22950 results for "ega"

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• PACA-CA Whole Genome Sequence bam files

  Merged bam files for PACA-CA Whole Genome Sequencing, for DCC release 25

  Dataset EGAD00001003591

• Reference epigenome SMC09_ChIP-Seq(H3K27me3) data generated from KEP study

  A SMC09_ChIP-Seq(H3K27me3) paired end data for skeletal muscle cells

  Dataset EGAD00001003853

• Reference epigenome SMC02_ChIP-Seq(H3K27me3) data generated from KEP study

  A SMC02_ChIP-Seq(H3K27me3) paired end data for skeletal muscle cells

  Dataset EGAD00001003846

• ECA WES and RNAseq data

  40 samples of WES and their normal controls; 33 samples of RNAseq data.

  Dataset EGAD00001006740

• Reference epigenome Pancreas-Islet07 miRNA-Seq data generated from KEP study

  Pancreas-Islet07 miRNA-Seq single end data

  Dataset EGAD00001007188

• SCLC study Peifer et al. - WES dataset

  SCLC - Whole genome sequencing data Publication Peifer et al., 2012, Nature Genetics

  Dataset EGAD00001000703

• Targeted capture ctDNA Library CRCQV42Run022-20

  Targeted capture ctDNA Library CRCQV42Run022-20 from patient PBC0001845, plasma 12 month repeat sample

  Dataset EGAD00001010455

• scWGS chordblood

  Single cell WGS (low pass) for chord blood samples

  Dataset EGAD00001006136

• Next Generation Sequencing in an IBD Pedigree Exome Data

  The aim is to find rare variants of intermediate penetrance in those at risk of Crohn's disease

  Dataset EGAD00001000423

• SCCOHT

  Exome sequencing of familial and sporadic small cell cancer of ovary cases.

  Dataset EGAD00001000791

• Reference epigenome SMC06_WGBS data generated from KEP study

  A SMC06_WGBS paired end data for skeletal muscle cells

  Dataset EGAD00001003874

• 13 WGS samples

  13 samples were processed by whole genome sequencing

  Dataset EGAD00001007522

• Brain mets discovery cohort, orthogonal validation raw sequencing files

  These are the raw sequencing files for the orthogonal validation brain tumour samples in the discovery cohort.

  Dataset EGAD00001005985

• Exome Sequencing Of 75 Individuals From Multiply Affected Coeliac Families

  Exome bam files of 75 Individuals From Multiply Affected Coeliac Families

  Dataset EGAD00001001269

• Single-cell DNA-seq

  Single-cell DNA sequencing (scDNA-seq) data.

  Dataset EGAD00001008779

• Reference epigenome Islet-derived_MSC08 miRNA-Seq data generated from KEP study

  Islet-derived_MSC08 miRNA-Seq single end data

  Dataset EGAD00001007882

• Reference epigenome Islet-derived_iPSC04 miRNA-Seq data generated from KEP study

  Islet-derived_iPSC04 miRNA-Seq single end data

  Dataset EGAD00001007883

• Reference epigenome SMC07_WGBS data generated from KEP study

  A SMC07_WGBS paired end data for skeletal muscle cells

  Dataset EGAD00001003875

• cHCC-ICC WGS

  Whole genome sequencing dataset of 54 tumor/normal samples of 25 cHCC-ICC cases.

  Dataset EGAD00001005181

• WGBS for APL

  Whole genome bisulfite sequencing (WGBS) for APL

  Dataset EGAD00001008136

• oxBS-seq for APL

  Oxidative bisulfite sequencing (oxBS-Seq) for APL

  Dataset EGAD00001008135

• HiC files for Zhang GenomePaint paper

  HiC files for GenomePaint paper titled "Exploration of coding and non-coding variants in cancer using GenomePaint."

  Dataset EGAD00001006678

• Targeted capture ctDNA Library CRCQV34Run005-12

  Targeted capture ctDNA Library CRCQV34Run005-12 from patient PBC0001224, TNBC FFPE sample

  Dataset EGAD00001010343

• Targeted capture ctDNA Library CRCQV34Run005-9

  Targeted capture ctDNA Library CRCQV34Run005-9 from patient PBC0002429, TNBC FFPE sample

  Dataset EGAD00001010352

• Targeted capture ctDNA Library CRCQV34Run005-8

  Targeted capture ctDNA Library CRCQV34Run005-8 from patient PBC0002108, TNBC FFPE sample

  Dataset EGAD00001010351

• Targeted capture ctDNA Library CRCQV40Run027-22

  Targeted capture ctDNA Library CRCQV40Run027-22 from patient PBC0005116, TNBC FFPE sample

  Dataset EGAD00001010394

• Targeted capture ctDNA Library CRCQV40Run027-20

  Targeted capture ctDNA Library CRCQV40Run027-20 from patient PBC0004565, TNBC FFPE sample

  Dataset EGAD00001010393

• Targeted capture ctDNA Library CRCQV42Run020-5

  Targeted capture ctDNA Library CRCQV42Run020-5 from patient PBC0001315, TNBC FFPE sample

  Dataset EGAD00001010431

• Targeted capture ctDNA Library CRCQV42Run021-12

  Targeted capture ctDNA Library CRCQV42Run021-12 from patient PBC0001653, TNBC FFPE sample

  Dataset EGAD00001010435

• Human adipocyte bulk RNA-seq dataset

  The dataset contains raw RNA-seq data of human adipocytes from 13 individuals.

  Dataset EGAD00001008335

• Targeted capture ctDNA Library CRCQV42Run022-19

  Targeted capture ctDNA Library CRCQV42Run022-19 from patient PBC0002680, plasma 6 month repeat sample

  Dataset EGAD00001010454

• Targeted capture ctDNA Library CRCQV42Run024-13

  Targeted capture ctDNA Library CRCQV42Run024-13 from patient PBC0001306, TNBC FFPE sample

  Dataset EGAD00001010466

• Targeted capture ctDNA Library CRCQV42Run026-16

  Targeted capture ctDNA Library CRCQV42Run026-16 from patient PBC0005064, TNBC FFPE sample

  Dataset EGAD00001010489

• Whole Exome Sequencing of Diffuse Glioma Samples

  This dataset contains FASTQ files obtained through whole exome sequencing of glioma and matched blood samples.

  Dataset EGAD00001004144

• Reference epigenome KNIH011 mRNA-seq data generated from KEP study

  A KNIH011 mRNA-seq paired end data for podocytes

  Dataset EGAD00001002177

• WES

  WES was performed on 2 TURP, 6 biopsies, 1 CDX, 1 cell line, 6 CTCs, 1 DNA germline and 1WBC from prostate cancer

  Dataset EGAD00001006009

• Multi-region WGS of a RET fusion positive cancer

  high depth WGS sequencing of 8 sites of a RET fusion tumour

  Dataset EGAD00001006878

• Dataset for iAMP21 scRNA-seq

  10x Genomics 5' library scRNA-seq data for 4 iAMP21 patients

  Dataset EGAD00001009504

• WGS data set used in the study, 2 samples

  WGS data set used in the study, 2 samples

  Dataset EGAD00001007966

• Targeted capture ctDNA Library CRCQV42Run42-13

  Targeted capture ctDNA Library CRCQV42Run42-13 from patient PBC0001467, TNBC FFPE sample

  Dataset EGAD00001010825

• KCL PRECSION SNP

  KCL SNP array samples for copy number analysis

  Dataset EGAD00001008379

• RNA-Seq for academic use only

  RNA-Seq transcriptome data is only for academic use.

  Dataset EGAD00001009675

• ML modeling data & code

  Rmarkdown code, PDF, and Rdata file to recapitulate the paper's primary figures and machine learning model development.

  Dataset EGAD00001009764

• Dataset for "Intratumoral Heterogeneity and Clonal Evolution Induced by HPV Integration" (ONT)

  Dataset for "Intratumoral Heterogeneity and Clonal Evolution Induced by HPV Integration" (ONT)

  Dataset EGAD00001009632

• Reference epigenome Pancreas-Islet08 miRNA-Seq data generated from KEP study

  Pancreas-Islet08 miRNA-Seq single end data

  Dataset EGAD00001007189

• Targeted capture ctDNA Library CRCQV42Run021-4

  Targeted capture ctDNA Library CRCQV42Run021-4 from patient PBC0001328, TNBC FFPE sample

  Dataset EGAD00001010446

• Reference epigenome CKD23_C_Mesan_mRNA-Seq data generated from KEP study

  A CKD23_C_Mesan_mRNA-Seq paired end data for Mesangial cells(kidney)

  Dataset EGAD00001003481

• t(14,18) negative diffuse follicular lymphoma with 1p36 deletion

  Whole Exome Sequencing reads consisting of BAM paired end reads from Follicular Lymphoma samples.

  Dataset EGAD00001004386

• Reference epigenome Islet-derived_MSC08 mRNA-Seq data generated from KEP study

  Islet-derived_MSC08 mRNA-Seq paired end data

  Dataset EGAD00001007879

• Footprint_batch02

  Intrahepatic cholangiocyte organoid clone from patients with chronic alcohol consumption, NASH (nonalcoholic steatohepatitis), and PSC (primary sclerosing cholangitis)

  Dataset EGAD00001007775