MutationalPatterns2: The one stop shop for the analysis of mutational processes: DNA repair deletions

Study ID Alternative Stable ID Type
EGAS00001004789 Whole Genome Sequencing

Study Description

Study Datasets 1 dataset.

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Dataset ID Description Technology Samples
We generated HPRT-only knockout lines as well as the combination of HPRT with MSH2, UNG and XPC. Whole genome sequencing was performed on generated clones and subclones. By subtracting variants present in the clones from those in the subclones, the somatic mutations, that accumulated in between the clonal steps, were determined.
HiSeq X Ten,Illumina NovaSeq 6000 11

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