Whole exome sequencing CYLD cutaneous syndrome

Study ID Alternative Stable ID Type
EGAS00001003839 Other

Study Description

Patients with CYLD cutaneous syndrome (CCS; syn. Brooke-Spiegler syndrome) carry germline mutations in the tumor suppressor CYLD and develop multiple skin tumors with diverse histophenotypes. We comprehensively profiled the genomic landscape of 42 benign and malignant tumors across 13 individuals from four multigenerational families. Novel recurrent mutations were found in epigenetic modifiers DNMT3A and BCOR in 29% of benign tumors. Multi-level and microdissected sampling strikingly reveal that many clones with different DNMT3A mutations exist in these benign tumors, suggesting that intra-tumor heterogeneity is common. Integrated genomic, methylation and transcriptomic profiling in selected tumours suggest that isoform specific DNMT3A2 mutations are associated with dysregulated Wnt/ß-catenin pathway signaling. Phylogenetic and mutational signature analyses confirm cylindroma pulmonary metastases from primary skin tumours. These findings add novel dimensions to existing paradigms of cutaneous tumorigenesis and metastasis.

Study Datasets 1 dataset.

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Dataset ID Description Technology Samples
This dataset contains genomic and transcriptomic profiling of skin samples (74) from patients with CYLD cutaneous syndrome
Illumina HiSeq 2500,Illumina MiSeq,Illumina NovaSeq 6000 69

Who archives the data?

There are no publications available