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Dataset

Somatic pseudogenes acquired during cancer development – Whole Genome sequencing

Dataset ID	Technology	Samples
EGAD00001000638	Illumina HiSeq 2000	20

Dataset Description

Insertion of processed pseudogenes is known to occur in the germline but has not previously been observed in somatic cells. Formation of pseudogenes could represent a new class of mutation in cancers and a new source of potential driver events.

Data Use Conditions

IS PUB US

See further information on Data Use Conditions

Label	Code	Version
general research use	DUO:0000042	2021-02-23
institution specific restriction	DUO:0000028	2021-02-23
publication required	DUO:0000019	2021-02-23
user specific restriction	DUO:0000026	2021-02-23

Who controls access to this dataset

For each dataset that requires controlled access, there is a corresponding Data Access Committee (DAC) who determine access permissions. Access to actual data files is not managed by the EGA. If you need to request access to this data set, please contact:

WTSI CGP Data access committee
Contact person: Data Sharing
Email: datasharing [at] sanger [dot] ac [dot] uk
Access information: https://edam.sanger.ac.uk/
More details: EGAC00001000000

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This dataset is featured in 4 studies

Studies are experimental investigations of a particular phenomenon. e.g. case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients. Click on one of the Study IDs below to find out more.

Study ID	Study Title	Study Type
EGAS00001000005	Lung Rearrangement Study	Cancer Genomics
EGAS00001000037	Gastric and Esophageal tumour rearrangement screen	Cancer Genomics
EGAS00001000148	Lung Cancer Whole Genomes	Cancer Genomics
EGAS00001000160	Matched Pair Cancer Cell line Whole Genomes	Cancer Genomics

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