Study

Breast Cancer PDTX Encyclopaedia

Study ID Alternative Stable ID Type
EGAS00001001913 Other

Study Description

Molecular data from the collection of PDTX breast cancer models described in Bruna et al, 2016. Cell. It includes whole exome sequencing, shallow whole genome sequencing, expression arrays and reduced bisulfite representation sequencing (RRBS).

Study Datasets 3 datasets.

Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data

Dataset ID Description Technology Samples
EGAD00001002685
Breast cancer PDTX sequencing data from Bruna et al, Cell 2016 - Exome Sequencing - Shallow Whole Genome Sequencing - RRBS Methylation Sequencing
Illumina HiSeq 2500 393
EGAD00001006307
RNA-SEQ for the Caldas Lab breast cancer PDTX collection. This includes both single and paired end runs
Illumina HiSeq 4000 117
EGAD00010001032
RNA Expression using Illumina HT12 v3
Illlumina HT12 v3 153

Who archives the data?

Publications

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