About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Bulk Immunoglobulin Heavy-Chain B-Cell Receptor Repertoire Sequencing After Pediatric Allogeneic Hematopoietic Stem Cell Transplantation

This dataset contains immunoglobulin heavy-chain (IGH) B-cell receptor repertoire sequencing data generated from peripheral blood samples of 10 pediatric recipients of allogeneic hematopoietic stem cell transplantation and 10 age-matched healthy donors. Patient samples were collected longitudinally during routine post-transplant follow-up, enabling assessment of BCR repertoire reconstitution over time. PBMC-derived total RNA was reverse transcribed to full-length cDNA, followed by multiplex PCR amplification of IGH transcripts covering IGHM, IGHG and IGHA. Libraries were prepared using the KAPA HyperPrep Kit and sequenced as paired-end reads on an Illumina MiSeq using the MiSeq Reagent Kit v3.

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Policy: LUMC Department Pediatrics, Laboratory for Pediatric Immunology

Access to this dataset is controlled by LUMC Department Pediatrics, Laboratory for Pediatric Immunology. Access to data will be granted to qualified investigators for appropriate use. Please contact this DAC to request data access.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000002068 Population Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000954445 fastq.gz 3.8 MB
EGAF50000954446 fastq.gz 2.7 MB
EGAF50000954447 fastq.gz 4.3 MB
EGAF50000954448 fastq.gz 3.5 MB
EGAF50000954449 fastq.gz 3.3 MB
EGAF50000954450 fastq.gz 5.3 MB
EGAF50000954451 fastq.gz 3.7 MB
EGAF50000954452 fastq.gz 2.4 MB
EGAF50000954453 fastq.gz 3.4 MB
EGAF50000954454 fastq.gz 2.6 MB
EGAF50000954455 fastq.gz 2.3 MB
EGAF50000954456 fastq.gz 6.2 MB
EGAF50000954457 fastq.gz 4.1 MB
EGAF50000954458 fastq.gz 1.9 MB
EGAF50000954459 fastq.gz 691.4 kB
EGAF50000954460 fastq.gz 1.6 MB
EGAF50000954461 fastq.gz 767.1 kB
EGAF50000954462 fastq.gz 7.1 MB
EGAF50000954463 fastq.gz 6.6 MB
EGAF50000954464 fastq.gz 3.8 MB
EGAF50000954465 fastq.gz 4.0 MB
EGAF50000954466 fastq.gz 1.9 MB
EGAF50000954467 fastq.gz 1.1 MB
EGAF50000954468 fastq.gz 1.9 MB
EGAF50000954469 fastq.gz 1.8 MB
EGAF50000954470 fastq.gz 1.1 MB
EGAF50000954471 fastq.gz 1.7 MB
EGAF50000954472 fastq.gz 2.8 MB
EGAF50000954473 fastq.gz 1.0 MB
EGAF50000954474 fastq.gz 812.3 kB
EGAF50000954475 fastq.gz 5.5 MB
EGAF50000954476 fastq.gz 7.4 MB
EGAF50000954477 fastq.gz 7.4 MB
EGAF50000954478 fastq.gz 1.9 MB
EGAF50000954479 fastq.gz 1.0 MB
EGAF50000954480 fastq.gz 707.5 kB
EGAF50000954481 fastq.gz 2.1 MB
EGAF50000954482 fastq.gz 858.5 kB
EGAF50000954483 fastq.gz 535.3 kB
EGAF50000954484 fastq.gz 2.1 MB
EGAF50000954485 fastq.gz 1.3 MB
EGAF50000954486 fastq.gz 720.1 kB
EGAF50000954487 fastq.gz 2.1 MB
EGAF50000954488 fastq.gz 999.6 kB
EGAF50000954489 fastq.gz 335.2 kB
EGAF50000954490 fastq.gz 5.7 MB
EGAF50000954491 fastq.gz 5.8 MB
EGAF50000954492 fastq.gz 6.4 MB
EGAF50000954493 fastq.gz 2.3 MB
EGAF50000954494 fastq.gz 1.0 MB
EGAF50000954495 fastq.gz 793.1 kB
EGAF50000954496 fastq.gz 6.8 MB
EGAF50000954497 fastq.gz 13.5 MB
EGAF50000954498 fastq.gz 6.7 MB
EGAF50000954499 fastq.gz 1.0 MB
EGAF50000954500 fastq.gz 3.0 MB
EGAF50000954501 fastq.gz 691.6 kB
EGAF50000954502 fastq.gz 5.0 MB
EGAF50000954503 fastq.gz 4.2 MB
EGAF50000954504 fastq.gz 3.8 MB
EGAF50000954505 fastq.gz 2.4 MB
EGAF50000954506 fastq.gz 3.9 MB
EGAF50000954507 fastq.gz 5.8 MB
EGAF50000954508 fastq.gz 1.1 MB
EGAF50000954509 fastq.gz 2.1 MB
EGAF50000954510 fastq.gz 694.9 kB
EGAF50000954511 fastq.gz 1.9 MB
EGAF50000954512 fastq.gz 3.0 MB
EGAF50000954513 fastq.gz 634.2 kB
EGAF50000954514 fastq.gz 3.1 MB
EGAF50000954515 fastq.gz 5.1 MB
EGAF50000954516 fastq.gz 8.7 MB
EGAF50000954517 fastq.gz 3.2 MB
EGAF50000954518 fastq.gz 1.4 MB
EGAF50000954519 fastq.gz 3.7 MB
EGAF50000954520 fastq.gz 2.8 MB
EGAF50000954521 fastq.gz 1.5 MB
EGAF50000954522 fastq.gz 6.9 MB
EGAF50000954523 fastq.gz 2.6 MB
EGAF50000954524 fastq.gz 2.9 MB
EGAF50000954525 fastq.gz 5.6 MB
EGAF50000954526 fastq.gz 3.1 MB
EGAF50000954527 fastq.gz 1.3 MB
EGAF50000954528 fastq.gz 3.7 MB
EGAF50000954529 fastq.gz 2.4 MB
EGAF50000954530 fastq.gz 1.5 MB
EGAF50000954531 fastq.gz 1.8 MB
EGAF50000954532 fastq.gz 1.1 MB
EGAF50000954533 fastq.gz 2.5 MB
EGAF50000954534 fastq.gz 229.9 kB
EGAF50000954535 fastq.gz 948.2 kB
EGAF50000954536 fastq.gz 2.0 MB
EGAF50000954537 fastq.gz 723.6 kB
EGAF50000954538 fastq.gz 1.7 MB
EGAF50000954539 fastq.gz 1.9 MB
EGAF50000954540 fastq.gz 3.6 MB
EGAF50000954541 fastq.gz 1.2 MB
EGAF50000954542 fastq.gz 2.7 MB
EGAF50000954543 fastq.gz 993.9 kB
EGAF50000954544 fastq.gz 626.6 kB
EGAF50000954545 fastq.gz 3.8 MB
EGAF50000954546 fastq.gz 2.2 MB
EGAF50000954547 fastq.gz 3.0 MB
EGAF50000954548 fastq.gz 1.5 MB
EGAF50000954549 fastq.gz 5.7 MB
EGAF50000954550 fastq.gz 2.5 MB
EGAF50000954551 fastq.gz 1.3 MB
EGAF50000954552 fastq.gz 1.5 MB
EGAF50000954553 fastq.gz 4.2 MB
EGAF50000954554 fastq.gz 4.7 MB
EGAF50000954555 fastq.gz 2.5 MB
EGAF50000954556 fastq.gz 3.3 MB
EGAF50000954557 fastq.gz 6.8 MB
EGAF50000954558 fastq.gz 3.3 MB
EGAF50000954559 fastq.gz 3.5 MB
EGAF50000954560 fastq.gz 6.2 MB
EGAF50000954561 fastq.gz 2.6 MB
EGAF50000954562 fastq.gz 1.8 MB
EGAF50000954563 fastq.gz 4.4 MB
EGAF50000954564 fastq.gz 1.9 MB
EGAF50000954565 fastq.gz 2.1 MB
EGAF50000954566 fastq.gz 1.1 MB
EGAF50000954567 fastq.gz 1.5 MB
EGAF50000954568 fastq.gz 2.6 MB
EGAF50000954569 fastq.gz 1.4 MB
EGAF50000954570 fastq.gz 1.9 MB
EGAF50000954571 fastq.gz 2.0 MB
EGAF50000954572 fastq.gz 1.0 MB
EGAF50000954573 fastq.gz 421.7 kB
EGAF50000954574 fastq.gz 2.3 MB
EGAF50000954575 fastq.gz 3.8 MB
EGAF50000954576 fastq.gz 3.7 MB
EGAF50000954577 fastq.gz 3.1 MB
EGAF50000954578 fastq.gz 3.1 MB
EGAF50000954579 fastq.gz 3.5 MB
EGAF50000954580 fastq.gz 7.2 MB
EGAF50000954581 fastq.gz 5.5 MB
EGAF50000954582 fastq.gz 2.6 MB
EGAF50000954583 fastq.gz 2.6 MB
EGAF50000954584 fastq.gz 1.1 MB
EGAF50000954585 fastq.gz 1.6 MB
EGAF50000954586 fastq.gz 5.7 MB
EGAF50000954587 fastq.gz 6.7 MB
EGAF50000954588 fastq.gz 3.4 MB
EGAF50000954589 fastq.gz 5.1 MB
EGAF50000954590 fastq.gz 5.9 MB
EGAF50000954591 fastq.gz 3.7 MB
EGAF50000954592 fastq.gz 866.8 kB
EGAF50000954593 fastq.gz 2.3 MB
EGAF50000954594 fastq.gz 698.9 kB
150 Files (448.0 MB)