB
EGAF50000941124 fastq.gz 707.3 MB
EGAF50000941125 fastq.gz 697.6 MB
EGAF50000941126 fastq.gz 4.1 GB
EGAF50000941127 fastq.gz 3.7 GB
EGAF50000941128 fastq.gz 3.7 GB
EGAF50000941129 fastq.gz 687.9 MB
EGAF50000941130 fastq.gz 283.0 MB
EGAF50000941131 fastq.gz 797.1 MB
EGAF50000941132 fastq.gz 1.4 GB
EGAF50000941133 fastq.gz 1.9 GB
EGAF50000941135 fastq.gz 1.8 GB
EGAF50000941136 fastq.gz 621.3 MB
EGAF50000941137 fastq.gz 3.8 GB
EGAF50000941138 fastq.gz 3.7 GB
EGAF50000941139 fastq.gz 3.4 GB
EGAF50000941140 fastq.gz 1.7 GB
EGAF50000941141 fastq.gz 665.5 MB
EGAF50000941142 fastq.gz 592.7 MB
EGAF50000941167 fastq.gz 3.7 GB
EGAF50000941168 fastq.gz 3.8 GB
EGAF50000941169 fastq.gz 1.8 GB
EGAF50000941170 fastq.gz 3.6 GB
EGAF50000941171 fastq.gz 607.3 MB
EGAF50000941172 fastq.gz 1.8 GB
EGAF50000941173 fastq.gz 3.5 GB
EGAF50000941174 fastq.gz 3.6 GB
EGAF50000941175 fastq.gz 1.6 GB
EGAF50000941176 fastq.gz 1.9 GB
EGAF50000941177 fastq.gz 3.6 GB
EGAF50000941178 fastq.gz 591.6 MB
EGAF50000941179 fastq.gz 1.7 GB
EGAF50000941180 fastq.gz 3.3 GB
EGAF50000941181 fastq.gz 3.3 GB
EGAF50000941182 fastq.gz 645.7 MB
EGAF50000941183 fastq.gz 1.7 GB
EGAF50000941184 fastq.gz 3.4 GB
EGAF50000941185 fastq.gz 3.4 GB
EGAF50000941190 fastq.gz 1.9 GB
EGAF50000941191 fastq.gz 3.9 GB
EGAF50000941192 fastq.gz 3.8 GB
EGAF50000941193 fastq.gz 3.3 GB
EGAF50000941197 fastq.gz 605.2 MB
EGAF50000941198 fastq.gz 1.7 GB
EGAF50000941199 fastq.gz 3.4 GB
EGAF50000941200 fastq.gz 3.5 GB
EGAF50000941384 fastq.gz 3.6 GB
EGAF50000941385 fastq.gz 3.6 GB
EGAF50000941401 fastq.gz 586.5 MB
EGAF50000941402 fastq.gz 1.7 GB
EGAF50000941403 fastq.gz 3.3 GB
EGAF50000941404 fastq.gz 3.3 GB
EGAF50000941405 fastq.gz 3.6 GB
EGAF50000941406 fastq.gz 3.5 GB
EGAF50000941407 fastq.gz 2.0 GB
EGAF50000941408 fastq.gz 4.0 GB
64 Files (148.7 GB)