Study
Genetic landscape of pediatric Infant Acute Lymphoblastic leukemia
Study ID | Alternative Stable ID | Type |
---|---|---|
EGAS00001000246 | Whole Genome Sequencing |
Study Description
We performed whole genome sequencing of tumor and normal DNA samples obtained from 22 infant ALL cases with MLL rearrangements. In addition, we sequenced 2 paired diagnostic-relapse samples. Using complementary pipelines, somatically acquired genetic changes were analyzed, including single nucleotide variations (SNVs), insertion/deletions, structural variations and copy number variations in the cancer genomes. In addition, exome sequencing was performed on paired diagnostic and normal DNA samples obtained from 20 cases of non-infant MLL rearranged leukemias and somatic mutations in the coding regions were identified.
Study Datasets 6 datasets.
Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data
Dataset ID | Description | Technology | Samples |
---|---|---|---|
EGAD00001000165 |
DATA FILES FOR SJINF
|
Illumina HiSeq 2000 | 46 |
EGAD00001001098 |
DATA FILES FOR SJINF RNASeq
|
Illumina HiSeq 2000 | 63 |
EGAD00001001245 |
DATA FILES FOR PCGP SJINF WES
|
Illumina HiSeq 2000 | 40 |
EGAD00001001432 |
PCGP Germline Study Whole Genome Sequencing
|
Illumina HiSeq 2000 | 1337 |
EGAD00001001433 |
PCGP Germline Study Whole Exome Sequencing
|
Illumina HiSeq 2000 | 906 |
EGAD00010000698 |
PCGP INF ALL SNP6
|
N/A |
Who archives the data?

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