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13415 results for ""pdc"+"heritage+language"+census+study"

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Study type

affected sib pairs aggregate genomic data amplicon sequencing atac sequencing cancer genomics case set case-cohort case-control clinical cohort clinical diagnostic testing clinical genetic testing clinical trial cohort collection community control set controlled trial copy number variation (cnv) cross-sectional double-blind electronic medical records epigenetics eqtl exome sequencing extended pedigrees family family linkage forensic or paleo-genomics full transcriptome sequencing gene regulation study genotype genotype/expression genotype/expression array gwas individual-level genomic data interventional longitudinal longitudinal cohort marker discovery mendelian meta-analysis metagenomics metastasis methods development mixed multicenter multiplex families nested case-control nuclear families observational other parent-offspring parent-offspring trios partial factorial randomized phase iii placebo-controlled pooled clone sequencing population population genomics population-based control set probands prospective quantitative cross-sectional randomized randomized controlled clinical trial reference set resequencing rna sequencing rnaseq sequencing sibling cohort single cell analysis single cell rna sequence single cell rna sequencing single patient snp array analysis stem cell lines synthetic genomics targeted capture sequence transcriptome analysis transcriptome sequencing transcriptome sequencing (tumor only) tumor tumor vs. matched-normal twin virus capture sequencing whole genome sequencing whole-genome bisulfite sequencing xenograft

Dataset types

amplicon sequencing chip-seq chromatin accessibility profiling by high-throughput sequencing exome sequencing genomic variant calling genotyping by array histone modification profiling by high-throughput sequencing methylation binding domain sequencing methylation profiling by high-throughput sequencing phenotype information study summary information transcriptome profiling by array transcriptome profiling by high-throughput sequencing whole genome sequencing

Dataset technologies

ab 3730xl genetic analyzer ab 5500xl genetic analyzer ab solid 4 system affy mirna 3.0 array affymetrics axiom snp array 2.0 affymetrix affymetrix 6.0 array affymetrix 6.0; cytoscan affymetrix axiom 850k pmda array affymetrix axiom genome-wide asi 1 array affymetrix axiom genome-wide human origins array affymetrix biobank array affymetrix oncoscan ffpe express affymetrix, thermo fisher scientific agilent human mirna microarray axiom uk biobank array bgiseq-500 clariomâ„¢ d human assay complete genomics coreexome illumina snp chip array dnbseq-g400 dnbseq-t7 epic beadchip hiseq x five hiseq x ten human cardio metabochip human clariom d arrays human genome u219 array plate humanht-12 illumina (epic array) illumina 450k illumina cardio-metabochip illumina genome analyzer illumina genome analyzer ii illumina genome analyzer iix illumina global screening array illumina gsa v1.0 illumina hiseq 1000 illumina hiseq 1500 illumina hiseq 2000 illumina hiseq 2500 illumina hiseq 3000 illumina hiseq 4000 illumina hiseq x illumina human methylation epic beadchip illumina human omni1-quad beadchip. illumina humancoreexome beadchip array illumina humancoreexome-12v1-1_a illumina humancoreexome-24v1-0 illumina humancoreexome-24v1-1 illumina humanmethylation450 illumina humanomni1-quad_v1-0 illumina humanomni1-quad_v1-0, humanomniexpress-12-v1-0, humanomniexpress-24-v1-1, humanomni25-8v1-2_a1 illumina humanomni2.5 illumina humanomni2.5-8 illumina humanomni5-quad and exome sequencing illumina humanomniexpress-12 illumina humanomniexpress-12-v1-0 illumina humanomniexpress-24-v1-1 illumina humanwg-6 illumina humanwg-6 version 3 or illumina humanht-12 expression bead chip, combined on identical nucleotide universal identifiers. illumina infinium epic illumina infinium h3africa (v2) with custom add-ons illumina infinium immunochip illumina infiniumomniexpressexome-8 illumina mega array illumina methylationepic v2.0 illumina miniseq illumina miseq illumina novaseq 6000 illumina novaseq x illumina novaseq x plus illumina omni 2.5 illumina omni 2.5m illumina oncoarray illumina sangerddd_omniexplusv1_15019773 infinium gsa infinium methylationepic array ion genestudio s5 ion torrent pgm ion torrent proton ion torrent s5 xl llumina 2.5-8 minion nextseq 2000 nextseq 500 nextseq 550 nimblegen hg18 cgh 385k omniexpress omniexpress-24 v1.1 pacbio rs ii promethion qexactive plus revio sanger sequencing sequel sequel ii sequel iie sequenom massarray (agena bioscience) somascan 1.3k proteomic assay uk biobank axiomâ„¢ array unspecified

Phenotypes

CHEBI:33699 CL:0000037 CL:0000084 CL:0000094 CL:0000235 CL:0000576 CL:0000837 CL:0000863 CL:0000890 CL:0002057 EFO:0000094 EFO:0000209 EFO:0000211 EFO:0000220 EFO:0000222 EFO:0000272 EFO:0000275 EFO:0000280 EFO:0000285 EFO:0000309 EFO:0000322 EFO:0000330 EFO:0000339 EFO:0000349 EFO:0000403 EFO:0000478 EFO:0000519 EFO:0000565 EFO:0000574 EFO:0000586 EFO:0000609 EFO:0000632 EFO:0000637 EFO:0000693 EFO:0000980 EFO:0001461 EFO:0001663 EFO:0001905 EFO:0002001 EFO:0002002 EFO:0002422 EFO:0002499 EFO:0002508 EFO:0002539 EFO:0002759 EFO:0002939 EFO:0002966 EFO:0003025 EFO:0003094 EFO:0003885 EFO:0003897 EFO:0003940 EFO:0004281 EFO:0005023 EFO:0005543 EFO:0005699 EFO:0005704 EFO:0005705 EFO:0005706 EFO:0005707 EFO:0005708 EFO:0005709 EFO:0005710 EFO:0005711 EFO:0005712 EFO:0005740 EFO:0005922 EFO:0006545 EFO:0009119 EFO:0009121 EFO:0009443 EFO:0010064 EFO:1000028 EFO:1000042 EFO:1000068 EFO:1000069 EFO:1000177 EFO:1000180 EFO:1000231 EFO:1000238 EFO:1000327 EFO:1000490 EFO:1001480 EFO:1001514 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Duo

0000001 0000004 0000005 0000006 0000007 0000011 0000012 0000014 0000015 0000016 0000017 0000018 0000019 0000020 0000021 0000022 0000024 0000025 0000026 0000027 0000028 0000029 0000042 0000043 0000044 0000045 0000046

Clear

Colorectal cancer GWAS on the Spanish population

Data on Affymetrix 6.0 arrays for Genome-Wide Association Study of colorectal cancer in the Spanish population. Additionally, geographical origin for each sample is provided, which constitutes the largest to-date Spanish genomic sample population
Dataset EGAD00010001715
Brazilian GWAS Axiom850K Cancer Study

Genome-wide genotyping data generated using the Affymetrix Axiom 850K PMDA Array from 2,844 Brazilian individuals enrolled in a cancer-focused biorepository. The dataset includes colorectal, breast, and cervical cancer cases as well as cancer-free controls. The data support genome-wide association studies (GWAS), replication analyses, and polygenic risk score evaluation in an admixed Brazilian population.
Dataset EGAD00010002841
Presence of bacterial infection in brains of patients with Huntington's disease (HD)

Bacterial isolation in infected brains in patients with Huntington's disease. Here we used next generation sequencing of 16S ribosomal RNA gene PCR amplicons (NGS 16S amplicon analysis)
Study EGAS00001003678
OCCAMS_Oesophageal_Cancer_Organoids_1

***THIS DATA CAN ONLY BE USED FOR NON-COMMERCIAL CANCER RESEARCH*** Sequencing of organoid cell lines derived from oesophageal tumour sections taken from patients diagnosed with primary oesophageal cancer who underwent tumour resection surgery.
Study EGAS00001001382
Targeted_NanoSeq_Buccal

Targeted NanoSeq in buccal epithelium obtained longitudinally from a number of donors. A custom-designed panel of ~200 genes will be used to achieve high depth coverage (aiming for ~1000X at panel sites).
Study EGAS00001005925
Papua New Guinean Genome Diversity Project

Papua New Guinean populations have one of the highest genetic diversity of the world. Our dataset provides genomic data covering most of the Papua New Guinean territory (n=58).
Study EGAS00001005393
Clonal_human_oesophagus_punches

We wish we perform whole genome sequencing on known clonal libraries of human oesophagus to provide a detailed investigation into differences in mutational burden, copy number and mutational signatures both within and between individuals.
Study EGAS00001007696
GENOMIC INSTABILITY IN MISMATCH REPAIR DEFICIENT COLORECTAL CANCER

Here we performed whole exome sequencing on a series of 47 mismatch repair (MMR) deficient colorectal cancers (CRC) in order to identified key events in tumoral initiation and progression
Study EGAS00001002477
Whole_Genome_Sequencing_OMELib__Cord_blood_

The mutational landscape of haematopoietic cells will be characterized by WGS following amplification of DNA and preparation of libraries by PTA(primary template-directed amplification). Samples have been sourced from the Cambridge Biobank.
Study EGAS00001007453
Human T-bet governs innate and innate-like adaptive IFN-g immunity against mycobacteria.

We report a patient with mycobacterial disease due to inherited deficiency of the transcription factor T-bet. PBMCs from the patient was analyzed with scRNA-seq.
Study EGAS00001004504

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