Matched_Pair_Cancer_Cell_line_Whole_Genomes - EGA European Genome-Phenome Archive

Study

Matched Pair Cancer Cell line Whole Genomes

Study ID	Alternative Stable ID	Type
EGAS00001000160		Cancer Genomics

Study Description

We propose to definitively characterise the somatic genetics of 29 matched pair cell lines through generation of comprehensive catalogues of somatic mutations by high coverage genome sequencing.

Study Datasets 3 datasets.

Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data

Dataset ID	Description	Technology	Samples
EGAD00001000145	Matched Pair Cancer Cell line Whole Genomes Matched Pair Cancer Cell line Whole Genomes	Illumina HiSeq 2000	58
EGAD00001000638	Insertion of processed pseudogenes is known to occur in the germline but has not previously been observed in somatic cells. Formation of pseudogenes could represent a new class of mutation in cancers and a new source of potential driver events. Insertion of processed pseudogenes is known to occur in the germline but has not previously been observed in somatic cells. Formation of pseudogenes could represent a new class of mutation in cancers and a new source of potential driver events.	Illumina HiSeq 2000	20
EGAD00001001349	Frequent somatic transfer of mitochondrial DNA into the nuclear genome of human cancer cells Frequent somatic transfer of mitochondrial DNA into the nuclear genome of human cancer cells	Illumina HiSeq 2000	4

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