DAC
Ludwig Center for Cancer Genetics and Therapeutics at Johns Hopkins
Dac ID | Contact Person | Access Information | |
---|---|---|---|
EGAC00001000507 | Ken Kinzler | kinzlke [at] jhmi [dot] edu | No additional information is available |
This DAC controls 10 datasets:
Dataset ID | Description | Technology | Samples |
---|---|---|---|
EGAD00001002263 | This is the first dataset for the Botseq sequencing project | Illumina HiSeq 2000,Illumina HiSeq 2500 | 39 |
EGAD00001003323 | Runs that contain data for the sensitivity and specificity experiments for BiSeqS. | Illumina MiSeq | 2 |
EGAD00001003579 | Samples prepared using Safe-SeqS technology. All samples ran on an Illumina MiSeq instrument. Fastq files for read 1 and the index read present (R and I respectively). | Illumina MiSeq | 49 |
EGAD00001003931 | Sequencing data from 1,005 cancer patients and 812 healthy controls. All samples prepared using Safe-SeqS technology and sequenced on an Illumina MiSeq and/or HiSeq instrument. Paired FASTQ files for correspond to read 1 and the index read present (R and I respectively). | Illumina HiSeq 4000 | 212 |
EGAD00001003958 | Whole exome sequencing data for 18 mucoepidermoid carcinoma samples. The samples were used for Illumina TruSeq library construction and captured using Agilent V4 exome panel. The PE fastq files are provided. | Illumina HiSeq 2000 | 18 |
EGAD00001003959 | Whole genome sequencing data for 25 adenoid cystic carcinoma samples. The samples were used for Illumina TruSeq library construction and were sequenced on an Illumina HiSeq 2000. The PE fastq files are provided. | Illumina HiSeq 2000 | 25 |
EGAD00001004355 | This dataset consists on 22 samples linked to 22 bam files from whole genome and whole exome sequencing of Esthioneuroblastomas. | Illumina HiSeq 2500 | 22 |
EGAD00001004399 | ctDNA and protein markers for earlier detection of pancreatic cancers | Illumina HiSeq 4000 | 14 |
EGAD00001004946 | Whole exome sequencing data for 18 mucoepidermoid carcinoma samples. The samples were used for Illumina TruSeq library construction and captured using Agilent V4 exome panel. The PE fastq files are provided. | Illumina HiSeq 2000 | 18 |
EGAD00001004964 | Whole exome sequencing data for matched normal and endometriosis samples. Samples were prepared using Agilent Sureselect capture kit, and sequenced on an Illumina HiSeq 2500. The submitted files are in BAM format. | Illumina HiSeq 2500 | 50 |