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DATA FILES FOR PCGP SJINF WES

DATA FILES FOR PCGP SJINF WES

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DUO:0000042
version: 2019-01-07

general research use

This data use permission indicates that use is allowed for general research use for any research purpose.

DAC to obtain datasets submitted by St. Jude Children's Research Hospital - Washington University Pediatric Cancer Genome Project

Learn more about the PCGP, disease types, publications, the PCGP Data Access Committee, and instructions to access data via EGA: https://pecan.stjude.cloud/permalink/pcgp Complete the attached Data Access Agreement (DAA), adhering to the following guidance, and return it to pcgpdaccoordinator@stjude.org: - Requests must be made for individual datasets (EGAD ID), not full studies (EGAS ID). - A separate DAA must be submitted for each dataset AND all original pages must be included. - The first listed applicant should be the Principal Investigator, Head of Department, or Department Chair leading the project. This should not be a staff scientist or postdoctoral researcher. - The email address used to access the dataset(s) must be a work-related email, not a personal email. - The signature of the “Institutional or Administrative Authority” must be an individual with the authority to sign documents on behalf of the requesting institution. This individual is known as the Authorized Organizational Representative (AOR) and is typically someone in the requesting institution's legal department or grants office. Heads/Chairs of Departments cannot sign as the Institutional or Administrative Authority. - Not adhering to these policies will delay your application. Once we receive your completed application, the DAC review typically takes approximately 15-20 business days. - If we do not receive a completed DAA from you within 90 days, we will consider this application closed and reject your request in the EGA portal. You may resubmit later as needed.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001000246 Whole Genome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
EGAF00000764867 bam 4.7 GB Report
EGAF00000764868 bam 5.0 GB Report
EGAF00000764869 bam 4.2 GB Report
EGAF00000764870 bam 4.3 GB Report
EGAF00000764871 bam 4.3 GB Report
EGAF00000764872 bam 4.3 GB Report
EGAF00000764873 bam 5.9 GB Report
EGAF00000764874 bam 5.9 GB Report
EGAF00000764875 bam 3.5 GB Report
EGAF00000764876 bam 6.2 GB Report
EGAF00000764877 bam 6.2 GB Report
EGAF00000764878 bam 5.7 GB Report
EGAF00000764879 bam 5.7 GB Report
EGAF00000764880 bam 5.8 GB Report
EGAF00000764881 bam 4.5 GB Report
EGAF00000764882 bam 4.4 GB Report
EGAF00000764883 bam 6.0 GB Report
EGAF00000764884 bam 5.9 GB Report
EGAF00000764885 bam 5.6 GB Report
EGAF00000764892 bam 5.4 GB Report
EGAF00000764893 bam 6.6 GB Report
EGAF00000764894 bam 6.6 GB Report
EGAF00000764895 bam 6.8 GB Report
EGAF00000764896 bam 5.5 GB Report
EGAF00000764897 bam 12.7 GB Report
EGAF00000764898 bam 12.9 GB Report
EGAF00000764899 bam 16.0 GB Report
EGAF00000764900 bam 12.2 GB Report
EGAF00000764901 bam 13.0 GB Report
EGAF00000764902 bam 13.6 GB Report
EGAF00000764903 bam 16.2 GB Report
EGAF00000764904 bam 13.2 GB Report
EGAF00000764905 bam 12.7 GB Report
EGAF00000764906 bam 14.2 GB Report
EGAF00000764907 bam 12.3 GB Report
EGAF00000764908 bam 20.1 GB Report
EGAF00000764909 bam 7.1 GB Report
EGAF00000764910 bam 12.5 GB Report
EGAF00000764911 bam 13.7 GB Report
EGAF00000764914 bam 11.8 GB Report
EGAF00000764915 bam 22.1 GB Report
EGAF00000764916 bam 20.5 GB Report
EGAF00000764917 bam 27.5 GB Report
EGAF00000764918 bam 21.5 GB Report
EGAF00000764919 bam 22.9 GB Report
EGAF00000764920 bam 20.7 GB Report
EGAF00000764921 bam 25.1 GB Report
EGAF00000764922 bam 23.1 GB Report
EGAF00000764923 bam 23.0 GB Report
EGAF00000764924 bam 24.8 GB Report
EGAF00000764925 bam 24.6 GB Report
EGAF00000764926 bam 21.3 GB Report
EGAF00000764927 bam 26.0 GB Report
53 Files (646.3 GB)