Developing somatic copy number and mutation calling tools for a bespoke sequencing platform

Study ID Alternative Stable ID Type
EGAS00001007195 Other

Study Description

We previously developed a linked-read sequencing platform (DigiPico) for analysing whole cancer genomes from picogram quantities of tumour DNA. The aim of this study was to develop and evaluate the specialised computational approaches required to obtain clinically useful results from the raw data. To this end, we performed matched DigiPico, bulk tumour and germline WGS on samples from four patients.

Study Datasets 1 dataset.

Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data

Dataset ID Description Technology Samples
Bulk tumour, germline and DigiPico WGS BAM files from patients 11611, 11615, 11619
Illumina HiSeq 4000 8

Who archives the data?

There are no publications available