Study

ICGC Benchmarking Exercise

Study ID Alternative Stable ID Type
EGAS00001000433 Whole Genome Sequencing

Study Description

The main objective of this benchmark is the comparison of the full sequencing pipeline of different ICGC partners, including procedures, methods and performance of library preparation and whole-genome deep-sequencing. A secondary objective will be a follow-up comparison of data analysis pipelines for identification of germline and somatic variants subsequent to the results of the ICGC Somatic Variant Calling Pipeline Benchmark.

Study Datasets 1 dataset.

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Dataset ID Description Technology Samples
EGAD00001000625
The main objective of this benchmark is the comparison of the full sequencing pipeline of different ICGC partners, including procedures, methods and performance of library preparation and whole-genome deep-sequencing. A secondary objective will be a follow-up comparison of data analysis pipelines for identification of germline and somatic variants subsequent to the results of the ICGC Somatic Variant Calling Pipeline Benchmark.
Illumina HiSeq 2000 2

Who archives the data?

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