Study

Melanoma brain metastases

Study ID Alternative Stable ID Type
EGAS00001002107 Cancer Genomics

Study Description

This is a whole exome study of brain metastases in melanoma. We are studying the genomic evolution of primary cutaneous melanoma to brain met in patients with brain-only metastatic disease. We are also looking at the genomic heterogeneity in patients with temporally, anatomically and regionally separated brian metastases.

Study Datasets 5 datasets.

Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data

Dataset ID Description Technology Samples
EGAD00001005981
These are the raw sequencing files for the 50 brain tumour, 3 extracranial tumour and 34 matched normals for the patients in the discovery cohort.
Illumina HiSeq 4000 87
EGAD00001005982
These are the variant calls for the 50 brain tumour samples in the discovery cohort.
Illumina HiSeq 4000 50
EGAD00001005983
These are the Sequenza copy number calls for the 30 brain tumour samples within the discovery cohort.
Illumina HiSeq 4000 30
EGAD00001005984
Raw sequencing files for the 18 (brain tumour-only) samples within the external validation cohort.
Illumina HiSeq 4000 18
EGAD00001005985
These are the raw sequencing files for the orthogonal validation brain tumour samples in the discovery cohort.
Illumina HiSeq 4000 31

Who archives the data?

There are no publications available