Exploiting immune cell receptor information to quantify index switching in single cell transcriptome sequencing experiment
|Study ID||Alternative Stable ID||Type|
Study Datasets 1 dataset.
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Smart-seq2 protocol was used to perform single cell RNA-sequencing on 465 immune cells. The immune cells analysed include 215 HLA-DQ2: gluten-(DQ2.5-glia-α1, -α2, -ω1, and -ω2) tetramer-sorted T cells, 247 transglutaminase 2 (TG2)-positive plasma cells from intestinal biopsy or peripheral blood from celiac disease patients, and 3 unassigned cells in 3 batches.
|Illumina HiSeq 4000||1|