Need Help?

transcriptomics for IMMU-CRC1 cohort

The goal of IMMUcan is to understand how the immune system interacts with tumors and how therapeutic interventions influence this interaction. This cohort includes patients with a confirmed diagnostic of metastatic colorectal adenocarcinoma This dataset contains transcriptomics data processed with the STAR pipeline. Two sequencing kits were employed: Roche KAPA for high-quality RNA samples and Takara SMART-Seq Stranded for samples with limited RNA quantities. It contains gene-level counts.

Request Access

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000002159 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
EGAF50001033947 fastq.gz 8.3 GB
EGAF50001033948 fastq.gz 14.3 GB
EGAF50001033949 fastq.gz 6.4 GB
EGAF50001033950 fastq.gz 7.2 GB
EGAF50001033951 fastq.gz 7.8 GB
EGAF50001033952 fastq.gz 6.0 GB
EGAF50001034063 fastq.gz 4.6 GB
EGAF50001034064 fastq.gz 4.7 GB
EGAF50001034065 fastq.gz 4.8 GB
EGAF50001034066 fastq.gz 5.7 GB
EGAF50001034067 fastq.gz 6.0 GB
EGAF50001034068 fastq.gz 4.3 GB
EGAF50001034069 fastq.gz 5.5 GB
EGAF50001034070 fastq.gz 2.3 GB
EGAF50001034071 fastq.gz 6.6 GB
EGAF50001034072 fastq.gz 3.9 GB
EGAF50001034073 fastq.gz 14.8 GB
EGAF50001034074 fastq.gz 6.9 GB
EGAF50001034075 fastq.gz 2.2 GB
EGAF50001034076 fastq.gz 2.6 GB
EGAF50001034077 fastq.gz 6.6 GB
EGAF50001034078 fastq.gz 10.1 GB
EGAF50001034079 fastq.gz 11.0 GB
EGAF50001034080 fastq.gz 9.8 GB
EGAF50001034081 fastq.gz 6.0 GB
EGAF50001034082 fastq.gz 18.4 GB
EGAF50001034083 fastq.gz 12.6 GB
EGAF50001034084 fastq.gz 5.2 GB
EGAF50001034085 fastq.gz 6.5 GB
EGAF50001034086 fastq.gz 3.2 GB
EGAF50001034087 fastq.gz 5.6 GB
EGAF50001034088 fastq.gz 3.8 GB
EGAF50001034089 fastq.gz 5.7 GB
EGAF50001034090 fastq.gz 6.5 GB
EGAF50001034091 fastq.gz 6.9 GB
EGAF50001034092 fastq.gz 3.4 GB
EGAF50001034093 fastq.gz 4.6 GB
EGAF50001034098 fastq.gz 10.8 GB
EGAF50001034099 fastq.gz 5.1 GB
EGAF50001034101 fastq.gz 7.7 GB
EGAF50001034102 fastq.gz 6.8 GB
EGAF50001034103 fastq.gz 4.7 GB
EGAF50001034104 fastq.gz 4.6 GB
EGAF50001034105 fastq.gz 7.1 GB
EGAF50001034106 fastq.gz 9.3 GB
EGAF50001034107 fastq.gz 6.4 GB
EGAF50001034108 fastq.gz 6.4 GB
EGAF50001034114 fastq.gz 4.9 GB
EGAF50001034117 fastq.gz 4.6 GB
EGAF50001034118 fastq.gz 8.5 GB
EGAF50001034119 fastq.gz 3.0 GB
EGAF50001034121 fastq.gz 6.4 GB
EGAF50001034122 fastq.gz 3.1 GB
EGAF50001034123 fastq.gz 5.7 GB
EGAF50001034124 fastq.gz 8.9 GB
EGAF50001034125 fastq.gz 5.3 GB
EGAF50001034126 fastq.gz 8.4 GB
EGAF50001034127 fastq.gz 4.3 GB
EGAF50001034128 fastq.gz 2.9 GB
EGAF50001034129 fastq.gz 2.4 GB
EGAF50001034130 fastq.gz 7.1 GB
EGAF50001034131 fastq.gz 4.4 GB
EGAF50001034132 fastq.gz 5.3 GB
EGAF50001034133 fastq.gz 18.0 GB
EGAF50001034134 fastq.gz 7.8 GB
EGAF50001034135 fastq.gz 10.0 GB
EGAF50001034136 fastq.gz 2.8 GB
EGAF50001034137 fastq.gz 6.4 GB
EGAF50001034139 fastq.gz 11.4 GB
EGAF50001034140 fastq.gz 6.8 GB
EGAF50001034141 fastq.gz 7.9 GB
EGAF50001034142 fastq.gz 8.1 GB
EGAF50001034143 fastq.gz 6.1 GB
EGAF50001034175 fastq.gz 4.9 GB
EGAF50001034176 fastq.gz 5.0 GB
EGAF50001034177 fastq.gz 5.1 GB
EGAF50001034302 fastq.gz 13.2 GB
EGAF50001034303 fastq.gz 9.8 GB
EGAF50001034304 fastq.gz 5.2 GB
EGAF50001034305 fastq.gz 6.7 GB
EGAF50001034306 fastq.gz 2.9 GB
EGAF50001034307 fastq.gz 4.1 GB
EGAF50001034308 fastq.gz 7.6 GB
EGAF50001034309 fastq.gz 8.5 GB
EGAF50001034310 fastq.gz 5.7 GB
EGAF50001034311 fastq.gz 10.7 GB
EGAF50001034312 fastq.gz 8.7 GB
EGAF50001034313 fastq.gz 5.0 GB
EGAF50001034319 fastq.gz 8.7 GB
EGAF50001034321 fastq.gz 6.9 GB
EGAF50001034332 fastq.gz 7.6 GB
EGAF50001034334 fastq.gz 8.1 GB
EGAF50001034335 fastq.gz 7.9 GB
EGAF50001034336 fastq.gz 3.0 GB
EGAF50001034339 fastq.gz 3.6 GB
EGAF50001034340 fastq.gz 2.5 GB
EGAF50001034342 fastq.gz 4.9 GB
EGAF50001034343 fastq.gz 4.9 GB
EGAF50001034348 fastq.gz 5.2 GB
EGAF50001034349 fastq.gz 5.5 GB
EGAF50001034352 fastq.gz 8.7 GB
EGAF50001034353 fastq.gz 8.4 GB
EGAF50001034355 fastq.gz 6.9 GB
EGAF50001034356 fastq.gz 6.8 GB
EGAF50001034357 fastq.gz 4.3 GB
EGAF50001034361 fastq.gz 4.8 GB
EGAF50001034362 fastq.gz 4.5 GB
EGAF50001034367 fastq.gz 5.8 GB
EGAF50001034374 fastq.gz 5.8 GB
EGAF50001034375 fastq.gz 5.9 GB
EGAF50001034376 fastq.gz 6.6 GB
EGAF50001034377 fastq.gz 6.9 GB
EGAF50001034378 fastq.gz 4.8 GB
EGAF50001034379 fastq.gz 5.0 GB
EGAF50001034382 fastq.gz 6.0 GB
EGAF50001034383 fastq.gz 5.9 GB
EGAF50001034384 fastq.gz 4.3 GB
EGAF50001034385 fastq.gz 5.0 GB
EGAF50001034386 fastq.gz 5.1 GB
EGAF50001034387 fastq.gz 5.1 GB
EGAF50001034388 fastq.gz 5.3 GB
EGAF50001034390 fastq.gz 5.7 GB
EGAF50001034391 fastq.gz 5.5 GB
EGAF50001034393 fastq.gz 6.2 GB
EGAF50001034394 fastq.gz 5.4 GB
EGAF50001034399 fastq.gz 3.5 GB
EGAF50001034400 fastq.gz 3.3 GB
EGAF50001034401 fastq.gz 4.9 GB
EGAF50001034408 fastq.gz 4.5 GB
EGAF50001034409 fastq.gz 4.6 GB
EGAF50001034411 fastq.gz 5.2 GB
EGAF50001034412 fastq.gz 5.1 GB
EGAF50001034416 fastq.gz 5.7 GB
EGAF50001034417 fastq.gz 5.6 GB
EGAF50001034418 fastq.gz 7.9 GB
EGAF50001034419 fastq.gz 6.7 GB
EGAF50001034420 fastq.gz 6.9 GB
EGAF50001034421 fastq.gz 6.6 GB
EGAF50001034422 fastq.gz 5.9 GB
EGAF50001034424 fastq.gz 5.7 GB
EGAF50001034425 fastq.gz 5.6 GB
EGAF50001034426 fastq.gz 6.9 GB
EGAF50001034427 fastq.gz 6.8 GB
EGAF50001034429 fastq.gz 4.5 GB
EGAF50001034438 fastq.gz 3.3 GB
EGAF50001034443 fastq.gz 4.2 GB
EGAF50001034444 fastq.gz 5.7 GB
EGAF50001034445 fastq.gz 5.8 GB
EGAF50001034453 fastq.gz 6.2 GB
EGAF50001034454 fastq.gz 6.4 GB
EGAF50001034455 fastq.gz 2.4 GB
EGAF50001034456 fastq.gz 2.3 GB
EGAF50001034457 fastq.gz 4.6 GB
EGAF50001034458 fastq.gz 6.6 GB
EGAF50001034459 fastq.gz 5.6 GB
EGAF50001034460 fastq.gz 4.7 GB
EGAF50001034461 fastq.gz 4.6 GB
EGAF50001034464 fastq.gz 5.2 GB
EGAF50001034465 fastq.gz 5.2 GB
EGAF50001034466 fastq.gz 3.9 GB
EGAF50001034467 fastq.gz 5.6 GB
EGAF50001034468 fastq.gz 5.7 GB
EGAF50001034470 fastq.gz 3.6 GB
EGAF50001034472 fastq.gz 4.8 GB
EGAF50001034473 fastq.gz 4.9 GB
EGAF50001034476 fastq.gz 2.8 GB
EGAF50001034477 fastq.gz 2.8 GB
EGAF50001034479 fastq.gz 6.9 GB
EGAF50001034480 fastq.gz 7.1 GB
EGAF50001034482 fastq.gz 5.6 GB
EGAF50001034486 fastq.gz 2.7 GB
EGAF50001034487 fastq.gz 2.7 GB
EGAF50001034489 fastq.gz 7.0 GB
EGAF50001034490 fastq.gz 6.9 GB
EGAF50001034493 fastq.gz 3.0 GB
EGAF50001034494 fastq.gz 10.0 GB
EGAF50001034495 fastq.gz 9.7 GB
EGAF50001034501 fastq.gz 2.4 GB
EGAF50001034502 fastq.gz 2.4 GB
EGAF50001034504 fastq.gz 5.2 GB
EGAF50001034505 fastq.gz 5.4 GB
EGAF50001034506 fastq.gz 6.7 GB
EGAF50001034507 fastq.gz 5.7 GB
EGAF50001034508 fastq.gz 5.8 GB
EGAF50001034516 fastq.gz 5.4 GB
EGAF50001034517 fastq.gz 5.3 GB
EGAF50001034520 fastq.gz 4.9 GB
EGAF50001034521 fastq.gz 5.0 GB
EGAF50001034529 fastq.gz 7.0 GB
EGAF50001034530 fastq.gz 7.0 GB
EGAF50001034531 fastq.gz 5.5 GB
EGAF50001034532 fastq.gz 5.5 GB
EGAF50001034535 fastq.gz 5.4 GB
EGAF50001034536 fastq.gz 5.4 GB
EGAF50001034539 fastq.gz 8.4 GB
EGAF50001034540 fastq.gz 2.7 GB
EGAF50001034541 fastq.gz 2.8 GB
EGAF50001034542 fastq.gz 6.8 GB
EGAF50001034547 fastq.gz 5.0 GB
EGAF50001034548 fastq.gz 6.1 GB
EGAF50001034549 fastq.gz 5.9 GB
EGAF50001034550 fastq.gz 2.9 GB
EGAF50001034553 fastq.gz 4.5 GB
EGAF50001034554 fastq.gz 5.2 GB
EGAF50001034555 fastq.gz 5.0 GB
EGAF50001034556 fastq.gz 7.0 GB
EGAF50001034557 fastq.gz 7.3 GB
EGAF50001034560 fastq.gz 2.4 GB
EGAF50001034562 fastq.gz 3.3 GB
EGAF50001034563 fastq.gz 3.4 GB
EGAF50001034564 fastq.gz 4.3 GB
EGAF50001034565 fastq.gz 4.1 GB
EGAF50001034566 fastq.gz 2.8 GB
EGAF50001034567 fastq.gz 2.9 GB
EGAF50001034569 fastq.gz 5.6 GB
EGAF50001034570 fastq.gz 5.6 GB
EGAF50001034571 fastq.gz 7.9 GB
EGAF50001034572 fastq.gz 7.8 GB
EGAF50001034573 fastq.gz 4.4 GB
EGAF50001034574 fastq.gz 4.4 GB
EGAF50001034577 fastq.gz 3.1 GB
EGAF50001034581 fastq.gz 6.3 GB
EGAF50001034582 fastq.gz 6.7 GB
EGAF50001034583 fastq.gz 6.9 GB
EGAF50001034590 fastq.gz 3.1 GB
EGAF50001034591 fastq.gz 3.3 GB
EGAF50001034592 fastq.gz 3.3 GB
EGAF50001034593 fastq.gz 5.6 GB
EGAF50001034594 fastq.gz 7.3 GB
EGAF50001034595 fastq.gz 7.3 GB
EGAF50001034606 fastq.gz 6.6 GB
EGAF50001034608 fastq.gz 7.2 GB
EGAF50001034609 fastq.gz 6.9 GB
EGAF50001034610 fastq.gz 8.9 GB
EGAF50001034613 fastq.gz 6.3 GB
EGAF50001034614 fastq.gz 5.7 GB
EGAF50001034616 fastq.gz 6.3 GB
EGAF50001034617 fastq.gz 6.2 GB
EGAF50001034638 fastq.gz 5.3 GB
EGAF50001034640 fastq.gz 8.6 GB
EGAF50001034641 fastq.gz 8.9 GB
EGAF50001034655 fastq.gz 7.9 GB
EGAF50001034661 fastq.gz 5.0 GB
EGAF50001034664 fastq.gz 4.7 GB
EGAF50001034685 txt 1.2 MB
EGAF50001034687 txt 1.2 MB
EGAF50001034693 txt 1.2 MB
EGAF50001034694 txt 1.2 MB
EGAF50001034698 txt 1.2 MB
EGAF50001034700 txt 1.2 MB
EGAF50001034703 txt 1.2 MB
EGAF50001034708 txt 1.2 MB
EGAF50001034714 txt 1.2 MB
EGAF50001034716 txt 1.2 MB
EGAF50001034719 txt 1.2 MB
EGAF50001034721 txt 1.2 MB
EGAF50001034724 txt 1.2 MB
EGAF50001034725 txt 1.2 MB
EGAF50001034732 txt 1.2 MB
EGAF50001034734 txt 1.2 MB
EGAF50001034735 txt 1.2 MB
EGAF50001034737 txt 1.2 MB
EGAF50001034744 txt 1.2 MB
EGAF50001034745 txt 1.2 MB
EGAF50001034747 txt 1.2 MB
EGAF50001034749 txt 1.2 MB
EGAF50001034751 txt 1.2 MB
EGAF50001034754 txt 1.2 MB
EGAF50001034758 txt 1.2 MB
EGAF50001034764 txt 1.2 MB
EGAF50001034765 txt 1.2 MB
EGAF50001034772 txt 1.2 MB
EGAF50001034774 txt 1.2 MB
EGAF50001034775 txt 1.2 MB
EGAF50001034778 txt 1.2 MB
EGAF50001034781 txt 1.2 MB
EGAF50001034782 txt 1.2 MB
EGAF50001034784 txt 1.2 MB
EGAF50001034789 txt 1.2 MB
EGAF50001034790 txt 1.2 MB
EGAF50001034799 txt 1.2 MB
EGAF50001034803 txt 1.2 MB
EGAF50001034806 txt 1.2 MB
EGAF50001034807 txt 1.2 MB
EGAF50001034811 txt 1.2 MB
EGAF50001034812 txt 1.2 MB
EGAF50001034815 txt 1.2 MB
EGAF50001034819 txt 1.2 MB
EGAF50001034823 txt 1.2 MB
EGAF50001034824 txt 1.2 MB
EGAF50001034829 txt 1.2 MB
EGAF50001034836 txt 1.2 MB
EGAF50001034837 txt 1.2 MB
EGAF50001034838 txt 1.2 MB
EGAF50001034841 txt 1.2 MB
EGAF50001034842 txt 1.2 MB
EGAF50001034843 txt 1.2 MB
EGAF50001034850 txt 1.2 MB
EGAF50001034853 txt 1.2 MB
EGAF50001034854 txt 1.2 MB
EGAF50001034856 txt 1.2 MB
EGAF50001034857 txt 1.2 MB
EGAF50001034860 txt 1.2 MB
EGAF50001034862 txt 1.2 MB
EGAF50001034863 txt 1.2 MB
EGAF50001034870 txt 1.2 MB
EGAF50001034871 txt 1.2 MB
EGAF50001034875 txt 1.2 MB
EGAF50001034876 txt 1.2 MB
EGAF50001034877 txt 1.2 MB
EGAF50001034884 txt 1.2 MB
EGAF50001034885 txt 1.2 MB
EGAF50001034890 txt 1.2 MB
EGAF50001034893 txt 1.2 MB
EGAF50001034905 txt 1.2 MB
EGAF50001034906 txt 1.2 MB
EGAF50001034910 txt 1.2 MB
EGAF50001034920 txt 1.2 MB
EGAF50001034923 txt 1.2 MB
EGAF50001034952 txt 1.2 MB
EGAF50001034953 txt 1.2 MB
EGAF50001034956 txt 1.2 MB
EGAF50001034958 txt 1.2 MB
EGAF50001034959 txt 1.2 MB
EGAF50001034960 txt 1.2 MB
EGAF50001034961 txt 1.2 MB
EGAF50001034962 txt 1.2 MB
EGAF50001034974 txt 1.2 MB
EGAF50001034975 txt 1.2 MB
EGAF50001034976 txt 1.2 MB
EGAF50001034992 txt 1.2 MB
EGAF50001034993 txt 1.2 MB
EGAF50001034997 txt 1.2 MB
EGAF50001035012 txt 1.2 MB
EGAF50001035017 txt 1.2 MB
EGAF50001035024 txt 1.2 MB
EGAF50001035025 txt 1.2 MB
EGAF50001035036 txt 1.2 MB
EGAF50001035037 txt 1.2 MB
EGAF50001035039 txt 1.2 MB
EGAF50001035046 txt 1.2 MB
EGAF50001035048 txt 1.2 MB
EGAF50001035049 txt 1.2 MB
EGAF50001035051 txt 1.2 MB
EGAF50001035055 txt 1.2 MB
EGAF50001035056 txt 1.2 MB
EGAF50001035061 txt 1.2 MB
EGAF50001035065 txt 1.2 MB
EGAF50001035071 txt 1.2 MB
EGAF50001035072 txt 1.2 MB
EGAF50001035078 txt 1.2 MB
EGAF50001035079 txt 1.2 MB
EGAF50001035082 txt 1.2 MB
EGAF50001035083 txt 1.2 MB
EGAF50001035084 txt 1.2 MB
EGAF50001035089 txt 1.2 MB
EGAF50001035099 txt 1.2 MB
EGAF50001035100 txt 1.2 MB
EGAF50001035104 txt 1.2 MB
EGAF50001035110 txt 1.2 MB
EGAF50001035113 txt 1.2 MB
EGAF50001035116 txt 1.2 MB
EGAF50001035117 txt 1.2 MB
EGAF50001035118 txt 1.2 MB
EGAF50001035129 txt 1.2 MB
EGAF50001035130 txt 1.2 MB
366 Files (1.4 TB)