DAC
Molecular Oncology Group, PICR
| Dac ID | Contact Person | Access Information | |
|---|---|---|---|
| EGAC00001000095 | Richard Marais | richard [dot] marais [at] manchester [dot] ac [dot] uk | No additional information is available |
This DAC controls 14 datasets:
| Dataset ID | Description | Technology | Samples |
|---|---|---|---|
| EGAD00001000372 | We conducted whole genome sequencing and DNA SNP array of 12 uveal melanoma genomes and their matched DNA from blood. We also conducted RNA-seq of the 12 tumour samples. | Illumina HiSeq 2000 | 24 |
| EGAD00001000775 | Whole exome sequencing of 41 melanomas and normal DNA from Braf mutant mice: 15 tumours from UV exposed mice, 15 tumours from non-exposed mice and 11 from UV exposed, sunscreen-protected mice. | Illumina HiSeq 2000 | 80 |
| EGAD00001000944 | Whole Genome Sequencing of 5 acral melanomas and matched normal samples | Illumina HiSeq 2000 | 10 |
| EGAD00001000945 | NGS of 10 mucosal melanomas:Whole genome sequencing of 5 mucosal melanomas and matched normal DNAWhole exome sequencing of 5 mucosal melanomas and matched normal DNA | Illumina HiSeq 2000 | 20 |
| EGAD00001001257 | NA | Illumina HiSeq 2000 | 3 |
| EGAD00001001258 | NA | Illumina HiSeq 2000 | 5 |
| EGAD00001001259 | NA | Illumina HiSeq 2000 | 2 |
| EGAD00001001260 | NA | Illumina HiSeq 2000 | 2 |
| EGAD00001003120 | We used WGS (Complete Genomics) to characterise five metastatic tumours from a BRAF mutant melanoma patient who presented intrinsic resistance. | Complete Genomics | 6 |
| EGAD00001004466 | Low pass WGS: 48 samples (5 blood samples from 6 patient data): 22 Tumour cores and 26 normal/benign cores (Next Seq ) | NextSeq 500 | 48 |
| EGAD00001004467 | WES: 48 samples (5 blood samples from 6 patient data): 22 Tumour cores and 26 normal/benign cores (HiSeq) | Illumina HiSeq 2500 | 48 |
| EGAD00001004468 | Total RNA Seq: 15 Samples (2 patients (MF1 and MF3)) (HiSeq) and Poly A RNA Seq: 27 Samples (4 patients Normal and Tumour ) (HiSeq) | Illumina HiSeq 2500 | 42 |
| EGAD00001006568 | This dataset contains 20 whole genome sequences from 10 tumor-normal pairs from conjunctival melanomas. | 20 | |
| EGAD00010000468 | Uveal melanoma matched Tumour and blood samples | Illumina HumanOmni2.5 | 24 |
