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• leukemia SNP6.0

  Over 1.87 million SNP and CNV loci are screened by Affymetrix SNP 6.0 array

  Dataset EGAD00010001637

• Copy Number Arrays for study EGAS00001004165

  Copy Number Alterations arrays from 153 samples performed by Affymetrix 6.0 and Oncoscan CNV platforms

  Dataset EGAD00010001841

• Whole-genome and transcriptome sequencing of seven patients with gene therapy-induced T-cell acute lymphoblastic leukemia

  Dataset EGAD00001006016

• Identifying the role of ID3 in DNA repair and maintenance of genome integrity (ATAC-seq)

  Dataset EGAD00001008199

• Sequencing data for oesophageal and related samples - OACs release 5 (RNA)

  Dataset EGAD00001005383

• Sequencing data for oesophageal and related samples - Normals release 6 (RNA)

  Dataset EGAD00001005376

• Sequencing data for oesophageal and related samples - BOs release 6 (RNA)

  Dataset EGAD00001005377

• Sequencing data for oesophageal and related samples - OACs release 4 (RNA)

  Dataset EGAD00001004021

• bulk TCR seq

  bulk TCR-seq data IMCISION on the PBMCs of responding patients bulkTCR-seq data generated with the immunoSEQ platform (Adaptive Biotechnologies) on PBMCs of responding patients, pre- and post-treatment.

  Dataset EGAD00010002546

• Batch2_Genotypes_Raw

  Genotypes generated for Puno cohort Batch 2. Case (PRE) and control (PUN) families were recruited in hospital. Raw genotypes no QC. Includes unrelated genotyping controls (HG).

  Dataset EGAD00010002124

• Clinical data IMvigor130 cohort

  Clinical data for IMvigor130 cohort of patients, including treatment, response, survial time, and tumor PDL1-IC staining score.

  Dataset EGAD50000000143

• CD8 T cell PBMC metadata

  Cell annotation for single CD8 T cells of PBMC collected from 113 patients, including UMAP coordinates and annotation

  Dataset EGAD50000000144

• Induced pluripotent stem cell derived pericytes respond to mediators of proliferation and contractility

  Differentiation of mesoderm pericytes from induced pluripotent stem cell lines.

  Study EGAS50000000176

• Short-read transcriptomic data

  Short-read transcriptomic data of unaffected control, expansion negative, and expansion positive FECD CECs

  Dataset EGAD50000000436

• MM GWAS dataset

  This is a meta-analysis of myeloma datasets, both with and without the UK Biobank cohort included.

  Dataset EGAD50000000422

• Breast Invasive Lobular Carcinoma CDH1 WGS dataset

  We subjected to whole genome sequencing (WGS) one ILC case lacking CDH1 biallelic mutations. Both tumor and normal samples were sequenced.

  Dataset EGAD50000000696

• Targeted nanopore sequencing of FGF14 repeat expansions

  This dataset includes FASTQ files from FGF14 alleles sequenced by targeted nanopore in 67 patients, 64 control individuals and three unaffected relatives.

  Dataset EGAD50000000692

• Comparison of good PDX responders and bad PDX responders

  RNA-Seq raw data of untreated breast cancer xenografts known as good or bad acetalax responders.

  Dataset EGAD50000000876

• WES of HNSCC PDX models

  Whole exome sequencing of cetuximab-sensitive and -resistant patient-derived xenograft models from two HNSCC patients.

  Dataset EGAD50000001176

• VHIR Renal Physiopathology Group DAC

  This DAC describes the members of the Data Access Committee and the policy that will regulate access to the datasets uploaded at EGA from the Renal Phyisiopathology Group at VHIR

  Dac EGAC50000000510

• RNA-Seq of SMARCB1 re-expression and HDAC+mTOR inhibition experiments in malignant rhabdoid tumor organoids

  Dataset EGAD00001006574

• WGBS of stepwise-edited melanoma model

  This dataset contains WGBS of a stepwise-edited, human melanoma model including in vitro samples and corresponding xenografts.

  Dataset EGAD50000001317

• AVENIO mutation analysis

  Mutation analysis in cfDNA from plasma and urine (stored under different storage conditions) from CRC patients using the AVENIO Expanded Kit

  Dataset EGAD50000001588

• Tagomics Ltd

  The Tagomics Ltd Data Access Committee manages controlled access to datasets generated by Tagomics Ltd. The DAC evaluates applications to ensure that proposed research complies with participant consent, ethical approvals, and institutional policies.

  Dac EGAC50000000727

• cfDNA shallow Whole-Genome sequencing - pilot run

  cfDNA shallow Whole-Genome sequencing from 30 patients with mTNBC in the TONIC trial, including 2 timepoints: baseline and week 12.

  Dataset EGAD50000001861