DAC

Molecular Oncology Group, PICR

Dac ID Contact Person Email Access Information
EGAC00001000095 Richard Marais rmarais [at] picr [dot] man [dot] ac [dot] uk

This DAC controls 9 datasets:

Dataset ID Description Technology Samples
EGAD00010000468 Uveal melanoma matched Tumour and blood samples Illumina HumanOmni2.5 24
EGAD00001000372 We conducted whole genome sequencing and DNA SNP array of 12 uveal melanoma genomes and their matched DNA from blood. We also conducted RNA-seq of the 12 tumour samples. Illumina HiSeq 2000; 24
EGAD00001001260 Illumina HiSeq 2000; 2
EGAD00001001258 Illumina HiSeq 2000; 5
EGAD00001001259 Illumina HiSeq 2000; 2
EGAD00001001257 Illumina HiSeq 2000; 3
EGAD00001000775 Whole exome sequencing of 41 melanomas and normal DNA from Braf mutant mice: 15 tumours from UV exposed mice, 15 tumours from non-exposed mice and 11 from UV exposed, sunscreen-protected mice. Illumina HiSeq 2000; 80
EGAD00001000945 NGS of 10 mucosal melanomas: Whole genome sequencing of 5 mucosal melanomas and matched normal DNA Whole exome sequencing of 5 mucosal melanomas and matched normal DNA Illumina HiSeq 2000; 20
EGAD00001003120 We used WGS (Complete Genomics) to characterise five metastatic tumours from a BRAF mutant melanoma patient who presented intrinsic resistance. Complete Genomics;COMPLETE_GENOMICS 6