Study

Oncogenic gene fusions in primary colon cancers

Study ID Alternative Stable ID Type
EGAS00001002197 Other

Study Description

This study represents RNA-sequencing data from 278 primary colon cancers obtained from fresh-frozen tumor sections. The project goal was to identify novel oncogenic gene fusions in these data. In addition, we studied the detected gene fusions at the molecular level and defined their effects on downstream pathways.

Study Datasets 1 dataset.

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Dataset ID Description Technology Samples
EGAD00001003291
This dataset represents RNA-sequencing data from 278 primary colon cancers obtained from fresh-frozen tumor sections. RNA-sequencing was performed using TruSeq library preparation and samples were sequenced on Illumina NextSeq and HiSeq. The data are available as Illumina NextSeq and HiSeq fastq files (_R1.fastq and _R2.fastq for each tumor sample, 556 files in total).
Illumina HiSeq 2500,NextSeq 500 278

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