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Genentech DevSci DAC

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DevSci DAC d-list
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This DAC controls 12 datasets

Dataset ID	Description	Technology	Samples
EGAD00001008815	Meta-data/patient information for the bulk RNAseq data		1
EGAD00001008816	Bulk RNAseq of sigmoid colon biopsies from healthy volunteers and ulcerative colitis patients. Subjects were treated with Placebo or IL-22Fc at different doses, and biopsies were collected at day 0 and day 30 post treatment and prepared for RNA sequencing.	Illumina NovaSeq 6000	83
EGAD00001008817	Fecal WMS data from NCT02749630 ulcerative colitis patients. Stool samples were collected at screening as well as on day 64 and prepared for whole metagenomic sequencing.	Illumina HiSeq 4000	93
EGAD00001008818	Fecal 16S-V4 rRNA gene sequence data from NCT02749630 ulcerative colitis patients. Stool samples were collected at screening as well as on days 29, 43, 64, 85, and 134 processed for 16SV4 rRNA gene sequencing	Illumina MiSeq	192
EGAD00001008819	Metadata for fecal WMS data from NCT02749630 healthy volunteers.		1
EGAD00001008820	Metadata for fecal WMS data from NCT02749630 ulcerative colitis patients.		1
EGAD00001008821	Metadata for fecal 16S-V4 rRNA gene sequence data from NCT02749630 healthy volunteers.		1
EGAD00001008822	Metadata for fecal 16S-V4 rRNA gene sequence data from NCT02749630 ulcerative colitis patients.		1
EGAD00001008823	Metadata for 16S-V4 rRNA gene sequence data for intestinal biopsies from NCT02749630 trial participants.		1
EGAD00001008840	Fecal 16S-V4 rRNA gene sequence data from NCT02749630 healthy volunteers. Stool samples were collected at screening as well as on days 29, 43, 64, 85, and 134 processed for 16SV4 rRNA gene sequencing	Illumina MiSeq	206
EGAD00001008841	Fecal WMS data from NCT02749630 healthy volunteers. Stool samples were collected at screening as well as on days 29, 43, and 64 and prepared for whole metagenomic sequencing.	Illumina HiSeq 4000	53
EGAD00001008843	16S-V4 rRNA gene sequence data for intestinal biopsies from NCT02749630 trial participants. Biopsies from patients were collected at screening, day 30, and day 85 and prepared for 16SV4 rRNA gene sequencing.	Illumina MiSeq	132