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scRNAseq data from HNSCC biopsies before and after BA treatment

Tumor biopsies from 6 head and neck small cell carcinoma (HNSCC) berfore and 3-weeks after bintrafusp-alfa (BA) treatment were analyzed using single-cell RNA sequencing.

Type: RNASeq
Archive: European Genome-phenome Archive (EGA)

1 Dataset

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Dataset ID	Description	Technology	Samples
EGAD50000003043	Tumor biopsies from 6 head and neck small cell carcinoma (HNSCC) berfore and 3-weeks after bintrafusp-alfa treatment were analyzed using single-cell RNA sequencing (droplet-based 3' 10x genomics). Library were sequenced using the Chromium plateform. Generated fastq files were processed using cellranger to generat the count matrices.	Illumina NovaSeq X Plus	12