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blog dac dataset documentation study

Repository

dbgap ega jga

Federated ega

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Study type

affected sib pairs aggregate genomic data amplicon sequencing cancer genomics case set case-cohort case-control clinical cohort clinical diagnostic testing clinical genetic testing clinical trial cohort collection community control set controlled trial copy number variation (cnv) cross-sectional double-blind electronic medical records epigenetics eqtl exome sequencing extended pedigrees family family linkage full transcriptome sequencing gene regulation study genotype genotype/expression genotype/expression array gwas individual-level genomic data interventional longitudinal longitudinal cohort marker discovery meta-analysis metagenomics metastasis methods development mixed multicenter multiplex families nested case-control nuclear families observational other parent-offspring parent-offspring trios partial factorial randomized phase iii placebo-controlled pooled clone sequencing population population genomics population-based control set probands prospective quantitative cross-sectional randomized randomized controlled clinical trial reference set resequencing rna sequencing rnaseq sequencing sibling cohort single cell analysis single cell rna sequencing single patient stem cell lines synthetic genomics targeted capture sequence transcriptome analysis transcriptome sequencing transcriptome sequencing (tumor only) tumor tumor vs. matched-normal twin whole genome sequencing whole-genome bisulfite sequencing

Dataset types

amplicon sequencing chip-seq chromatin accessibility profiling by high-throughput sequencing exome sequencing genomic variant calling genotyping by array histone modification profiling by high-throughput sequencing methylation binding domain sequencing methylation profiling by high-throughput sequencing phenotype information study summary information transcriptome profiling by array transcriptome profiling by high-throughput sequencing whole genome sequencing

Dataset technologies

454 gs junior 7900ht fast real-time pcr system ab 3730xl genetic analyzer ab 5500xl genetic analyzer ab solid 4 system ab solid system 3.0 affmetrix 6.0 affy mirna 3.0 array affymetrics axiom snp array 2.0 affymetrix affymetrix 6.0 array affymetrix 6.0; cytoscan affymetrix axiom genome-wide human origins 1 array affymetrix axiom genome-wide human origins array affymetrix axiom lat affymetrix axiom lat1 affymetrix axiom uk biobank + imputation to 1000gp3 and uk10k affymetrix cytoscan hd affymetrix human gene 2.0 st array affymetrix oncoscan ffpe express affymetrix pmra axiom array plates affymetrix snp6.0 affymetrix ukbiobank array affymetrix, thermo fisher scientific affymetrix_snp6- agilent agilent human mirna microarray applied biosystems 3100 automated sequencer-genemarker v.1.6 (softgenetics) applied biosystems axiom v2.0 uk biobank array axiom 815k spanish biobank array beadarray bgiseq-500 complete genomics completegenomics build 1.4.2.8 - cg build 1.4.2.8 coreexome illumina snp chip array cytoscan dnbseq-g400 dnbseq-t7 epic array (illumina) epic beadchip epic illumina arrays gencove genotyped using uk biobank axiom array (applied biosystems/thermofisher), read on genetitan multi channel system (affymetrix/thermofisher) and analysed with the axiom analysis suite (applied biosystems/thermofisher) gridion hiseq x five hiseq x ten human cardio metabochip human genome u219 array plate humanht-12 humanmethylation450k humanomni1 quad beadchip humanomniexpress-24-v1-1-a illumina illumina (epic array) illumina 2.5m illumina 2.5m human omni array illumina 450k illumina 850k. illumina arrays illumina beadchip ht12v4 illumina cardio-metabochip illumina dasl assay illumina epic microarray illumina epic v2.0 illumina fasttrack illumina genome analyzer illumina genome analyzer ii illumina genome analyzer iix illumina global screening array illumina global screening array v2.0 illumina global screening array v3 illumina global screening array-24 v1 hts gsa+multi-disease illumina h3africa array version 1 illumina hiscan illumina hiscansq illumina hiseq 1000 illumina hiseq 1500 illumina hiseq 2000 illumina hiseq 2000; illumina hiseq 2000;illumina illumina hiseq 2500 illumina hiseq 3000 illumina hiseq 4000 illumina hiseq x illumina hiseq4000 illumina human omni1-quad beadchip. illumina human omni5 bead chip (4,284,426 snps) illumina human-wg6v2 expression beadchip illumina humancoreexome-12v1-0 illumina humancoreexome-12v1-1 illumina humancoreexome-12v1-1_a illumina humancoreexome-24v1 illumina humancoreexome-24v1-0 illumina humancoreexome-24v1-1 illumina humancytosnp-12 v2.1 illumina humanexome array illumina humanomni2.5-8 illumina humanomni25-8v1-1 illumina humanomni25m-8v1-1 illumina humanomni5-quad and exome sequencing illumina humanomniexpress-12 illumina immunochip illumina infinium coreexome-24 illumina infinium coreexome-24 beadchip v1.1 illumina infinium epic illumina infinium h3africa_2017_20021485_a2 illumina infinium human global screening array gsamd-24v2-0_20024620_a1 beadchip illumina infinium immunochip illumina infinium methylationepic illumina infinium methylationepic beadchip (850 k) illumina infinium methylationepic beadchip assay illumina infinium multi-ethnic global-8 v1 kit illumina infinium oncoarray-500k illumina infiniumomniexpressexome-8 illumina iscan illumina iseq 100 illumina mega array illumina methylationepic beadchip array illumina miniseq illumina miseq illumina novaseq 6000 illumina novaseq x illumina novaseq x plus illumina omni 2.5m illumina omni 2.5m, illumina omni 5m illumina omni1 and illumina omni2.5 illumina oncoscan array illumina sangerddd_omniexplusv1_15019773 illumina-genotyping array illuminia global array v2.0 ilumina humanhap550-2v3_b-beadstudio ilumina infinium humanmethylationepic beadchip array infinium asian screening array infinium cytosnp-850k v1.4 bead chips array, illumina infinium gsa infinium methylationepic kit (illumina) infinium methylationepic v2.0 infinium methylationepic v2.0 kit infinium omniexpressexome-8 v.1.3 beadchip ion genestudio s5 ion genestudio s5 prime ion torrent pgm ion torrent proton ion torrent s5 ion torrent s5 xl llumina 2.5-8 low pass whole genome sequencing (lp-wgs) medip-seq mgiseq-2000rs minion miseq nanostring nanostring expression immunology panel nanostring ncounter max/flex nanostring ncounter pancancer io 360 panel nextseq 1000 nextseq 2000 nextseq 500 nextseq 550 nimblegen hg18 cgh 385k omniexpress omniexpress-24 v1.1 oncoscan oncoscan array orbitrap eclipse pacbio pacbio rs pacbio rs ii promethion qexactive plus revio rnaseq sequel sequel ii sequenom smartseq2_adapted snp array tapestri thermo orbitrap tribrid mass spectrometer thermofisher scientific clariomtm d pico assay unknown humanomni2-5-8-v1-1-c unknown humanomni25-8v1-1 unknown humanomni25m-8v1-1 unspecified

Phenotypes

[CHEBI:33699] [CHEBI:75909] [CL:0000037] [CL:0000038] [CL:0000041] [CL:0000049] [CL:0000050] [CL:0000051] [CL:0000092] [CL:0000096] [CL:0000235] [CL:0000236] [CL:0000499] [CL:0000523] [CL:0000557] [CL:0000560] [CL:0000576] [CL:0000580] [CL:0000582] [CL:0000624] [CL:0000625] [CL:0000765] [CL:0000786] [CL:0000787] [CL:0000788] [CL:0000809] [CL:0000810] [CL:0000811] [CL:0000815] [CL:0000817] [CL:0000837] [CL:0000840] [CL:0000841] [CL:0000844] [CL:0000863] [CL:0000890] [CL:0000893] [CL:0000904] [CL:0000905] [CL:0000907] [CL:0000913] [CL:0000939] [CL:0000945] [CL:0000970] [CL:0000972] [CL:0000990] [CL:0001024] [CL:0001059] [CL:0001062] [CL:0001066] [CL:0002015] [CL:0002026] [CL:0002057] [CL:0002092] [CL:0002102] [CL:0002324] [CL:0002326] [CL:0002420] [CL:0002489] [CL:0002540] [CL:0002555] [CL:0002618] [CL:0002619] [CL:0010004] [CL:0011114] [CL:2000006] [DOID:0081004] [EFO:0000001] [EFO:0000094] [EFO:0000095] [EFO:0000174] [EFO:0000182] [EFO:0000183] [EFO:0000196] [EFO:0000198] [EFO:0000203] [EFO:0000209] [EFO:0000211] [EFO:0000220] [EFO:0000222] [EFO:0000228] [EFO:0000239] [EFO:0000248] [EFO:0000280] [EFO:0000285] [EFO:0000289] [EFO:0000296] [EFO:0000305] [EFO:0000308] [EFO:0000309] [EFO:0000310] [EFO:0000311] [EFO:0000312] [EFO:0000313] [EFO:0000314] [EFO:0000315] [EFO:0000316] [EFO:0000317] [EFO:0000318] [EFO:0000319] [EFO:0000320] [EFO:0000321] [EFO:0000322] [EFO:0000323] [EFO:0000324] [EFO:0000325] [EFO:0000326] [EFO:0000327] [EFO:0000328] [EFO:0000329] [EFO:0000330] [EFO:0000331] [EFO:0000332] [EFO:0000333] [EFO:0000334] [EFO:0000335] [EFO:0000336] [EFO:0000337] [EFO:0000338] [EFO:0000339] [EFO:0000340] [EFO:0000341] [EFO:0000342] [EFO:0000343] [EFO:0000344] [EFO:0000345] [EFO:0000346] [EFO:0000347] [EFO:0000348] [EFO:0000349] [EFO:0000350] [EFO:0000351] [EFO:0000352] [EFO:0000353] [EFO:0000354] [EFO:0000355] [EFO:0000356] [EFO:0000357] [EFO:0000358] [EFO:0000359] [EFO:0000360] [EFO:0000361] [EFO:0000362] [EFO:0000363] [EFO:0000364] [EFO:0000365] [EFO:0000366] [EFO:0000367] [EFO:0000368] [EFO:0000369] [EFO:0000370] [EFO:0000371] [EFO:0000372] [EFO:0000373] [EFO:0000374] [EFO:0000402] [EFO:0000403] [EFO:0000437] [EFO:0000478] [EFO:0000502] [EFO:0000503] [EFO:0000519] [EFO:0000538] [EFO:0000542] [EFO:0000574] [EFO:0000609] [EFO:0000616] [EFO:0000621] [EFO:0000622] [EFO:0000623] [EFO:0000624] [EFO:0000625] [EFO:0000637] [EFO:0000691] [EFO:0000730] [EFO:0000756] [EFO:0000760] [EFO:0000761] [EFO:0000762] [EFO:0000980] [EFO:0001065] [EFO:0001376] [EFO:0001378] [EFO:0001416] [EFO:0001461] [EFO:0001639] [EFO:0001640] [EFO:0001641] [EFO:0001905] [EFO:0002001] [EFO:0002002] [EFO:0002324] [EFO:0002394] [EFO:0002422] [EFO:0002429] [EFO:0002499] [EFO:0002508] [EFO:0002539] [EFO:0002618] [EFO:0002759] [EFO:0002787] [EFO:0002793] [EFO:0002824] [EFO:0002884] [EFO:0002885] [EFO:0002886] [EFO:0002887] [EFO:0002888] [EFO:0002889] [EFO:0002890] [EFO:0002891] [EFO:0002892] [EFO:0002913] [EFO:0002916] [EFO:0002917] [EFO:0002918] [EFO:0002933] [EFO:0002937] [EFO:0002939] [EFO:0002966] [EFO:0003032] [EFO:0003060] [EFO:0003073] [EFO:0003094] [EFO:0003137] [EFO:0003761] [EFO:0003897] [EFO:0003942] [EFO:0004208] [EFO:0004708] [EFO:0004890] [EFO:0004905] [EFO:0005023] [EFO:0005168] [EFO:0005235] [EFO:0005292] [EFO:0005406] [EFO:0005537] [EFO:0005543] [EFO:0005699] [EFO:0005701] [EFO:0005704] [EFO:0005705] [EFO:0005706] [EFO:0005707] [EFO:0005708] [EFO:0005709] [EFO:0005710] [EFO:0005711] [EFO:0005712] [EFO:0005740] [EFO:0005842] [EFO:0005922] [EFO:0006461] [EFO:0006492] [EFO:0006545] [EFO:0007143] [EFO:0007336] [EFO:0007365] [EFO:0007483] [EFO:0008498] [EFO:0008524] [EFO:0008913] [EFO:0008985] [EFO:0008986] [EFO:0008987] [EFO:0008988] [EFO:0008989] [EFO:0008990] [EFO:0008991] [EFO:0008992] [EFO:0008993] [EFO:0009052] [EFO:0009119] [EFO:0009120] [EFO:0009121] [EFO:0009375] [EFO:0009602] [EFO:0009654] [EFO:0009744] [EFO:0010064] [EFO:1000028] [EFO:1000042] [EFO:1000043] [EFO:1000054] [EFO:1000069] [EFO:1000075] [EFO:1000101] [EFO:1000102] [EFO:1000128] [EFO:1000138] [EFO:1000139] [EFO:1000144] [EFO:1000149] [EFO:1000211] [EFO:1000231] [EFO:1000238] [EFO:1000288] [EFO:1000292] [EFO:1000294] [EFO:1000327] [EFO:1000348] [EFO:1000349] [EFO:1000360] [EFO:1000388] [EFO:1000414] [EFO:1000416] [EFO:1000429] [EFO:1000453] [EFO:1000490] [EFO:1000575] [EFO:1000646] [EFO:1000796] [EFO:1001038] [EFO:1001230] [EFO:1001434] [EFO:1001469] [EFO:1001480] [EFO:1001514] [EFO:1001515] [EFO:1001830] [EFO:1001934] [EFO:1001946] [EFO:1001950] [EFO:1001951] [EFO:1001958] [EFO:1001963] [EFO:1002008] [HP:0000001] [HP:0000002] [HP:0000008] [HP:0000009] [HP:0000014] [HP:0000020] [HP:0000022] [HP:0000023] [HP:0000028] [HP:0000032] [HP:0000035] [HP:0000036] [HP:0000045] [HP:0000047] [HP:0000049] [HP:0000069] [HP:0000076] [HP:0000077] [HP:0000078] [HP:0000079] [HP:0000085] [HP:0000086] [HP:0000089] [HP:0000098] [HP:0000104] [HP:0000107] [HP:0000110] [HP:0000118] [HP:0000119] [HP:0000125] [HP:0000126] [HP:0000137] [HP:0000144] [HP:0000152] [HP:0000153] [HP:0000154] [HP:0000157] [HP:0000159] [HP:0000160] [HP:0000162] [HP:0000163] [HP:0000164] [HP:0000168] [HP:0000172] [HP:0000174] [HP:0000175] [HP:0000177] [HP:0000178] [HP:0000179] [HP:0000193] [HP:0000202] [HP:0000212] [HP:0000215] [HP:0000218] [HP:0000219] [HP:0000233] [HP:0000234] [HP:0000235] [HP:0000236] [HP:0000238] [HP:0000239] [HP:0000240] [HP:0000243] [HP:0000248] [HP:0000252] [HP:0000256] [HP:0000260] [HP:0000268] [HP:0000270] [HP:0000271] [HP:0000276] [HP:0000277] [HP:0000278] [HP:0000280] [HP:0000284] [HP:0000286] [HP:0000288] [HP:0000290] [HP:0000294] [HP:0000301] [HP:0000306] [HP:0000307] [HP:0000308] [HP:0000309] [HP:0000315] [HP:0000316] [HP:0000324] [HP:0000325] [HP:0000326] [HP:0000327] [HP:0000340] [HP:0000341] [HP:0000343] [HP:0000347] [HP:0000356] [HP:0000357] [HP:0000358] [HP:0000359] [HP:0000363] [HP:0000364] [HP:0000365] [HP:0000366] [HP:0000369] [HP:0000370] [HP:0000377] [HP:0000378] [HP:0000383] [HP:0000388] [HP:0000396] [HP:0000403] [HP:0000407] [HP:0000412] [HP:0000414] [HP:0000422] [HP:0000426] [HP:0000429] [HP:0000430] [HP:0000431] [HP:0000436] [HP:0000444] [HP:0000455] [HP:0000463] [HP:0000464] [HP:0000465] [HP:0000470] [HP:0000478] [HP:0000479] [HP:0000486] [HP:0000487] [HP:0000490] [HP:0000492] [HP:0000494] [HP:0000496] [HP:0000498] [HP:0000499] [HP:0000501] [HP:0000504] [HP:0000505] [HP:0000506] [HP:0000508] [HP:0000517] [HP:0000518] [HP:0000520] [HP:0000525] [HP:0000527] [HP:0000532] [HP:0000534] [HP:0000539] [HP:0000540] [HP:0000543] [HP:0000545] [HP:0000548] [HP:0000549] [HP:0000553] [HP:0000556] [HP:0000565] [HP:0000568] [HP:0000574] [HP:0000577] [HP:0000579] [HP:0000581] [HP:0000582] [HP:0000587] [HP:0000589] [HP:0000591] [HP:0000592] [HP:0000593] [HP:0000598] [HP:0000599] [HP:0000601] [HP:0000606] [HP:0000610] [HP:0000612] [HP:0000614] [HP:0000615] [HP:0000639] [HP:0000646] [HP:0000648] [HP:0000649] [HP:0000657] [HP:0000664] [HP:0000668] [HP:0000670] [HP:0000678] [HP:0000680] [HP:0000684] [HP:0000687] [HP:0000691] [HP:0000692] [HP:0000696] [HP:0000699] [HP:0000707] [HP:0000708] [HP:0000716] [HP:0000717] [HP:0000722] [HP:0000726] [HP:0000729] [HP:0000736] [HP:0000739] [HP:0000750] [HP:0000752] [HP:0000759] [HP:0000765] [HP:0000766] [HP:0000767] [HP:0000769] [HP:0000772] [HP:0000774] [HP:0000775] [HP:0000776] [HP:0000795] [HP:0000803] [HP:0000811] [HP:0000812] [HP:0000818] [HP:0000819] [HP:0000820] [HP:0000821] [HP:0000822] [HP:0000824] [HP:0000826] [HP:0000830] [HP:0000836] [HP:0000864] [HP:0000871] [HP:0000924] [HP:0000925] [HP:0000927] [HP:0000929] [HP:0000940] [HP:0000944] [HP:0000951] [HP:0000953] [HP:0000954] [HP:0000957] [HP:0000958] [HP:0000960] [HP:0000964] [HP:0000965] [HP:0000969] [HP:0000973] [HP:0000977] [HP:0000978] [HP:0000980] [HP:0000998] [HP:0001000] [HP:0001007] [HP:0001009] [HP:0001010] [HP:0001018] [HP:0001022] [HP:0001025] [HP:0001027] [HP:0001028] [HP:0001034] [HP:0001045] [HP:0001048] [HP:0001098] [HP:0001107] [HP:0001147] [HP:0001155] [HP:0001159] [HP:0001161] [HP:0001167] [HP:0001171] [HP:0001172] [HP:0001180] [HP:0001182] [HP:0001187] [HP:0001191] [HP:0001193] [HP:0001194] [HP:0001197] [HP:0001211] [HP:0001212] [HP:0001218] [HP:0001220] [HP:0001249] [HP:0001250] [HP:0001252] [HP:0001254] [HP:0001256] [HP:0001257] [HP:0001258] [HP:0001263] [HP:0001270] [HP:0001273] [HP:0001276] [HP:0001290] [HP:0001291] [HP:0001297] [HP:0001298] [HP:0001300] [HP:0001311] [HP:0001317] [HP:0001319] [HP:0001324] [HP:0001328] [HP:0001332] [HP:0001342] [HP:0001344] [HP:0001347] [HP:0001362] [HP:0001363] [HP:0001367] [HP:0001369] [HP:0001370] [HP:0001371] [HP:0001373] [HP:0001374] [HP:0001382] [HP:0001384] [HP:0001385] [HP:0001392] [HP:0001421] [HP:0001435] [HP:0001438] [HP:0001446] [HP:0001476] [HP:0001488] [HP:0001492] [HP:0001507] [HP:0001508] [HP:0001510] [HP:0001511] [HP:0001513] [HP:0001519] [HP:0001520] [HP:0001528] [HP:0001531] [HP:0001537] [HP:0001539] [HP:0001545] [HP:0001547] [HP:0001548] [HP:0001551] [HP:0001555] [HP:0001574] [HP:0001582] [HP:0001591] [HP:0001595] [HP:0001597] [HP:0001598] [HP:0001600] [HP:0001601] [HP:0001608] [HP:0001609] [HP:0001612] [HP:0001622] [HP:0001626] [HP:0001627] [HP:0001629] [HP:0001631] [HP:0001633] [HP:0001634] [HP:0001635] [HP:0001636] [HP:0001637] [HP:0001638] [HP:0001641] [HP:0001642] [HP:0001643] [HP:0001646] [HP:0001647] [HP:0001649] [HP:0001650] [HP:0001654] [HP:0001655] [HP:0001658] [HP:0001667] [HP:0001671] [HP:0001679] [HP:0001680] [HP:0001684] [HP:0001692] [HP:0001707] [HP:0001710] [HP:0001711] [HP:0001713] [HP:0001714] [HP:0001719] [HP:0001760] [HP:0001763] [HP:0001769] [HP:0001770] [HP:0001772] [HP:0001773] [HP:0001780] [HP:0001792] [HP:0001800] [HP:0001814] [HP:0001832] [HP:0001837] [HP:0001838] [HP:0001839] [HP:0001844] [HP:0001850] [HP:0001863] [HP:0001864] [HP:0001868] [HP:0001871] [HP:0001872] [HP:0001873] [HP:0001877] [HP:0001878] [HP:0001883] [HP:0001892] [HP:0001903] [HP:0001920] [HP:0001933] [HP:0001939] [HP:0001941] [HP:0001943] [HP:0001945] [HP:0001955] [HP:0001961] [HP:0001965] [HP:0001999] [HP:0002002] [HP:0002007] [HP:0002011] [HP:0002012] [HP:0002015] [HP:0002017] [HP:0002019] [HP:0002020] [HP:0002023] [HP:0002031] [HP:0002032] [HP:0002037] [HP:0002060] [HP:0002061] [HP:0002063] [HP:0002072] [HP:0002079] [HP:0002086] [HP:0002087] [HP:0002088] [HP:0002090] [HP:0002092] [HP:0002093] [HP:0002094] [HP:0002098] [HP:0002099] [HP:0002104] [HP:0002109] [HP:0002118] [HP:0002119] [HP:0002123] [HP:0002132] [HP:0002134] [HP:0002143] [HP:0002148] [HP:0002162] [HP:0002164] [HP:0002167] [HP:0002170] [HP:0002186] [HP:0002194] [HP:0002197] [HP:0002205] [HP:0002219] [HP:0002240] [HP:0002242] [HP:0002250] [HP:0002263] [HP:0002275] [HP:0002283] [HP:0002286] [HP:0002307] [HP:0002308] [HP:0002311] [HP:0002315] [HP:0002326] [HP:0002342] [HP:0002352] [HP:0002353] [HP:0002360] [HP:0002366] [HP:0002370] [HP:0002371] [HP:0002373] [HP:0002376] [HP:0002414] [HP:0002418] [HP:0002435] [HP:0002438] [HP:0002450] [HP:0002453] [HP:0002475] [HP:0002500] [HP:0002518] [HP:0002553] [HP:0002557] [HP:0002558] [HP:0002564] [HP:0002575] [HP:0002577] [HP:0002583] [HP:0002589] [HP:0002597] [HP:0002607] [HP:0002608] [HP:0002633] [HP:0002644] [HP:0002645] [HP:0002648] [HP:0002650] [HP:0002652] [HP:0002664] [HP:0002683] [HP:0002705] [HP:0002715] [HP:0002719] [HP:0002721] [HP:0002725] [HP:0002748] [HP:0002758] [HP:0002763] [HP:0002777] [HP:0002778] [HP:0002780] [HP:0002783] [HP:0002793] [HP:0002795] [HP:0002803] [HP:0002813] [HP:0002814] [HP:0002815] [HP:0002817] [HP:0002823] [HP:0002825] [HP:0002827] [HP:0002857] [HP:0002861] [HP:0002921] [HP:0002926] [HP:0002937] [HP:0002944] [HP:0002967] [HP:0002977] [HP:0002979] [HP:0002981] [HP:0002991] [HP:0003011] [HP:0003019] [HP:0003026] [HP:0003028] [HP:0003038] [HP:0003043] [HP:0003072] [HP:0003074] [HP:0003111] [HP:0003117] [HP:0003121] [HP:0003124] [HP:0003128] [HP:0003196] [HP:0003201] [HP:0003202] [HP:0003271] [HP:0003272] [HP:0003312] [HP:0003319] [HP:0003330] [HP:0003336] [HP:0003366] [HP:0003368] [HP:0003393] [HP:0003422] [HP:0003468] [HP:0003498] [HP:0003549] [HP:0003693] [HP:0003765] [HP:0003781] [HP:0003808] [HP:0003839] [HP:0004050] [HP:0004097] [HP:0004099] [HP:0004207] [HP:0004209] [HP:0004233] [HP:0004275] [HP:0004297] [HP:0004298] [HP:0004299] [HP:0004305] [HP:0004322] [HP:0004323] [HP:0004324] [HP:0004325] [HP:0004328] [HP:0004329] [HP:0004348] [HP:0004349] [HP:0004360] [HP:0004363] [HP:0004370] [HP:0004372] [HP:0004375] [HP:0004378] [HP:0004383] [HP:0004386] [HP:0004387] [HP:0004397] [HP:0004404] [HP:0004414] [HP:0004442] [HP:0004467] [HP:0004474] [HP:0004626] [HP:0004691] [HP:0004692] [HP:0004749] [HP:0004755] [HP:0004814] [HP:0004885] [HP:0004890] [HP:0004912] [HP:0004930] [HP:0004960] [HP:0004971] [HP:0004991] [HP:0005105] [HP:0005107] [HP:0005110] [HP:0005114] [HP:0005115] [HP:0005120] [HP:0005133] [HP:0005233] [HP:0005257] [HP:0005258] [HP:0005264] [HP:0005280] [HP:0005288] [HP:0005301] [HP:0005345] [HP:0005425] [HP:0005484] [HP:0005487] [HP:0005556] [HP:0005599] [HP:0005605] [HP:0005607] [HP:0005616] [HP:0005651] [HP:0005656] [HP:0005684] [HP:0005692] [HP:0005701] [HP:0005709] [HP:0005750] [HP:0005781] [HP:0005815] [HP:0005876] [HP:0005918] [HP:0005920] [HP:0005924] [HP:0005927] [HP:0005930] [HP:0005978] [HP:0006210] [HP:0006257] [HP:0006261] [HP:0006265] [HP:0006292] [HP:0006347] [HP:0006380] [HP:0006466] [HP:0006481] [HP:0006482] [HP:0006483] [HP:0006487] [HP:0006492] [HP:0006493] [HP:0006494] [HP:0006496] [HP:0006504] [HP:0006505] [HP:0006510] [HP:0006532] [HP:0006536] [HP:0006541] [HP:0006665] [HP:0006704] [HP:0006705] [HP:0006709] [HP:0006772] [HP:0006801] [HP:0006824] [HP:0007018] [HP:0007099] [HP:0007109] [HP:0007149] [HP:0007256] [HP:0007319] [HP:0007364] [HP:0007367] [HP:0007370] [HP:0007379] [HP:0007400] [HP:0007441] [HP:0007477] [HP:0007513] [HP:0007565] [HP:0007598] [HP:0007633] [HP:0007678] [HP:0007700] [HP:0007730] [HP:0007858] [HP:0007898] [HP:0007911] [HP:0007930] [HP:0007946] [HP:0007970] [HP:0008034] [HP:0008050] [HP:0008051] [HP:0008056] [HP:0008067] [HP:0008069] [HP:0008070] [HP:0008209] [HP:0008365] [HP:0008373] [HP:0008386] [HP:0008388] [HP:0008404] [HP:0008491] [HP:0008519] [HP:0008544] [HP:0008551] [HP:0008572] [HP:0008678] [HP:0008696] [HP:0008771] [HP:0008772] [HP:0008776] [HP:0008872] [HP:0008873] [HP:0008905] [HP:0008936] [HP:0008942] [HP:0008947] [HP:0008954] [HP:0009115] [HP:0009116] [HP:0009117] [HP:0009118] [HP:0009121] [HP:0009122] [HP:0009123] [HP:0009127] [HP:0009129] [HP:0009130] [HP:0009142] [HP:0009144] [HP:0009179] [HP:0009380] [HP:0009381] [HP:0009466] [HP:0009473] [HP:0009484] [HP:0009485] [HP:0009553] [HP:0009600] [HP:0009601] [HP:0009602] [HP:0009603] [HP:0009617] [HP:0009623] [HP:0009641] [HP:0009725] [HP:0009726] [HP:0009733] [HP:0009765] [HP:0009767] [HP:0009774] [HP:0009775] [HP:0009778] [HP:0009804] [HP:0009810] [HP:0009811] [HP:0009815] [HP:0009826] [HP:0009832] [HP:0009835] [HP:0009887] [HP:0009889] [HP:0009891] [HP:0009895] [HP:0009896] [HP:0009899] [HP:0009918] [HP:0009924] [HP:0009929] [HP:0009937] [HP:0009997] [HP:0010055] [HP:0010057] [HP:0010066] [HP:0010100] [HP:0010161] [HP:0010181] [HP:0010230] [HP:0010301] [HP:0010438] [HP:0010442] [HP:0010460] [HP:0010461] [HP:0010490] [HP:0010491] [HP:0010508] [HP:0010518] [HP:0010529] [HP:0010535] [HP:0010549] [HP:0010550] [HP:0010551] [HP:0010566] [HP:0010576] [HP:0010579] [HP:0010621] [HP:0010624] [HP:0010628] [HP:0010647] [HP:0010651] [HP:0010660] [HP:0010674] [HP:0010720] [HP:0010758] [HP:0010759] [HP:0010767] [HP:0010781] [HP:0010783] [HP:0010786] [HP:0010788] [HP:0010808] [HP:0010827] [HP:0010862] [HP:0010864] [HP:0010866] [HP:0010876] [HP:0010927] [HP:0010929] [HP:0010935] [HP:0010936] [HP:0010938] [HP:0010944] [HP:0010946] [HP:0010978] [HP:0010993] [HP:0011003] [HP:0011004] [HP:0011013] [HP:0011014] [HP:0011015] [HP:0011024] [HP:0011025] [HP:0011028] [HP:0011029] [HP:0011032] [HP:0011035] [HP:0011039] [HP:0011061] [HP:0011098] [HP:0011119] [HP:0011121] [HP:0011122] [HP:0011123] [HP:0011138] [HP:0011218] [HP:0011220] [HP:0011228] [HP:0011231] [HP:0011250] [HP:0011276] [HP:0011282] [HP:0011283] [HP:0011297] [HP:0011298] [HP:0011314] [HP:0011328] [HP:0011329] [HP:0011335] [HP:0011337] [HP:0011339] [HP:0011342] [HP:0011354] [HP:0011355] [HP:0011356] [HP:0011357] [HP:0011358] [HP:0011361] [HP:0011362] [HP:0011389] [HP:0011398] [HP:0011409] [HP:0011442] [HP:0011443] [HP:0011446] [HP:0011451] [HP:0011458] [HP:0011466] [HP:0011470] [HP:0011471] [HP:0011476] [HP:0011481] [HP:0011603] [HP:0011641] [HP:0011675] [HP:0011723] [HP:0011729] [HP:0011747] [HP:0011772] [HP:0011792] [HP:0011793] [HP:0011799] [HP:0011804] [HP:0011805] [HP:0011821] [HP:0011833] [HP:0011842] [HP:0011843] [HP:0011844] [HP:0011849] [HP:0011873] [HP:0011895] [HP:0011927] [HP:0011937] [HP:0011947] [HP:0011968] [HP:0011973] [HP:0011994] [HP:0012031] [HP:0012032] [HP:0012106] [HP:0012116] [HP:0012125] [HP:0012165] [HP:0012210] [HP:0012243] [HP:0012252] [HP:0012303] [HP:0012304] [HP:0012371] [HP:0012372] [HP:0012373] [HP:0012374] [HP:0012385] [HP:0012393] [HP:0012443] [HP:0012444] [HP:0012503] [HP:0012531] [HP:0012539] [HP:0012638] [HP:0012639] [HP:0012700] [HP:0012718] [HP:0012719] [HP:0012725] [HP:0012732] [HP:0012736] [HP:0012757] [HP:0012758] [HP:0012759] [HP:0012785] [HP:0012795] [HP:0030084] [HP:0032241] [HP:0032322] [HP:0100006] [HP:0100013] [HP:0100022] [HP:0100031] [HP:0100037] [HP:0100255] [HP:0100257] [HP:0100276] [HP:0100277] [HP:0100279] [HP:0100280] [HP:0100282] [HP:0100309] [HP:0100326] [HP:0100360] [HP:0100490] [HP:0100491] [HP:0100526] [HP:0100529] [HP:0100533] [HP:0100538] [HP:0100542] [HP:0100543] [HP:0100545] [HP:0100547] [HP:0100555] [HP:0100556] [HP:0100559] [HP:0100594] [HP:0100615] [HP:0100627] [HP:0100651] [HP:0100656] [HP:0100659] [HP:0100660] [HP:0100665] [HP:0100705] [HP:0100736] [HP:0100737] [HP:0100738] [HP:0100742] [HP:0100746] [HP:0100755] [HP:0100763] [HP:0100764] [HP:0100790] [HP:0100806] [HP:0100807] [HP:0100817] [HP:0100836] [HP:0100851] [HP:0100852] [HP:0100871] [HP:0100876] [HP:0100886] [HP:0100887] [HP:0200006] [HP:0200007] [HP:0200013] [HP:0200021] [HP:0200053] [HP:0200055] [MONDO:0000870] [MONDO:0001056] [MONDO:0002025] [MONDO:0002038] [MONDO:0002367] [MONDO:0002397] [MONDO:0002601] [MONDO:0002627] [MONDO:0002630] [MONDO:0002631] [MONDO:0002678] [MONDO:0002728] [MONDO:0002898] [MONDO:0003142] [MONDO:0003537] [MONDO:0003572] [MONDO:0003751] [MONDO:0004050] [MONDO:0004301] [MONDO:0004950] [MONDO:0004952] [MONDO:0005005] [MONDO:0005010] [MONDO:0005052] [MONDO:0005062] [MONDO:0005184] [MONDO:0005252] [MONDO:0005301] [MONDO:0005306] [MONDO:0005575] [MONDO:0005814] [MONDO:0006058] [MONDO:0007254] [MONDO:0007255] [MONDO:0007256] [MONDO:0007257] [MONDO:0007258] [MONDO:0007259] [MONDO:0007260] [MONDO:0007261] [MONDO:0007262] [MONDO:0007263] [MONDO:0007264] [MONDO:0007265] [MONDO:0007266] [MONDO:0007267] [MONDO:0007268] [MONDO:0007269] [MONDO:0007270] [MONDO:0007271] [MONDO:0007272] [MONDO:0007273] [MONDO:0007274] [MONDO:0007275] [MONDO:0007276] [MONDO:0007277] [MONDO:0007278] [MONDO:0007279] [MONDO:0007280] [MONDO:0007281] [MONDO:0007282] [MONDO:0007283] [MONDO:0007284] [MONDO:0007285] [MONDO:0007286] [MONDO:0007287] [MONDO:0007288] [MONDO:0007289] [MONDO:0007290] [MONDO:0007291] [MONDO:0007292] [MONDO:0007293] [MONDO:0007294] [MONDO:0007295] [MONDO:0007296] [MONDO:0007297] [MONDO:0007298] [MONDO:0007299] [MONDO:0007301] [MONDO:0007302] [MONDO:0007303] [MONDO:0007304] [MONDO:0007305] [MONDO:0007306] [MONDO:0007307] [MONDO:0007308] [MONDO:0007309] [MONDO:0007310] [MONDO:0007311] [MONDO:0007312] [MONDO:0007313] [MONDO:0007314] [MONDO:0007315] [MONDO:0007316] [MONDO:0007317] [MONDO:0007318] [MONDO:0007319] [MONDO:0007320] [MONDO:0007321] [MONDO:0007322] [MONDO:0007323] [MONDO:0007324] [MONDO:0007325] [MONDO:0007326] [MONDO:0007328] [MONDO:0007329] [MONDO:0007330] [MONDO:0007331] [MONDO:0007332] [MONDO:0007333] [MONDO:0007334] [MONDO:0007335] [MONDO:0007336] [MONDO:0007337] [MONDO:0007338] [MONDO:0007339] [MONDO:0007340] [MONDO:0007341] [MONDO:0007342] [MONDO:0007343] [MONDO:0007344] [MONDO:0007345] [MONDO:0007346] [MONDO:0007347] [MONDO:0007348] [MONDO:0007349] [MONDO:0007350] [MONDO:0007351] [MONDO:0007352] [MONDO:0007353] [MONDO:0007354] [MONDO:0007355] [MONDO:0007356] [MONDO:0007357] [MONDO:0007358] [MONDO:0007359] [MONDO:0007360] [MONDO:0007361] [MONDO:0007362] [MONDO:0007363] [MONDO:0007364] [MONDO:0007365] [MONDO:0007366] [MONDO:0007367] [MONDO:0007368] [MONDO:0007369] [MONDO:0007370] [MONDO:0007371] [MONDO:0007372] [MONDO:0007432] [MONDO:0007576] [MONDO:0008170] [MONDO:0008903] [MONDO:0013296] [MONDO:0015760] [MONDO:0016690] [MONDO:0016691] [MONDO:0016700] [MONDO:0016735] [MONDO:0017043] [MONDO:0017349] [MONDO:0017387] [MONDO:0017590] [MONDO:0018874] [MONDO:0018905] [MONDO:0018906] [MONDO:0018908] [MONDO:0019087] [MONDO:0019470] [MONDO:0019474] [MONDO:0020511] [MONDO:0020560] [MONDO:0020580] [MONDO:0020663] [MONDO:0021335] [MONDO:0044335] [MONDO:0100096] [NCIT:C0549184] [NCIT:C115935] [NCIT:C200033] [NCIT:C27204] [NCIT:C2952] [NCIT:C3099] [NCIT:C3283] [NCIT:C3468] [NCIT:C4737] [NCIT:C4873] [NCIT:C8852] [Orphanet:252202] [Orphanet:2585] [Orphanet:269] [Orphanet:3095] [Orphanet:399] [Orphanet:51083] [Orphanet:544] [Orphanet:552] [Orphanet:654] [Orphanet:768] [Orphanet:98892] [PATO:0000461] [PATO:0000463] [PATO:0000464] [PATO:0000465] [PATO:0000466] [PATO:0000468] [PATO:0000469] [PATO:0000470] [PATO:0000471] [PATO:0000472] [UBERON:0000178] [UBERON:0000310] [UBERON:0000397] [UBERON:0000992] [UBERON:0001134] [UBERON:0001156] [UBERON:0001159] [UBERON:0001968] [UBERON:0002046] [UBERON:0002107] [UBERON:0002328] [UBERON:0002371] [UBERON:0002372] [UBERON:0003483] [UBERON:0003889] [UBERON:0005351] [UBERON:0010393] [UBERON:0012168] [UBERON:0013756]

Duo

0000001 0000004 0000005 0000006 0000007 0000010 0000011 0000012 0000014 0000015 0000016 0000017 0000018 0000019 0000020 0000021 0000022 0000024 0000025 0000026 0000027 0000028 0000029 0000042 0000043 0000044 0000045 0000046

Clear

A95653B

Whole genome sequencing for single cells for library A95653B 1342 cells; filetype=bam
Dataset EGAD00001007107
10x Genomics Single Cell Gene Expression for SA535X6XB03101

10x Genomics Single Cell Gene Expression for Triple negative breast cancer patient-derived xenograft SA535 passage 6
Dataset EGAD00001009149
10x Genomics Single Cell Gene Expression for SA535X5XB02891

10x Genomics Single Cell Gene Expression for Triple negative breast cancer patient-derived xenograft SA535 passage 5
Dataset EGAD00001009155
10x Genomics Single Cell Gene Expression for SA535X5XB02895

10x Genomics Single Cell Gene Expression for Triple negative breast cancer patient-derived xenograft SA535 passage 5
Dataset EGAD00001009156
10x Genomics Single Cell Gene Expression for SA604X9XB02425

10x Genomics Single Cell Gene Expression for Triple negative breast cancer patient-derived xenograft SA604 passage 9
Dataset EGAD00001009159
10x Genomics Single Cell Gene Expression for SA535X4XB02498

10x Genomics Single Cell Gene Expression for Triple negative breast cancer patient-derived xenograft SA535 passage 4
Dataset EGAD00001009152
A96180B

Whole genome sequencing for single cells for library A96180B 1189 samples; filetype=bam
Dataset EGAD00001008246
A96179B

Whole genome sequencing for single cells for library A96179B 1396 samples; filetype=bam
Dataset EGAD00001008245
A118833A

Whole genome sequencing for single cells for library A118833A 919 cells; filetype=bam
Dataset EGAD00001007096
A118833B

Whole genome sequencing for single cells for library A118833B 1147 cells; filetype=bam
Dataset EGAD00001007097

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