Study

Diverse modes of genomic alterations in hepatocellular carcinoma

Study ID Alternative Stable ID Type
EGAS00001000824 Other

Study Description

Hepatocellular carcinoma is the most prevalent type of liver cancer. We intended to study the genomic landscape of this disease. We conducted whole-genome, exome and transcriptome sequencing for 42 patients. We show diverse modes in which the HCC genome is affected in these patients, including well-known and novel mutations, structural variations, and Hepatitis B-virus integration into the genome.

Study Datasets 3 datasets.

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Dataset ID Description Technology Samples
EGAD00001000885
Exome read sequences for 30 tumor-normal pairs for the study "Diverse modes of genomic alterations in Hepatocellular Carcinoma".
Illumina HiSeq 2000 60
EGAD00001000886
RNA-Sequencing data (raw read sequences) for 23 samples, from 12 patients, for the study "Diverse modes of genomic alterations in Hepatocellular Carcinoma"
Illumina HiSeq 2000 23
EGAD00001001034
Whole genome data (Complete genomics platform) for the study EGAS00001000824
24

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