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Uveal melanoma whole genome sequencing, SNP arrays and RNA-seq

We conducted whole genome sequencing and DNA SNP array of 12 uveal melanoma genomes and their matched DNA from blood. We also conducted RNA-seq of the 12 tumour samples.

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PICR Cancer Research UK Genomics Initiative Policy

To whom it may concern,This document refers to the data sets EGAS00001000472, EGAS00001000474 and EGAS00001000486 which have been submitted to the European Genome Archive (EGA) for the restricted access by legitimate academic institutions that have agreed to comply with the terms of a Data Access Agreement drafted by the Cancer Research UK Genomics Initiative.There are a number of steps that a researcher must take to obtain access to these data and the process is overseen by our Data Access Committee, called Molecular Oncology Group, PICR, headed by Richard Marais ( who is authorized to approve researchers to have encrypted access to the data submitted to the EGA.Please be advised that Simon Furney ( is authorized to upload data to the EGA for archiving and distribution as part of your submission process, which will enable approved researchers to have encrypted access to the data. We can confirm that this submission is consistent with the informed consent of the participants of the study or has been granted ethical approval and is in accordance with the applicable laws and regulations.Yours sincerely, Richard Marais, PhD, FMedSciProfessor of Molecular OncologyDirector, The Paterson Institute for Cancer Research

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001000472 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00000170045 bam 115.1 GB
EGAF00000170046 bam 103.7 GB
EGAF00000170047 bam 106.6 GB
EGAF00000170048 bam 94.8 GB
EGAF00000170049 bam 105.9 GB
EGAF00000170050 bam 103.9 GB
EGAF00000170051 bam 107.2 GB
EGAF00000170052 bam 103.0 GB
EGAF00000170053 bam 110.0 GB
EGAF00000170054 bam 112.2 GB
EGAF00000170055 bam 117.4 GB
EGAF00000170056 bam 101.4 GB
EGAF00000170057 bam 106.8 GB
EGAF00000170058 bam 115.2 GB
EGAF00000170059 bam 114.9 GB
EGAF00000170060 bam 110.5 GB
EGAF00000170061 bam 108.1 GB
EGAF00000170062 bam 110.7 GB
EGAF00000170063 bam 108.7 GB
EGAF00000170064 bam 109.1 GB
EGAF00000170065 bam 108.8 GB
EGAF00000170066 bam 111.0 GB
EGAF00000170067 bam 105.1 GB
EGAF00000170068 bam 103.1 GB
EGAF00000171369 bam 4.6 GB
EGAF00000171370 bam 5.7 GB
EGAF00000171371 bam 7.4 GB
EGAF00000171372 bam 6.3 GB
EGAF00000171373 bam 1.0 GB
EGAF00000171374 bam 3.8 GB
EGAF00000171375 bam 1.6 GB
EGAF00000171376 bam 1.4 GB
EGAF00000171377 bam 1.1 GB
EGAF00000171378 bam 1.1 GB
EGAF00000171379 bam 2.0 GB
EGAF00000171380 bam 950.2 MB
EGAF00000171381 bam 3.6 GB
EGAF00000171382 bam 4.4 GB
EGAF00000171383 bam 7.8 GB
39 Files (2.6 TB)