Comparison of capture-based method for transcriptome profiling of formalin-fixed paraffin embedded tumor samples
|Study ID||Alternative Stable ID||Type|
Study Datasets 1 dataset.
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This dataset includes all FASTQ files for 11 samples where different capture-based methods for transcriptome profiling have been tested. Specifically, we have the 'traditional' RNA-seq experiment with fresh frozen (FF) material, and 3 different capture methods for the matching formalin-fixed paraffin-embedded samples: Agilent (AGI), IDT, and Twist Biosciences (TBS). In total, there are 43 samples with paired-end FASTQ files (1 sample did not have sufficient material to test all methods). ... (Show More)
|Illumina HiSeq 2500,Illumina HiSeq 4000||43|