ICGC Oesophageal adenocarcinoma - pilot samples
The oesophageal project will focus on adenocarcinoma which is increasing in incidence in the UK and other developed countries and has a very poor outcome. The primary aims of this project are to deeply sequence tumour and normal genomic DNA (including the precursor condition Barrett's oesophagus when material is available) to provide a comprehensive catalogue of somatic mutations. This will be achieved through a UK-wide network of hospitals involved in a research collaboration called the OCCAMS consortium. The goal of this project is to use high quality clinical material with accurately annotated clinic-pathological, treatment and outcome data.
- Type: Other
- Archiver: EGA European Genome-Phenome Archive
Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data
| Dataset ID | Description | Technology | Samples |
|---|---|---|---|
| EGAD00001000704 | Illumina HiSeq 2000 | - | |
| EGAD00001001048 | Illumina HiSeq 2000 | - | |
| EGAD00001001071 | Illumina HiSeq 2000 | 10 | |
| EGAD00001001457 | Illumina HiSeq 2000 | 24 | |
| EGAD00001001960 | Illumina HiSeq 2000 | - | |
| EGAD00001002218 | Illumina HiSeq 2000 | 10 | |
| EGAD00001002241 | Illumina HiSeq 2000 | 6 | |
| EGAD00001003292 | Illumina HiSeq 2000 | 34 | |
| EGAD00001003580 | Illumina HiSeq 2000 | 38 | |
| EGAD00001004137 | Illumina HiSeq 2000 | - | |
| EGAD00001004417 | Illumina HiSeq 2000 | - | |
| EGAD00001004775 | Illumina HiSeq 2000 | - | |
| EGAD00001007785 | HiSeq X Five Illumina HiSeq 2000 Illumina NovaSeq 6000 | - | |
| EGAD00001011196 | HiSeq X Five Illumina HiSeq 2000 Illumina NovaSeq 6000 unspecified | 6 |