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• Endogenous CD4+ T Cells Recognize Neoantigens in Lung Cancer Patients, including KRAS and ERBB2 (Her2) Driver Mutations

  Neoantigen-specific T cell responses were characterized in 4 patients with non-small cell lung cancer. Candidate neoantigens were identified by sequencing tumor and normal DNA from each patient, and ranking single nucleotide variants by expression. Multiple T cell responses were isolated, and in two patients with lung adenocarcinoma, CD4+ T cell responses to recurrent oncogenic mutations in KRAS and Her2 were identified.

  Study phs001805

• Pilot Sequencing Study: DNA Hydroxymethylation and Gene Expression in Peripheral Blood Mononuclear Cells in Healthy Human Aging

  This study was a pilot analysis of samples of human peripheral blood mononuclear cell (PBMCs) from 10 young (23-30 years) and 10 older (68-76 years) healthy Caucasian female volunteers. Whole genome sequencing was performed to assess multiple epigenetic mechanisms and gene expression, including 5hmC-capture sequencing and RNA-sequencing, followed by integrative analyses to identify regions and genes associated with age.

  Study phs001916

• A73044B

  Whole genome sequencing for single cells for library A73044B 2085 cells; filetype=bam

  Dataset EGAD00001007101

• A73047D

  Whole genome sequencing for single cells for library A73047D 2091 cells; filetype=bam

  Dataset EGAD00001007102

• A95633B

  Whole genome sequencing for single cells for library A95633B 2259 cells; filetype=bam

  Dataset EGAD00001007104

• A96115A

  Whole genome sequencing for single cells for library A96115A 1635 cells; filetype=bam

  Dataset EGAD00001007111

• A96193B

  Whole genome sequencing for single cells for library A96193B 2410 cells; filetype=bam

  Dataset EGAD00001007118

• A96240B

  Whole genome sequencing for single cells for library A96240B 1683 cells; filetype=bam

  Dataset EGAD00001007122

• A95623A

  Whole genome sequencing for single cells for library A95623A 1897 cells; filetype=bam

  Dataset EGAD00001007607

• A95668B

  Whole genome sequencing for single cells for library A95668B 1905 cells; filetype=bam

  Dataset EGAD00001007609

• A95720A

  Whole genome sequencing for single cells for library A95720A 1467 cells; filetype=bam

  Dataset EGAD00001007613

• A96190A

  Whole genome sequencing for single cells for library A96190A 1833 cells; filetype=bam

  Dataset EGAD00001007620

• A96233B

  Whole genome sequencing for single cells for library A96233B 1601 cells; filetype=bam

  Dataset EGAD00001007623

• A98234B

  Whole genome sequencing for single cells for library A98234B 1600 cells; filetype=bam

  Dataset EGAD00001007627

• A98304A

  Whole genome sequencing for single cells for library A98304A 1560 cells; filetype=bam

  Dataset EGAD00001007636

• A108851B

  Whole genome sequencing for single cells for library A108851B 1681 cells; filetype=bam

  Dataset EGAD00001007596

• A108870A

  Whole genome sequencing for single cells for library A108870A 1795 cells; filetype=bam

  Dataset EGAD00001007598

• A95724B

  Whole genome sequencing for single cells for library A95724B 581 samples; filetype=bam

  Dataset EGAD00001008230

• A96172A

  Whole genome sequencing for single cells for library A96172A 1476 samples; filetype=bam

  Dataset EGAD00001008240

• A95724A

  Whole genome sequencing for single cells for library A95724A 503 samples; filetype=bam

  Dataset EGAD00001008229

• A96146A

  Whole genome sequencing for single cells for library A96146A 1195 samples; filetype=bam

  Dataset EGAD00001008233

• A96149B

  Whole genome sequencing for single cells for library A96149B 1792 samples; filetype=bam

  Dataset EGAD00001008235

• A96162B

  Whole genome sequencing for single cells for library A96162B 1316 samples; filetype=bam

  Dataset EGAD00001008238

• A96172B

  Whole genome sequencing for single cells for library A96172B 1694 samples; filetype=bam

  Dataset EGAD00001008241

• A96175C

  Whole genome sequencing for single cells for library A96175C 1473 samples; filetype=bam

  Dataset EGAD00001008243

• A96179B

  Whole genome sequencing for single cells for library A96179B 1396 samples; filetype=bam

  Dataset EGAD00001008245

• A96180B

  Whole genome sequencing for single cells for library A96180B 1189 samples; filetype=bam

  Dataset EGAD00001008246

• A96183C

  Whole genome sequencing for single cells for library A96183C 1036 samples; filetype=bam

  Dataset EGAD00001008247

• A96184A

  Whole genome sequencing for single cells for library A96184A 1733 samples; filetype=bam

  Dataset EGAD00001008248

• A96186A

  Whole genome sequencing for single cells for library A96186A 850 samples; filetype=bam

  Dataset EGAD00001008249

• A96186C

  Whole genome sequencing for single cells for library A96186C 525 samples; filetype=bam

  Dataset EGAD00001008250

• A96199B

  Whole genome sequencing for single cells for library A96199B 1170 samples; filetype=bam

  Dataset EGAD00001008251

• A96201A

  Whole genome sequencing for single cells for library A96201A 536 samples; filetype=bam

  Dataset EGAD00001008252

• A96205A

  Whole genome sequencing for single cells for library A96205A 1907 samples; filetype=bam

  Dataset EGAD00001008253

• A96210C

  Whole genome sequencing for single cells for library A96210C 1191 samples; filetype=bam

  Dataset EGAD00001008254

• A96211C

  Whole genome sequencing for single cells for library A96211C 1397 samples; filetype=bam

  Dataset EGAD00001008255

• A96215A

  Whole genome sequencing for single cells for library A96215A 1312 samples; filetype=bam

  Dataset EGAD00001008256

• A96216A

  Whole genome sequencing for single cells for library A96216A 1001 samples; filetype=bam

  Dataset EGAD00001008257

• A96220B

  Whole genome sequencing for single cells for library A96220B 1267 samples; filetype=bam

  Dataset EGAD00001008258

• A96244A

  Whole genome sequencing for single cells for library A96244A 1374 samples; filetype=bam

  Dataset EGAD00001008259

• A98176A

  Whole genome sequencing for single cells for library A98176A 1003 samples; filetype=bam

  Dataset EGAD00001008260

• A98176B

  Whole genome sequencing for single cells for library A98176B 1389 samples; filetype=bam

  Dataset EGAD00001008261

• A98284A

  Whole genome sequencing for single cells for library A98284A 1265 samples; filetype=bam

  Dataset EGAD00001008262

• A98284B

  Whole genome sequencing for single cells for library A98284B 1582 samples; filetype=bam

  Dataset EGAD00001008263

• A98289B

  Whole genome sequencing for single cells for library A98289B 1032 samples; filetype=bam

  Dataset EGAD00001008264

• A98293B

  Whole genome sequencing for single cells for library A98293B 703 samples; filetype=bam

  Dataset EGAD00001008265

• Tumour sample for patient SA667

  Whole genome sequencing of tumour sample for triple negative breast cancer patient SA667

  Dataset EGAD00001009210

• Tumour sample for patient SA668

  Whole genome sequencing of tumour sample for triple negative breast cancer patient SA668

  Dataset EGAD00001009211

• Tumour sample for patient SA669

  Whole genome sequencing of tumour sample for triple negative breast cancer patient SA669

  Dataset EGAD00001009212

• Tumour sample for patient SA671

  Whole genome sequencing of tumour sample for triple negative breast cancer patient SA671

  Dataset EGAD00001009213