About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Human Endometriosis Lesion Spatial Transcriptomics

Human Endoemtriosis Lesion spatial transcriptomics for 4 superficial peritoneal lesions and 4 ovarian lesions using VisiumHD. 1 superficial peritoneal lesion, 1 ovarian lesion, and 1 eutopic endometrium using VisiumV2. 3 superficial peritoneal lesions and 1 ovarian lesion using Xenium.

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DUO:0000007
version: 2021-02-23

disease specific research

This data use permission indicates that use is allowed provided it is related to the specified disease.

ModifiersMONDO:0005133

Data Access Agreement for Endometriosis Spatial Transcriptomics Data

Access to this Endometriosis dataset deposited in the European Genome-Phenome Archive (EGA) is governed by a Data Access Agreement (DAA), which all approved users must review, sign, and comply with prior to receiving access. Access is granted solely for research that advances endometriosis research, diagnostic tool development, therapeutic development, and improved patient care. Users are prohibited from posting, sharing, or otherwise making data available through open-access public websites or databases; deposition in controlled-access databases is permitted where appropriate. In addition, users must appropriately acknowledge and reference the EndoRISE Biorepository in all publications, presentations, and other scholarly or scientific communications that include data or findings derived, in whole or in part, from materials or data obtained through the EndoRISE Biorepository.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000002140 Transcriptome Analysis

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000984484 json 317 Bytes
EGAF50000984485 h5 19.7 MB
EGAF50000984486 csv 192.7 kB
EGAF50000984487 json 448 Bytes
EGAF50000984488 parquet 11.3 MB
EGAF50000984489 h5 56.3 MB
EGAF50000984490 json 447 Bytes
EGAF50000984491 h5 93.2 MB
EGAF50000984492 parquet 11.3 MB
EGAF50000984493 json 449 Bytes
EGAF50000984494 parquet 11.3 MB
EGAF50000984495 h5 162.2 MB
EGAF50000984496 json 446 Bytes
EGAF50000984497 h5 143.8 MB
EGAF50000984498 parquet 11.3 MB
EGAF50000984499 json 356 Bytes
EGAF50000984500 csv 193.8 kB
EGAF50000984501 h5 10.6 MB
EGAF50000984502 json 450 Bytes
EGAF50000984503 parquet 11.3 MB
EGAF50000984504 h5 66.6 MB
EGAF50000984505 json 449 Bytes
EGAF50000984506 h5 65.9 MB
EGAF50000984507 parquet 11.3 MB
EGAF50000984508 json 449 Bytes
EGAF50000984509 h5 36.0 MB
EGAF50000984510 parquet 11.3 MB
EGAF50000984511 json 449 Bytes
EGAF50000984512 h5 14.2 MB
EGAF50000984513 parquet 11.2 MB
EGAF50000984514 h5 10.4 MB
EGAF50000984515 json 358 Bytes
EGAF50000984516 csv 192.1 kB
EGAF50000984517 parquet 4.0 MB
EGAF50000984518 h5ad 209.3 MB
EGAF50000984519 h5ad 151.6 MB
EGAF50000984520 parquet 6.3 MB
EGAF50000984521 parquet 800.7 MB
EGAF50000984522 h5ad 63.3 MB
EGAF50000984523 parquet 3.4 MB
EGAF50000984524 parquet 507.5 MB
EGAF50000984525 h5ad 118.9 MB
EGAF50000984526 parquet 4.6 MB
EGAF50000984527 parquet 219.0 MB
EGAF50000984528 parquet 407.8 MB
45 Files (3.3 GB)