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Dataset

oncogenic gene fusions in primary colon cancers

Dataset ID	Technology	Samples
EGAD00001003291	Illumina HiSeq 2500,NextSeq 500	278

Dataset Description

This dataset represents RNA-sequencing data from 278 primary colon cancers obtained from fresh-frozen tumor sections. RNA-sequencing was performed using TruSeq library preparation and samples were sequenced on Illumina NextSeq and HiSeq. The data are available as Illumina NextSeq and HiSeq fastq files (_R1.fastq and _R2.fastq for each tumor sample, 556 files in total).

Data Use Conditions

NPU

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Label	Code	Version	Modifier
general research use	DUO:0000042	2021-02-23
not for profit, non commercial use only	DUO:0000018	2021-02-23

Who controls access to this dataset

For each dataset that requires controlled access, there is a corresponding Data Access Committee (DAC) who determine access permissions. Access to actual data files is not managed by the EGA. If you need to request access to this data set, please contact:

Division of Biomedical Genetics UMC Utrecht
Contact person: DAC DBG
Email: dacdbg [at] umcutrecht [dot] nl
Access information: http://ubec.nl/data-access-committee/
More details: EGAC00001000432

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This dataset is featured in 1 study

Studies are experimental investigations of a particular phenomenon. e.g. case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients. Click on one of the Study IDs below to find out more.

Study ID	Study Title	Study Type
EGAS00001002197	Oncogenic gene fusions in primary colon cancers	Other

EGA Beacon