About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Male blood only WGS

Data from 42 male participants that only had blood samples available for WGS analysis

Request Access

DUO:0000006
version: 2021-02-23

health or medical or biomedical research

This data use permission indicates that use is allowed for health/medical/biomedical purposes; does not include the study of population origins or ancestry.

DUO:0000019
version: 2021-02-23

publication required

This data use modifier indicates that requestor agrees to make results of studies using the data available to the larger scientific community.

DUO:0000021
version: 2021-02-23

ethics approval required

This data use modifier indicates that the requestor must provide documentation of local IRB/ERB approval.

DUO:0000025
version: 2021-02-23

time limit on use

This data use modifier indicates that use is approved for a specific number of months.

DUO:0000026
version: 2021-02-23

user specific restriction

This data use modifier indicates that use is limited to use by approved users.

DUO:0000027
version: 2021-02-23

project specific restriction

This data use modifier indicates that use is limited to use within an approved project.

DUO:0000028
version: 2021-02-23

institution specific restriction

This data use modifier indicates that use is limited to use within an approved institution.

CUP-COMP Data Access Committee Policy

At the Christie NHS Foundation Trust we are committed to making research data available to other researchers wherever possible. The CUP-COMP study was funded by Innovate UK and the sharing of data is in line with the UKRI policy. The chief investigator is substantively employed by The University of Manchester and conducts research in accordance with the institution’s Code of Good Research Conduct. This study was sponsored by The Christie NHS Foundation Trust. The sharing of research data obtained from Christie sponsored studies outside of the regulatory approved study is compliant with the Trust’s information sharing policy. In accordance with this policy, the requesting lead applicant is required to complete a data release request form. To access study data for this Christie sponsored study, we ask that the requestor contact the data access committee to obtain the current version of the study data release request form. The study team will be asked to complete the study data request form and return this to the data access committee administrator. In accordance with the best practice guidance for data access committees as published by the EGA, additional checks may be performed by the Trust to verify the institution and identity of the requestor. The request will be reviewed by a data access review panel which includes representation form the CUP COMP study team, study sponsor and information governance representation from the Trust. The requestor must also agree to the terms and conditions set out in the data access agreement and if applicable any overarching research agreement with The Christie. Following signature of the relevant agreements, the data access committee will approve the release of the requested data.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000001821 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000944510 fastq.gz 30.2 GB
EGAF50000944511 fastq.gz 36.4 GB
EGAF50000944512 fastq.gz 37.0 GB
EGAF50000944513 fastq.gz 33.8 GB
EGAF50000944514 fastq.gz 28.4 GB
EGAF50000944515 bam 54.4 GB
EGAF50000944516 bam 6.8 GB
EGAF50000944517 bam 84.4 GB
EGAF50000944518 bam 51.1 GB
EGAF50000944519 bam 65.9 GB
EGAF50000944520 bam 68.6 GB
EGAF50000944521 bam 59.3 GB
EGAF50000944522 bam 51.1 GB
EGAF50000944523 bam 51.4 GB
EGAF50000944524 bam 65.4 GB
EGAF50000944525 bam 55.8 GB
EGAF50000944526 bam 60.6 GB
EGAF50000944527 bam 38.9 GB
EGAF50000944528 bam 35.6 GB
EGAF50000944529 bam 42.3 GB
EGAF50000944530 bam 57.9 GB
EGAF50000944531 bam 57.9 GB
EGAF50000944532 bam 57.1 GB
EGAF50000944533 bam 58.4 GB
EGAF50000944534 bam 79.1 GB
EGAF50000944535 bam 60.6 GB
EGAF50000944536 bam 47.9 GB
EGAF50000944537 bam 74.9 GB
EGAF50000944538 bam 52.2 GB
EGAF50000944539 bam 84.6 GB
EGAF50000944540 bam 36.0 GB
EGAF50000944541 fastq.gz 32.2 GB
EGAF50000944542 fastq.gz 33.8 GB
EGAF50000944543 fastq.gz 3.2 GB
EGAF50000944544 fastq.gz 3.5 GB
EGAF50000944545 fastq.gz 50.9 GB
EGAF50000944546 fastq.gz 53.6 GB
EGAF50000944547 fastq.gz 30.7 GB
EGAF50000944548 fastq.gz 32.4 GB
EGAF50000944549 fastq.gz 21.4 GB
EGAF50000944550 fastq.gz 22.5 GB
EGAF50000944551 fastq.gz 39.4 GB
EGAF50000944552 fastq.gz 41.9 GB
EGAF50000944553 fastq.gz 41.3 GB
EGAF50000944554 fastq.gz 43.3 GB
EGAF50000944555 fastq.gz 36.9 GB
EGAF50000944556 fastq.gz 38.1 GB
EGAF50000944557 fastq.gz 31.2 GB
EGAF50000944558 fastq.gz 32.7 GB
EGAF50000944559 fastq.gz 30.0 GB
EGAF50000944560 fastq.gz 31.2 GB
EGAF50000944561 fastq.gz 38.4 GB
EGAF50000944562 fastq.gz 40.0 GB
EGAF50000944563 fastq.gz 33.6 GB
EGAF50000944564 fastq.gz 35.3 GB
EGAF50000944565 fastq.gz 26.1 GB
EGAF50000944566 fastq.gz 33.4 GB
EGAF50000944567 fastq.gz 22.3 GB
EGAF50000944568 fastq.gz 34.5 GB
EGAF50000944569 fastq.gz 21.6 GB
EGAF50000944570 fastq.gz 44.3 GB
EGAF50000944571 fastq.gz 33.6 GB
EGAF50000944572 fastq.gz 33.0 GB
EGAF50000944573 fastq.gz 34.5 GB
EGAF50000944574 fastq.gz 49.0 GB
EGAF50000944575 fastq.gz 33.9 GB
EGAF50000944576 fastq.gz 24.9 GB
EGAF50000944577 fastq.gz 48.4 GB
EGAF50000944578 fastq.gz 25.4 GB
EGAF50000944579 fastq.gz 50.8 GB
EGAF50000944580 fastq.gz 50.2 GB
EGAF50000944581 fastq.gz 36.0 GB
EGAF50000944582 fastq.gz 37.5 GB
EGAF50000944583 fastq.gz 37.5 GB
EGAF50000944584 fastq.gz 33.2 GB
EGAF50000944585 fastq.gz 38.8 GB
EGAF50000944586 fastq.gz 41.8 GB
EGAF50000944587 fastq.gz 27.6 GB
EGAF50000944588 fastq.gz 43.0 GB
EGAF50000944589 fastq.gz 39.7 GB
EGAF50000944590 fastq.gz 23.2 GB
EGAF50000944591 fastq.gz 28.5 GB
EGAF50000944592 fastq.gz 23.3 GB
EGAF50000944593 fastq.gz 23.8 GB
EGAF50000944594 fastq.gz 30.3 GB
EGAF50000944595 fastq.gz 23.9 GB
EGAF50000944596 fastq.gz 31.2 GB
EGAF50000944597 fastq.gz 34.2 GB
EGAF50000944598 fastq.gz 36.4 GB
EGAF50000944599 fastq.gz 37.2 GB
EGAF50000944600 fastq.gz 45.3 GB
EGAF50000944601 fastq.gz 24.6 GB
EGAF50000944602 bam 36.2 GB
EGAF50000944603 bam 61.4 GB
EGAF50000944604 bam 39.1 GB
EGAF50000944605 bam 68.0 GB
EGAF50000944606 bam 40.3 GB
EGAF50000944607 bam 74.2 GB
EGAF50000944608 bam 48.2 GB
EGAF50000944609 bam 47.8 GB
EGAF50000944610 bam 69.1 GB
EGAF50000944611 bam 56.4 GB
EGAF50000944612 bam 41.3 GB
EGAF50000944613 bam 61.6 GB
EGAF50000944614 bam 60.2 GB
EGAF50000944615 bam 46.3 GB
EGAF50000944616 bam 55.7 GB
EGAF50000944617 bam 53.5 GB
EGAF50000944618 fastq.gz 21.8 GB
EGAF50000944619 fastq.gz 28.6 GB
EGAF50000944620 fastq.gz 30.8 GB
EGAF50000944621 fastq.gz 31.9 GB
EGAF50000944622 fastq.gz 42.6 GB
EGAF50000944623 fastq.gz 34.7 GB
EGAF50000944624 fastq.gz 25.7 GB
EGAF50000944625 fastq.gz 46.7 GB
EGAF50000944626 fastq.gz 29.9 GB
EGAF50000944627 fastq.gz 26.7 GB
EGAF50000944628 fastq.gz 20.9 GB
EGAF50000944629 fastq.gz 35.7 GB
EGAF50000944630 fastq.gz 34.3 GB
EGAF50000944631 fastq.gz 33.4 GB
EGAF50000944632 fastq.gz 21.4 GB
EGAF50000944633 fastq.gz 22.1 GB
EGAF50000944634 fastq.gz 36.4 GB
EGAF50000944635 fastq.gz 32.4 GB
EGAF50000944636 vcf.gz 463.9 MB
EGAF50000944637 vcf.gz 1.8 kB
EGAF50000944638 vcf.gz 1.1 MB
EGAF50000944639 vcf.gz 47.5 kB
EGAF50000944640 vcf.gz 1.8 kB
EGAF50000944641 vcf.gz 48.2 kB
EGAF50000944642 vcf.gz 48.5 kB
EGAF50000944643 vcf.gz 467.8 MB
EGAF50000944644 vcf.gz 1.3 kB
EGAF50000944645 vcf.gz 50.4 kB
EGAF50000944646 vcf.gz 55.6 kB
EGAF50000944647 vcf.gz 1.0 MB
EGAF50000944648 vcf.gz 453.0 MB
EGAF50000944649 vcf.gz 1.8 kB
EGAF50000944650 vcf.gz 1.2 MB
EGAF50000944651 vcf.gz 4.6 MB
EGAF50000944652 vcf.gz 46.1 kB
EGAF50000944653 vcf.gz 439.1 MB
EGAF50000944654 vcf.gz 430.6 MB
EGAF50000944655 vcf.gz 1.8 kB
EGAF50000944656 vcf.gz 438.3 MB
EGAF50000944657 vcf.gz 49.3 kB
EGAF50000944658 vcf.gz 689.0 kB
EGAF50000944659 vcf.gz 52.1 kB
EGAF50000944660 vcf.gz 1.8 kB
EGAF50000944661 vcf.gz 439.1 MB
EGAF50000944662 vcf.gz 57.0 kB
EGAF50000944663 vcf.gz 1.8 kB
EGAF50000944664 vcf.gz 441.9 MB
EGAF50000944665 vcf.gz 1.0 MB
EGAF50000944666 vcf.gz 4.3 MB
EGAF50000944667 vcf.gz 1.8 kB
EGAF50000944668 vcf.gz 429.4 MB
EGAF50000944669 vcf.gz 3.8 MB
EGAF50000944670 vcf.gz 433.7 MB
EGAF50000944671 vcf.gz 869.3 kB
EGAF50000944672 vcf.gz 3.9 MB
EGAF50000944673 vcf.gz 46.1 kB
EGAF50000944674 vcf.gz 447.9 MB
EGAF50000944675 vcf.gz 1.8 kB
EGAF50000944676 vcf.gz 1.1 MB
EGAF50000944677 vcf.gz 4.3 MB
EGAF50000944678 vcf.gz 58.7 kB
EGAF50000944679 vcf.gz 1.0 MB
EGAF50000944680 vcf.gz 46.5 kB
EGAF50000944681 vcf.gz 1.8 kB
EGAF50000944682 vcf.gz 451.6 MB
EGAF50000944683 vcf.gz 1.8 kB
EGAF50000944684 vcf.gz 423.9 MB
EGAF50000944685 vcf.gz 755.8 kB
EGAF50000944686 vcf.gz 3.6 MB
EGAF50000944687 vcf.gz 442.8 MB
EGAF50000944688 vcf.gz 1.8 kB
EGAF50000944689 vcf.gz 990.2 kB
EGAF50000944690 vcf.gz 4.2 MB
EGAF50000944691 vcf.gz 52.1 kB
EGAF50000944692 vcf.gz 1.8 kB
EGAF50000944693 vcf.gz 440.7 MB
EGAF50000944694 vcf.gz 3.6 MB
EGAF50000944695 vcf.gz 49.8 kB
EGAF50000944696 vcf.gz 1.8 kB
EGAF50000944697 vcf.gz 4.0 MB
EGAF50000944698 vcf.gz 50.8 kB
EGAF50000944699 vcf.gz 1.8 kB
EGAF50000944700 vcf.gz 41.8 kB
EGAF50000944701 vcf.gz 1.8 kB
EGAF50000944702 vcf.gz 1.1 MB
EGAF50000944703 vcf.gz 4.4 MB
EGAF50000944704 vcf.gz 1.8 kB
EGAF50000944705 vcf.gz 921.1 kB
EGAF50000944706 vcf.gz 4.0 MB
EGAF50000944707 vcf.gz 45.2 kB
EGAF50000944708 vcf.gz 43.6 kB
EGAF50000944709 vcf.gz 413.4 MB
EGAF50000944710 vcf.gz 665.7 kB
EGAF50000944711 vcf.gz 1.8 kB
EGAF50000944712 vcf.gz 430.0 MB
EGAF50000944713 vcf.gz 863.7 kB
EGAF50000944714 vcf.gz 856.1 kB
EGAF50000944715 vcf.gz 3.8 MB
EGAF50000944716 vcf.gz 43.2 kB
EGAF50000944717 vcf.gz 1.8 kB
EGAF50000944718 vcf.gz 923.8 kB
EGAF50000944719 vcf.gz 728.5 kB
EGAF50000944720 vcf.gz 4.0 MB
EGAF50000944721 vcf.gz 1.8 kB
EGAF50000944722 vcf.gz 725.2 kB
EGAF50000944723 vcf.gz 424.2 MB
EGAF50000944724 vcf.gz 50.0 kB
EGAF50000944725 vcf.gz 4.3 MB
EGAF50000944726 vcf.gz 1.8 kB
EGAF50000944727 vcf.gz 49.3 kB
EGAF50000944728 vcf.gz 1.8 kB
EGAF50000944729 vcf.gz 976.7 kB
EGAF50000944730 vcf.gz 4.2 MB
EGAF50000944731 vcf.gz 178.2 MB
EGAF50000944732 vcf.gz 1.8 kB
EGAF50000944733 vcf.gz 51.9 kB
EGAF50000944734 vcf.gz 260.0 kB
EGAF50000944735 vcf.gz 420.0 MB
EGAF50000944736 vcf.gz 637.3 kB
EGAF50000944737 vcf.gz 3.3 MB
EGAF50000944738 vcf.gz 425.9 MB
EGAF50000944739 vcf.gz 3.5 MB
EGAF50000944740 vcf.gz 51.9 kB
EGAF50000944741 vcf.gz 448.7 MB
EGAF50000944742 vcf.gz 1.1 MB
EGAF50000944743 vcf.gz 4.4 MB
EGAF50000944744 vcf.gz 1.8 kB
EGAF50000944745 vcf.gz 990.0 kB
EGAF50000944746 vcf.gz 4.1 MB
EGAF50000944747 vcf.gz 46.7 kB
EGAF50000944748 vcf.gz 1.8 kB
EGAF50000944749 vcf.gz 916.4 kB
EGAF50000944750 vcf.gz 50.8 kB
EGAF50000944751 vcf.gz 974.3 kB
EGAF50000944752 vcf.gz 4.1 MB
EGAF50000944753 vcf.gz 876.4 kB
EGAF50000944754 vcf.gz 3.9 MB
EGAF50000944755 vcf.gz 4.5 MB
EGAF50000944756 vcf.gz 892.9 kB
EGAF50000944757 vcf.gz 440.4 MB
EGAF50000944758 vcf.gz 957.6 kB
EGAF50000944759 vcf.gz 3.3 MB
EGAF50000944760 vcf.gz 45.9 kB
EGAF50000944761 vcf.gz 1.8 kB
EGAF50000944762 vcf.gz 426.7 MB
EGAF50000944763 vcf.gz 440.8 MB
EGAF50000944764 vcf.gz 3.8 MB
EGAF50000944765 vcf.gz 48.4 kB
EGAF50000944766 vcf.gz 1.8 kB
EGAF50000944767 vcf.gz 442.0 MB
EGAF50000944768 vcf.gz 43.5 kB
EGAF50000944769 vcf.gz 3.5 MB
EGAF50000944770 vcf.gz 1.1 MB
EGAF50000944771 vcf.gz 1.8 kB
EGAF50000944772 vcf.gz 662.8 kB
EGAF50000944773 vcf.gz 418.7 MB
EGAF50000944774 vcf.gz 1.8 kB
EGAF50000944775 vcf.gz 4.2 MB
EGAF50000944776 vcf.gz 50.6 kB
EGAF50000944777 vcf.gz 1.8 kB
EGAF50000944778 vcf.gz 942.1 kB
EGAF50000944779 vcf.gz 4.0 MB
EGAF50000944780 vcf.gz 49.9 kB
EGAF50000944781 vcf.gz 3.9 MB
EGAF50000944782 vcf.gz 43.0 kB
EGAF50000944783 vcf.gz 1.8 kB
EGAF50000944784 vcf.gz 4.1 MB
EGAF50000944785 vcf.gz 415.5 MB
EGAF50000944786 vcf.gz 1.8 kB
EGAF50000944787 vcf.gz 3.4 MB
EGAF50000944788 vcf.gz 881.8 kB
EGAF50000944789 vcf.gz 3.9 MB
EGAF50000944790 vcf.gz 441.5 MB
EGAF50000944791 vcf.gz 1.8 kB
EGAF50000944792 vcf.gz 980.3 kB
EGAF50000944793 vcf.gz 4.1 MB
EGAF50000944794 vcf.gz 46.2 kB
EGAF50000944795 vcf.gz 438.4 MB
EGAF50000944796 vcf.gz 56.6 kB
EGAF50000944797 vcf.gz 1.8 kB
EGAF50000944798 vcf.gz 434.7 MB
EGAF50000944799 vcf.gz 814.5 kB
EGAF50000944800 vcf.gz 3.7 MB
EGAF50000944801 vcf.gz 52.8 kB
EGAF50000944802 vcf.gz 446.6 MB
EGAF50000944803 vcf.gz 1.8 kB
EGAF50000944804 vcf.gz 4.3 MB
EGAF50000944805 vcf.gz 47.4 kB
EGAF50000944806 vcf.gz 1.1 MB
EGAF50000944807 vcf.gz 4.5 MB
EGAF50000944808 vcf.gz 50.4 kB
EGAF50000944809 vcf.gz 437.5 MB
EGAF50000944810 vcf.gz 1.8 kB
EGAF50000944811 vcf.gz 4.0 MB
EGAF50000944812 vcf.gz 773.3 kB
EGAF50000944813 vcf.gz 3.6 MB
EGAF50000944814 vcf.gz 46.8 kB
EGAF50000944815 vcf.gz 44.2 kB
EGAF50000944816 vcf.gz 441.2 MB
EGAF50000944817 vcf.gz 933.0 kB
EGAF50000944818 vcf.gz 436.7 MB
EGAF50000944819 vcf.gz 755.9 kB
EGAF50000944820 vcf.gz 1.8 kB
EGAF50000944821 vcf.gz 429.9 MB
EGAF50000944822 vcf.gz 732.6 kB
EGAF50000944823 vcf.gz 3.5 MB
EGAF50000944824 vcf.gz 447.7 MB
EGAF50000944825 vcf.gz 1.8 kB
EGAF50000944826 vcf.gz 1.8 kB
EGAF50000944827 vcf.gz 3.3 MB
EGAF50000944828 vcf.gz 48.4 kB
EGAF50000944829 vcf.gz 48.8 kB
EGAF50000944830 vcf.gz 435.0 MB
EGAF50000944831 vcf.gz 1.8 kB
EGAF50000944832 vcf.gz 438.6 MB
EGAF50000944833 vcf.gz 1.8 kB
EGAF50000944834 vcf.gz 451.2 MB
EGAF50000944835 vcf.gz 1.8 kB
EGAF50000944836 vcf.gz 44.7 kB
EGAF50000944837 vcf.gz 430.9 MB
EGAF50000944838 vcf.gz 808.7 kB
EGAF50000944839 vcf.gz 3.7 MB
330 Files (5.1 TB)