Genome-wide identification of distinct miRNA-mRNA target regulation pairs in Non-Hodgkin lymphomas: a report from the ICGC MMML-Seq consortium
|Study ID||Alternative Stable ID||Type|
Study Datasets 6 datasets.
Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data
PAR-CLIP was performed on the Argonaute-2 protein (AGO2) in four lymphoma cell lines:NamalwaRajiSU-DHL-4SU-DHL-6
|Illumina HiSeq 2500||4|
After overexpression and knockdown of both described novel miRs nmiR-1 and nmiR-2 in BL cell lines (SU-DHL4 for nmiR-1 and Raji for nmiR-2), we performed regular RNA-Seq (including Mock controls for all cell lines) to identify their direct and indirect downstream mRNA targets.
|Illumina HiSeq 2500||16|
miRNA seq data of 43 cases out of dataset EGAD00001000650 (MMML)
miRNA seq data of 13 cases (MMML)
Part of RNA sequencing data of Malignant Lymphoma Study (ICGC)
|Illumina HiSeq 2000||56|
Part of WGS seq data of Maligant Lymphoma study (ICGC)
|Illumina HiSeq 2000,Illumina HiSeq 2500||112|