About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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The mutational landscape of skin tumours in CYLD cutaneous syndrome

This dataset contains genomic and transcriptomic profiling of skin samples (74) from patients with CYLD cutaneous syndrome

Request Access

This policy has been reviewed by the legal services department at Newcastle University

DATA ACCESS AGREEMENT These terms and conditions govern access to the managed access datasets (details of which are set out in Appendix I) to which the User Institution has requested access. The User Institution agrees to be bound by these terms and conditions. Definitions Authorised Personnel: The individuals at the User Institution to whom NEWCASTLE UNIVERSITY grants access to the Data. This includes the User, the individuals listed in Appendix II and any other individuals for whom the User Institution subsequently requests access to the Data. Details of the initial Authorised Personnel are set out in Appendix II. Data: The managed access datasets to which the User Institution has requested access. Data Producers: NEWCASTLE UNIVERSITY and the collaborators listed in Appendix I responsible for the development, organisation, and oversight of these Data. External Collaborator: A collaborator of the User, working for an institution other than the User Institution. Project: The project for which the User Institution has requested access to these Data. A description of the Project is set out in Appendix II. Publications: Includes, without limitation, articles published in print journals, electronic journals, reviews, books, posters and other written and verbal presentations of research. Research Participant: An individual whose data form part of these Data. Research Purposes: Shall mean research that is seeking to advance the understanding of genetics and genomics, including the treatment of disorders, and work on statistical methods that may be applied to such research. User: The principal investigator for the Project. User Institution(s): The Institution that has requested access to the Data. NEWCASTLE UNIVERSITY: Your Institution details here 1. The User Institution agrees to only use these Data for the purpose of the Project (described in Appendix II) and only for Research Purposes. The User Institution further agrees that it will only use these Data for Research Purposes which are within the limitations (if any) set out in Appendix I. 2. The User Institution agrees to preserve, at all times, the confidentiality of these Data. In particular, it undertakes not to use, or attempt to use these Data to compromise or otherwise infringe the confidentiality of information on Research Participants. Without prejudice to the generality of the foregoing, the User Institution agrees to use at least the measures set out in Appendix I to protect these Data. 3. The User Institution agrees to protect the confidentiality of Research Participants in any research papers or publications that they prepare by taking all reasonable care to limit the possibility of identification. 4. The User Institution agrees not to link or combine these Data to other information or archived data available in a way that could re-identify the Research Participants, even if access to that data has been formally granted to the User Institution or is freely available without restriction. 5. The User Institution agrees only to transfer or disclose these Data, in whole or part, or any material derived from these Data, to the Authorised Personnel. Should the User Institution wish to share these Data with an External Collaborator, the External Collaborator must complete a separate application for access to these Data. 6. The User Institution agrees that the Data Producers, and all other parties involved in the creation, funding or protection of these Data: a) make no warranty or representation, express or implied as to the accuracy, quality or comprehensiveness of these Data; b) exclude to the fullest extent permitted by law all liability for actions, claims, proceedings, demands, losses (including but not limited to loss of profit), costs, awards damages and payments made by the Recipient that may arise (whether directly or indirectly) in any way whatsoever from the Recipient’s use of these Data or from the unavailability of, or break in access to, these Data for whatever reason and; c) bear no responsibility for the further analysis or interpretation of these Data. 7. The User Institution agrees to follow the Fort Lauderdale Guidelines (http://www.wellcome.ac.uk/stellent/groups/corporatesite/@policy_communications/documents/web_document/wtd003207.pdf ) and the Toronto Statement (http://www.nature.com/nature/journal/v461/n7261/full/461168a.html). This includes but is not limited to recognising the contribution of the Data Producers and including a proper acknowledgement in all reports or publications resulting from the use of these Data. 8. The User Institution agrees to follow the Publication Policy in Appendix III. This includes respecting the moratorium period for the Data Producers to publish the first peer-reviewed report describing and analysing these Data. 9. The User Institution agrees not to make intellectual property claims on these Data and not to use intellectual property protection in ways that would prevent or block access to, or use of, any element of these Data, or conclusion drawn directly from these Data. 10. The User Institution can elect to perform further research that would add intellectual and resource capital to these data and decide to obtain intellectual property rights on these downstream discoveries. In this case, the User Institution agrees to implement licensing policies that will not obstruct further research and to follow the U.S. National Institutes of Health Best Practices for the Licensing of Genomic Inventions (2005) (https://www.icgc.org/files/daco/NIH_BestPracticesLicensingGenomicInventions_2005_en.pdf ) in conformity with the Organisation for Economic Co-operation and Development Guidelines for the Licensing of the Genetic Inventions (2006) (http://www.oecd.org/science/biotech/36198812.pdf ). 11. The User Institution agrees to destroy/discard the Data held, once it is no longer used for the Project, unless obliged to retain the data for archival purposes in conformity with audit or legal requirements. 12. The User Institution will notify NEWCASTLE UNIVERSITY within 30 days of any changes or departures of Authorised Personnel. 13. The User Institution will notify NEWCASTLE UNIVERSITY prior to any significant changes to the protocol for the Project. 14. The User Institution will notify NEWCASTLE UNIVERSITY as soon as it becomes aware of a breach of the terms or conditions of this agreement. 15. NEWCASTLE UNIVERSITY may terminate this agreement by written notice to the User Institution. If this agreement terminates for any reason, the User Institution will be required to destroy any Data held, including copies and backup copies. This clause does not prevent the User Institution from retaining these data for archival purpose in conformity with audit or legal requirements. 16. The User Institution accepts that it may be necessary for the Data Producers to alter the terms of this agreement from time to time. As an example, this may include specific provisions relating to the Data required by Data Producers other than NEWCASTLE UNIVERSITY. In the event that changes are required, the Data Producers or their appointed agent will contact the User Institution to inform it of the changes and the User Institution may elect to accept the changes or terminate the agreement. 17. If requested, the User Institution will allow data security and management documentation to be inspected to verify that it is complying with the terms of this agreement. 18. The User Institution agrees to distribute a copy of these terms to the Authorised Personnel. The User Institution will procure that the Authorised Personnel comply with the terms of this agreement. 19. This agreement (and any dispute, controversy, proceedings or claim of whatever nature arising out of this agreement or its formation) shall be construed, interpreted and governed by the laws of England and Wales and shall be subject to the exclusive jurisdiction of the English courts.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001003839 Other
EGAS00001003840 Other
EGAS00001003841 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00002558382 fastq.gz 2.4 GB Report
EGAF00002558383 fastq.gz 2.4 GB Report
EGAF00002558384 fastq.gz 3.7 GB Report
EGAF00002558385 fastq.gz 3.8 GB Report
EGAF00002558386 fastq.gz 2.9 GB Report
EGAF00002558387 fastq.gz 3.0 GB Report
EGAF00002558388 fastq.gz 2.4 GB Report
EGAF00002558389 fastq.gz 2.5 GB Report
EGAF00002558390 fastq.gz 3.1 GB Report
EGAF00002558391 fastq.gz 3.2 GB Report
EGAF00002558392 fastq.gz 3.0 GB Report
EGAF00002558393 fastq.gz 3.1 GB Report
EGAF00002558394 fastq.gz 3.4 GB Report
EGAF00002558395 fastq.gz 3.5 GB Report
EGAF00002558396 fastq.gz 3.1 GB Report
EGAF00002558397 fastq.gz 3.3 GB Report
EGAF00002558398 fastq.gz 3.3 GB Report
EGAF00002558399 fastq.gz 3.3 GB Report
EGAF00002558400 fastq.gz 2.0 GB Report
EGAF00002558401 fastq.gz 2.1 GB Report
EGAF00002558402 fastq.gz 3.0 GB Report
EGAF00002558403 fastq.gz 3.0 GB Report
EGAF00002558404 fastq.gz 3.0 GB Report
EGAF00002558405 fastq.gz 3.2 GB Report
EGAF00002558406 fastq.gz 1.7 GB Report
EGAF00002558407 fastq.gz 1.7 GB Report
EGAF00002558408 fastq.gz 2.7 GB Report
EGAF00002558409 fastq.gz 2.9 GB Report
EGAF00002558410 fastq.gz 273.9 MB Report
EGAF00002558411 fastq.gz 301.2 MB Report
EGAF00002558412 fastq.gz 236.7 MB Report
EGAF00002558413 fastq.gz 261.6 MB Report
EGAF00002558414 fastq.gz 305.7 MB Report
EGAF00002558415 fastq.gz 337.3 MB Report
EGAF00002558416 fastq.gz 299.8 MB Report
EGAF00002558417 fastq.gz 331.7 MB Report
EGAF00002558418 fastq.gz 239.3 MB Report
EGAF00002558419 fastq.gz 263.8 MB Report
EGAF00002558420 fastq.gz 320.1 MB Report
EGAF00002558421 fastq.gz 353.0 MB Report
EGAF00002558422 fastq.gz 139.3 MB Report
EGAF00002558423 fastq.gz 154.9 MB Report
EGAF00002558424 fastq.gz 213.8 MB Report
EGAF00002558425 fastq.gz 234.8 MB Report
EGAF00002558426 fastq.gz 198.6 MB Report
EGAF00002558427 fastq.gz 219.7 MB Report
EGAF00002558428 fastq.gz 155.1 MB Report
EGAF00002558429 fastq.gz 171.8 MB Report
EGAF00002558430 fastq.gz 231.9 MB Report
EGAF00002558431 fastq.gz 255.2 MB Report
EGAF00002558432 fastq.gz 141.9 MB Report
EGAF00002558433 fastq.gz 155.8 MB Report
EGAF00002558434 fastq.gz 185.5 MB Report
EGAF00002558435 fastq.gz 203.5 MB Report
EGAF00002558436 fastq.gz 150.8 MB Report
EGAF00002558437 fastq.gz 165.3 MB Report
EGAF00002558438 fastq.gz 222.7 MB Report
EGAF00002558439 fastq.gz 243.3 MB Report
EGAF00002558440 fastq.gz 251.7 MB Report
EGAF00002558441 fastq.gz 275.7 MB Report
EGAF00002558442 fastq.gz 155.5 MB Report
EGAF00002558443 fastq.gz 172.4 MB Report
EGAF00002558444 fastq.gz 158.1 MB Report
EGAF00002558445 fastq.gz 175.2 MB Report
EGAF00002558446 fastq.gz 326.9 MB Report
EGAF00002558447 fastq.gz 362.4 MB Report
EGAF00002558448 fastq.gz 217.2 MB Report
EGAF00002558449 fastq.gz 240.3 MB Report
EGAF00002558450 fastq.gz 166.3 MB Report
EGAF00002558451 fastq.gz 184.3 MB Report
EGAF00002558452 fastq.gz 159.6 MB Report
EGAF00002558453 fastq.gz 175.3 MB Report
EGAF00002558454 fastq.gz 139.2 MB Report
EGAF00002558455 fastq.gz 152.6 MB Report
EGAF00002558456 bam 2.2 GB Report
EGAF00002558457 bam 1.1 GB Report
EGAF00002558458 bam 1.1 GB Report
EGAF00002558459 bam 1.3 GB Report
EGAF00002558460 bam 1.4 GB Report
EGAF00002558461 bam 1.4 GB Report
EGAF00002558462 bam 1.6 GB Report
EGAF00002558463 fastq.gz 3.4 GB Report
EGAF00002558464 fastq.gz 3.4 GB Report
EGAF00002558465 fastq.gz 3.1 GB Report
EGAF00002558466 fastq.gz 3.2 GB Report
EGAF00002558467 fastq.gz 2.2 GB Report
EGAF00002558468 fastq.gz 2.2 GB Report
EGAF00002558469 fastq.gz 2.7 GB Report
EGAF00002558470 fastq.gz 2.8 GB Report
EGAF00002558471 fastq.gz 2.9 GB Report
EGAF00002558472 fastq.gz 3.0 GB Report
EGAF00002558473 fastq.gz 2.1 GB Report
EGAF00002558474 fastq.gz 2.1 GB Report
EGAF00002558475 fastq.gz 3.2 GB Report
EGAF00002558476 fastq.gz 3.3 GB Report
EGAF00002558477 fastq.gz 2.4 GB Report
EGAF00002558478 fastq.gz 2.4 GB Report
EGAF00002558479 fastq.gz 9.6 GB Report
EGAF00002558480 fastq.gz 9.9 GB Report
EGAF00002558481 fastq.gz 3.0 GB Report
EGAF00002558482 fastq.gz 3.1 GB Report
EGAF00002558483 fastq.gz 2.0 GB Report
EGAF00002558484 fastq.gz 2.1 GB Report
EGAF00002558485 fastq.gz 2.7 GB Report
EGAF00002558486 fastq.gz 2.8 GB Report
EGAF00002558487 fastq.gz 2.8 GB Report
EGAF00002558488 fastq.gz 2.8 GB Report
EGAF00002558489 fastq.gz 2.5 GB Report
EGAF00002558490 fastq.gz 2.6 GB Report
EGAF00002558491 fastq.gz 2.8 GB Report
EGAF00002558492 fastq.gz 3.0 GB Report
EGAF00002558493 fastq.gz 2.3 GB Report
EGAF00002558494 fastq.gz 2.4 GB Report
EGAF00002558495 fastq.gz 2.7 GB Report
EGAF00002558496 fastq.gz 2.7 GB Report
EGAF00002558497 fastq.gz 2.8 GB Report
EGAF00002558498 fastq.gz 2.9 GB Report
EGAF00002558499 fastq.gz 2.9 GB Report
EGAF00002558500 fastq.gz 2.9 GB Report
EGAF00002558501 fastq.gz 2.5 GB Report
EGAF00002558502 fastq.gz 2.6 GB Report
EGAF00002558503 fastq.gz 3.1 GB Report
EGAF00002558504 fastq.gz 3.2 GB Report
EGAF00002558505 fastq.gz 2.6 GB Report
EGAF00002558506 fastq.gz 2.6 GB Report
EGAF00002558507 fastq.gz 2.4 GB Report
EGAF00002558508 fastq.gz 2.4 GB Report
EGAF00002558509 fastq.gz 3.7 GB Report
EGAF00002558510 fastq.gz 3.8 GB Report
EGAF00002558511 fastq.gz 2.9 GB Report
EGAF00002558512 fastq.gz 3.0 GB Report
EGAF00002558513 fastq.gz 2.4 GB Report
EGAF00002558514 fastq.gz 2.5 GB Report
EGAF00002558515 fastq.gz 3.1 GB Report
EGAF00002558516 fastq.gz 3.2 GB Report
EGAF00002558517 fastq.gz 3.0 GB Report
EGAF00002558518 fastq.gz 3.1 GB Report
EGAF00002558519 fastq.gz 3.4 GB Report
EGAF00002558520 fastq.gz 3.5 GB Report
EGAF00002558521 fastq.gz 3.1 GB Report
EGAF00002558522 fastq.gz 3.2 GB Report
EGAF00002558523 fastq.gz 3.3 GB Report
EGAF00002558524 fastq.gz 3.3 GB Report
EGAF00002558525 fastq.gz 2.1 GB Report
EGAF00002558526 fastq.gz 2.1 GB Report
EGAF00002558527 fastq.gz 3.0 GB Report
EGAF00002558528 fastq.gz 3.0 GB Report
EGAF00002558529 fastq.gz 3.0 GB Report
EGAF00002558530 fastq.gz 3.2 GB Report
EGAF00002558531 fastq.gz 1.7 GB Report
EGAF00002558532 fastq.gz 1.7 GB Report
EGAF00002558533 fastq.gz 2.7 GB Report
EGAF00002558534 fastq.gz 2.9 GB Report
EGAF00002558535 fastq.gz 757.6 MB Report
EGAF00002558536 fastq.gz 780.2 MB Report
EGAF00002558537 fastq.gz 2.5 GB Report
EGAF00002558538 fastq.gz 2.6 GB Report
EGAF00002558539 fastq.gz 2.6 GB Report
EGAF00002558540 fastq.gz 2.7 GB Report
EGAF00002558541 fastq.gz 2.2 GB Report
EGAF00002558542 fastq.gz 2.2 GB Report
EGAF00002558543 fastq.gz 3.0 GB Report
EGAF00002558544 fastq.gz 3.1 GB Report
EGAF00002558545 fastq.gz 1.2 GB Report
EGAF00002558546 fastq.gz 1.2 GB Report
EGAF00002558547 fastq.gz 3.3 GB Report
EGAF00002558548 fastq.gz 3.3 GB Report
EGAF00002558549 fastq.gz 3.1 GB Report
EGAF00002558550 fastq.gz 3.2 GB Report
EGAF00002558551 fastq.gz 2.2 GB Report
EGAF00002558552 fastq.gz 2.2 GB Report
EGAF00002558553 fastq.gz 2.7 GB Report
EGAF00002558554 fastq.gz 2.8 GB Report
EGAF00002558555 fastq.gz 2.9 GB Report
EGAF00002558556 fastq.gz 2.9 GB Report
EGAF00002558557 fastq.gz 2.1 GB Report
EGAF00002558558 fastq.gz 2.1 GB Report
EGAF00002558559 fastq.gz 3.2 GB Report
EGAF00002558560 fastq.gz 3.3 GB Report
EGAF00002558561 fastq.gz 2.4 GB Report
EGAF00002558562 fastq.gz 2.4 GB Report
EGAF00002558563 fastq.gz 9.5 GB Report
EGAF00002558564 fastq.gz 9.8 GB Report
EGAF00002558565 fastq.gz 3.0 GB Report
EGAF00002558566 fastq.gz 3.1 GB Report
EGAF00002558567 fastq.gz 2.0 GB Report
EGAF00002558568 fastq.gz 2.1 GB Report
EGAF00002558569 fastq.gz 2.7 GB Report
EGAF00002558570 fastq.gz 2.8 GB Report
EGAF00002558571 fastq.gz 2.7 GB Report
EGAF00002558572 fastq.gz 2.8 GB Report
EGAF00002558573 fastq.gz 2.5 GB Report
EGAF00002558574 fastq.gz 2.6 GB Report
EGAF00002558575 fastq.gz 2.9 GB Report
EGAF00002558576 fastq.gz 3.0 GB Report
EGAF00002558577 fastq.gz 2.3 GB Report
EGAF00002558578 fastq.gz 2.3 GB Report
EGAF00002558579 fastq.gz 2.7 GB Report
EGAF00002558580 fastq.gz 2.7 GB Report
EGAF00002558581 fastq.gz 2.8 GB Report
EGAF00002558582 fastq.gz 2.9 GB Report
EGAF00002558583 fastq.gz 2.9 GB Report
EGAF00002558584 fastq.gz 2.9 GB Report
EGAF00002558585 fastq.gz 2.4 GB Report
EGAF00002558586 fastq.gz 2.5 GB Report
EGAF00002558587 fastq.gz 3.1 GB Report
EGAF00002558588 fastq.gz 3.2 GB Report
EGAF00002558589 fastq.gz 2.6 GB Report
EGAF00002558590 fastq.gz 2.6 GB Report
EGAF00002558591 fastq.gz 742.4 MB Report
EGAF00002558592 fastq.gz 763.9 MB Report
EGAF00002558593 fastq.gz 2.5 GB Report
EGAF00002558594 fastq.gz 2.6 GB Report
EGAF00002558595 fastq.gz 2.6 GB Report
EGAF00002558596 fastq.gz 2.7 GB Report
EGAF00002558597 fastq.gz 2.2 GB Report
EGAF00002558598 fastq.gz 2.2 GB Report
EGAF00002558599 fastq.gz 3.0 GB Report
EGAF00002558600 fastq.gz 3.1 GB Report
EGAF00002558601 fastq.gz 1.2 GB Report
EGAF00002558602 fastq.gz 1.2 GB Report
EGAF00002558603 fastq.gz 206.0 MB Report
EGAF00002558604 fastq.gz 227.7 MB Report
EGAF00002558605 fastq.gz 5.3 GB Report
EGAF00002558606 fastq.gz 5.3 GB Report
EGAF00002558607 fastq.gz 5.4 GB Report
EGAF00002558608 fastq.gz 5.3 GB Report
EGAF00002558609 fastq.gz 6.5 GB Report
EGAF00002558610 fastq.gz 6.6 GB Report
EGAF00002558611 fastq.gz 5.6 GB Report
EGAF00002558612 fastq.gz 5.7 GB Report
EGAF00002558613 fastq.gz 5.6 GB Report
EGAF00002558614 fastq.gz 5.6 GB Report
EGAF00002558615 fastq.gz 5.1 GB Report
EGAF00002558616 fastq.gz 5.1 GB Report
EGAF00002558617 fastq.gz 4.7 GB Report
EGAF00002558618 fastq.gz 4.7 GB Report
EGAF00002558619 fastq.gz 5.3 GB Report
EGAF00002558620 fastq.gz 5.3 GB Report
EGAF00002558621 fastq.gz 4.5 GB Report
EGAF00002558622 fastq.gz 4.4 GB Report
EGAF00002558623 fastq.gz 5.0 GB Report
EGAF00002558624 fastq.gz 5.0 GB Report
EGAF00002558625 fastq.gz 5.0 GB Report
EGAF00002558626 fastq.gz 5.0 GB Report
EGAF00002558627 fastq.gz 5.9 GB Report
EGAF00002558628 fastq.gz 5.8 GB Report
EGAF00002558629 fastq.gz 6.1 GB Report
EGAF00002558630 fastq.gz 6.1 GB Report
EGAF00002558631 fastq.gz 6.7 GB Report
EGAF00002558632 fastq.gz 6.6 GB Report
EGAF00002558633 fastq.gz 4.8 GB Report
EGAF00002558634 fastq.gz 4.8 GB Report
EGAF00002558635 fastq.gz 6.5 GB Report
EGAF00002558636 fastq.gz 6.5 GB Report
EGAF00002558637 fastq.gz 5.7 GB Report
EGAF00002558638 fastq.gz 5.6 GB Report
EGAF00002558639 fastq.gz 4.9 GB Report
EGAF00002558640 fastq.gz 4.9 GB Report
EGAF00002558641 fastq.gz 4.4 GB Report
EGAF00002558642 fastq.gz 4.4 GB Report
261 Files (704.4 GB)