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Fecal WMS HV sequencing data

Fecal WMS data from NCT02749630 healthy volunteers. Stool samples were collected at screening as well as on days 29, 43, and 64 and prepared for whole metagenomic sequencing.

Request Access

DUO:0000015
version: 2021-02-23

no general methods research

This data use modifier indicates that use does not allow methods development research (e.g., development of software or algorithms).

DUO:0000025
version: 2021-02-23

time limit on use

This data use modifier indicates that use is approved for a specific number of months.

DUO:0000026
version: 2021-02-23

user specific restriction

This data use modifier indicates that use is limited to use by approved users.

DUO:0000027
version: 2021-02-23

project specific restriction

This data use modifier indicates that use is limited to use within an approved project.

DUO:0000028
version: 2021-02-23

institution specific restriction

This data use modifier indicates that use is limited to use within an approved institution.

Genentech Data Access Agreement for Academic Institutions

GENENTECH DATA ACCESS COMMITTEE DATA ACCESS AGREEMENT This Data Access Agreement (“Agreement”) between Genentech, Inc. (“Genentech”) and User andUser Institution (as defined below) governs the terms on which access will be granted to thegenotype data obtained from Genentech. In signing this Agreement, User and User Institution agree to be bound by the terms and conditions of access set out in this Agreement. For the sake of clarity, the terms of access set out in this Agreement shall govern activities conducted by the User and the User Institution (as defined below). User Institution and User are referred to within the Agreement as “You” and “Your” for convenience only. Definitions: gRED means Genentech Research and Early Development. Data means all and any human genetic data generated by gRED and requested by User through submission of an Application for Access to Genotype Data and obtained from Genentech under the terms of this Agreement. Data Subject means a person, who has been informed of the purpose for which the Data is held and has given his/her informed consent thereto. User means a researcher who has requested Data by submitting an Application for Access to Genotype Data to gRED and whose User Institution has previously completed this Data Access Agreement with respect to such Data and has received acknowledgement of its acceptance. Publications means, without limitation, articles published in print journals, electronic journals, reviews, books, posters and other written and verbal presentations of research. User Institution means the organization at which the User is employed, affiliated or enrolled. Genentech Data Access Committee means members of the gRED organization that are responsible for making the data access decisions for the genotype data generated by gRED. Terms and Conditions: In signing this Agreement: 1. You agree to use the Data only for the advancement of medical research. 2. You agree not to use the data for the creation of products for sale or for any commercial purpose. 3. You agree to preserve, at all times, the confidentiality of Data pertaining to Data Subjects. In particular, You undertake not to use, or attempt to use the Data to compromise or otherwise infringe the confidentiality of information on Data Subjects and their right to privacy.DSC: Academic Data Access Agreement vMar2021 1 4. You agree not to attempt to link the Data provided under this Agreement to any other data source on the same samples or to link the Data to any person or otherwise identify any Data Subject from the Data. 5. You agree not to transfer or disclose the Data, in whole or part, or any identifiable material derived from the Data, to others, except as necessary for data/safety monitoring or programmanagement. Should You wish to share the Data with a collaborator outside the same Institution, the third party must make a separate application for access to the Data. 6. You agree to use the Data for the approved purpose and project described in your Application for Access to Raw Exome Sequencing and/or RNA Sequencing Data; use of the Data for a new purpose or project will require a new application and approval. You agree to restrict your use of the Data to the analysis of somatic mutations and/or gene expression level only; use of these data to infer genotype is not permitted. 7. You agree that publication of Your purpose, project, and results is restricted for a one (1) year period starting from the publication date of the Genentech publication referencing the Data deposit. You will be free to publish the results of the research using the Data for the approved purpose after the one (1) year period has expired. You will not publish the Data, but will refer to the original Data deposit by Genentech and agree to acknowledge in any such publication that the research makes use of Data generated by Genentech. 8. You accept that Genentech: (a) bears no legal responsibility for the accuracy or comprehensiveness of the Data; and (b) accepts no liability for indirect, consequential, or incidental, damages or losses arising from use of the Data, or from the unavailability of, or break in access to, the Data for whatever reason. 9. You understand and acknowledge that the Data is protected by copyright and other intellectual property rights, and that duplication, except as reasonably required to carry out Your research with the Data, or sale of all or part of the Data on any media is not permitted. 10. You recognize that nothing in this Agreement shall operate to transfer to the User Institution any intellectual property rights relating to the Data. 11. You agree that You will submit a report to the Genentech Data Access Committee, if requested, on completion of the approved purpose. The Genentech Data Access Committee agrees to treat the report and all information, data, results, and conclusions contained within such report as confidential information belonging to the User Institution. 12. (a) You agree to use the Data in accordance with all applicable laws, including but not limited to applicable data privacy laws. (b)The Genentech Data Access Committee reserves the right to request and inspect data security and management documentation to ensure the adequacy of data protection measures. 13. This Agreement shall be effective as of the date of the last party to sign below (“Effective Date”) and shall terminate three (3) years after the Effective Date, unless terminated sooner pursuant to Section 14 below. Upon termination, You will be required to destroy any Data held. 14. You accept that this Agreement will terminate immediately upon any breach of this Agreement by You. Either party may terminate this Agreement upon thirty (30) days written notice for any reason. The following Sections of this Agreement shall survive its expiration or termination:DSC: Academic Data Access Agreement vMar2021 2 Sections 1 – 10, 12(a), and 14-17 15. Nothing herein shall create any association, partnership, joint venture, fiduciary duty or the relation of principal and agent between the parties hereto, it being understood that each party is acting as an independent contractor, and neither party shall have the authority to bind the other or the other’s representatives in any way. 16. Except as required by law or permitted under Section 7, neither party shall use or refer to this Agreement in the public media, or use the names or marks of the other party without express prior written permission. 17. This Agreement may be executed by the parties hereto in separate counterparts, each of which when so executed and delivered shall be deemed an original, but all such counterparts shall together constitute one and the same agreement. The parties agree that execution of this Agreement by exchanging facsimile, PDF, or e-Signature (as defined below) signatures shall have the same legal force and effect as the exchange of original signatures. Pursuant to this Agreement, e-Signatures shall mean a signature that consists of one or more letters, characters, numbers or other symbols in digital form incorporated in, attached to or associated with the electronic document, that (a) is unique to the person making the signature; (b) the technology or process used to make the signature is under the sole control of the person making the signature; (b) the technology or process can be used to identify the person using the technology or process; and (d) the electronic signature can be linked with an electronic document in such a way that it can be used to determine whether the electronic document has been changed since the electronic signature was incorporated in, attached to or associated with the electronic document. The written form shall be required to make changes to this clause as well. IN WITNESS WHEREOF, the parties have caused this Agreement to be executed by their respective duly authorized representatives as set forth below. Genentech, Inc. For and on behalf of User Institution: (Institutional or Administrative Authority) Signature: Signature: Print Name: Print Name: Title: Title: Date: Date: Read and acknowledged by User/Applicant: Signature: Print Name: Title: Date:DSC: Academic Data Access Agreement vMar2021 3

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001006172 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
EGAF00006172408 fastq.bz2 1.1 GB Report
EGAF00006172409 fastq.bz2 1.1 GB Report
EGAF00006172410 fastq.bz2 835.5 MB Report
EGAF00006172411 fastq.bz2 861.4 MB Report
EGAF00006172412 fastq.bz2 1.1 GB Report
EGAF00006172413 fastq.bz2 1.1 GB Report
EGAF00006172414 fastq.bz2 1.2 GB Report
EGAF00006172415 fastq.bz2 1.2 GB Report
EGAF00006172416 fastq.bz2 1.0 GB Report
EGAF00006172417 fastq.bz2 1.0 GB Report
EGAF00006172418 fastq.bz2 1.1 GB Report
EGAF00006172419 fastq.bz2 1.2 GB Report
EGAF00006172420 fastq.bz2 1.1 GB Report
EGAF00006172421 fastq.bz2 1.1 GB Report
EGAF00006172422 fastq.bz2 1.1 GB Report
EGAF00006172423 fastq.bz2 1.2 GB Report
EGAF00006172424 fastq.bz2 1.1 GB Report
EGAF00006172425 fastq.bz2 1.1 GB Report
EGAF00006172426 fastq.bz2 1.2 GB Report
EGAF00006172427 fastq.bz2 1.2 GB Report
EGAF00006172428 fastq.bz2 1.3 GB Report
EGAF00006172429 fastq.bz2 1.3 GB Report
EGAF00006172430 fastq.bz2 1.0 GB Report
EGAF00006172431 fastq.bz2 997.2 MB Report
EGAF00006172432 fastq.bz2 1.0 GB Report
EGAF00006172433 fastq.bz2 1.0 GB Report
EGAF00006172434 fastq.bz2 919.3 MB Report
EGAF00006172435 fastq.bz2 918.0 MB Report
EGAF00006172436 fastq.bz2 955.9 MB Report
EGAF00006172437 fastq.bz2 964.7 MB Report
EGAF00006172438 fastq.bz2 893.0 MB Report
EGAF00006172439 fastq.bz2 903.5 MB Report
EGAF00006172440 fastq.bz2 1.0 GB Report
EGAF00006172441 fastq.bz2 1.1 GB Report
EGAF00006172442 fastq.bz2 973.9 MB Report
EGAF00006172443 fastq.bz2 982.8 MB Report
EGAF00006172444 fastq.bz2 1.1 GB Report
EGAF00006172445 fastq.bz2 1.0 GB Report
EGAF00006172446 fastq.bz2 993.1 MB Report
EGAF00006172447 fastq.bz2 1.0 GB Report
EGAF00006172448 fastq.bz2 1.0 GB Report
EGAF00006172449 fastq.bz2 1.0 GB Report
EGAF00006172450 fastq.bz2 937.4 MB Report
EGAF00006172451 fastq.bz2 951.4 MB Report
EGAF00006172452 fastq.bz2 1.1 GB Report
EGAF00006172453 fastq.bz2 1.1 GB Report
EGAF00006172454 fastq.bz2 970.1 MB Report
EGAF00006172455 fastq.bz2 1.0 GB Report
EGAF00006172456 fastq.bz2 1.0 GB Report
EGAF00006172457 fastq.bz2 1.0 GB Report
EGAF00006172458 fastq.bz2 957.4 MB Report
EGAF00006172459 fastq.bz2 979.8 MB Report
EGAF00006172460 fastq.bz2 1.0 GB Report
EGAF00006172461 fastq.bz2 1.0 GB Report
EGAF00006172462 fastq.bz2 1.2 GB Report
EGAF00006172463 fastq.bz2 1.2 GB Report
EGAF00006172464 fastq.bz2 951.2 MB Report
EGAF00006172465 fastq.bz2 967.3 MB Report
EGAF00006172466 fastq.bz2 1.0 GB Report
EGAF00006172467 fastq.bz2 1.0 GB Report
EGAF00006172468 fastq.bz2 946.4 MB Report
EGAF00006172469 fastq.bz2 951.3 MB Report
EGAF00006172470 fastq.bz2 958.4 MB Report
EGAF00006172471 fastq.bz2 954.0 MB Report
EGAF00006172472 fastq.bz2 997.5 MB Report
EGAF00006172473 fastq.bz2 991.8 MB Report
EGAF00006172474 fastq.bz2 874.1 MB Report
EGAF00006172475 fastq.bz2 893.7 MB Report
EGAF00006172476 fastq.bz2 1.4 GB Report
EGAF00006172477 fastq.bz2 1.4 GB Report
EGAF00006172478 fastq.bz2 871.2 MB Report
EGAF00006172479 fastq.bz2 885.2 MB Report
EGAF00006172480 fastq.bz2 1.1 GB Report
EGAF00006172481 fastq.bz2 1.1 GB Report
EGAF00006172482 fastq.bz2 836.7 MB Report
EGAF00006172483 fastq.bz2 845.1 MB Report
EGAF00006172484 fastq.bz2 946.9 MB Report
EGAF00006172485 fastq.bz2 933.7 MB Report
EGAF00006172486 fastq.bz2 949.8 MB Report
EGAF00006172487 fastq.bz2 957.8 MB Report
EGAF00006172488 fastq.bz2 1.1 GB Report
EGAF00006172489 fastq.bz2 1.1 GB Report
EGAF00006172490 fastq.bz2 949.8 MB Report
EGAF00006172491 fastq.bz2 957.0 MB Report
EGAF00006172492 fastq.bz2 989.6 MB Report
EGAF00006172493 fastq.bz2 983.6 MB Report
EGAF00006172494 fastq.bz2 1.0 GB Report
EGAF00006172495 fastq.bz2 1.1 GB Report
EGAF00006172496 fastq.bz2 1.1 GB Report
EGAF00006172497 fastq.bz2 1.1 GB Report
EGAF00006172498 fastq.bz2 962.8 MB Report
EGAF00006172499 fastq.bz2 947.5 MB Report
EGAF00006172500 fastq.bz2 909.5 MB Report
EGAF00006172501 fastq.bz2 945.2 MB Report
EGAF00006172502 fastq.bz2 1.1 GB Report
EGAF00006172503 fastq.bz2 1.0 GB Report
EGAF00006172504 fastq.bz2 1.0 GB Report
EGAF00006172505 fastq.bz2 1.1 GB Report
EGAF00006172506 fastq.bz2 927.1 MB Report
EGAF00006172507 fastq.bz2 928.5 MB Report
EGAF00006172508 fastq.bz2 1.0 GB Report
EGAF00006172509 fastq.bz2 1.1 GB Report
EGAF00006172510 fastq.bz2 1.0 GB Report
EGAF00006172511 fastq.bz2 988.6 MB Report
EGAF00006172512 fastq.bz2 1.1 GB Report
EGAF00006172513 fastq.bz2 1.1 GB Report
EGAF00006172514 fastq.bz2 1.0 GB Report
EGAF00006172515 fastq.bz2 1.0 GB Report
EGAF00006172516 fastq.bz2 1.1 GB Report
EGAF00006172517 fastq.bz2 1.1 GB Report
EGAF00006172518 fastq.bz2 910.1 MB Report
EGAF00006172519 fastq.bz2 898.2 MB Report
EGAF00006172520 fastq.bz2 1.2 GB Report
EGAF00006172521 fastq.bz2 1.2 GB Report
EGAF00006172522 fastq.bz2 958.2 MB Report
EGAF00006172523 fastq.bz2 964.2 MB Report
EGAF00006172524 fastq.bz2 1.0 GB Report
EGAF00006172525 fastq.bz2 1.0 GB Report
EGAF00006172526 fastq.bz2 1.1 GB Report
EGAF00006172527 fastq.bz2 1.1 GB Report
EGAF00006172528 fastq.bz2 900.6 MB Report
EGAF00006172529 fastq.bz2 891.8 MB Report
EGAF00006172530 fastq.bz2 952.6 MB Report
EGAF00006172531 fastq.bz2 942.3 MB Report
EGAF00006172532 fastq.bz2 1.0 GB Report
EGAF00006172533 fastq.bz2 1.0 GB Report
EGAF00006172534 fastq.bz2 992.4 MB Report
EGAF00006172535 fastq.bz2 996.0 MB Report
EGAF00006172536 fastq.bz2 970.7 MB Report
EGAF00006172537 fastq.bz2 978.5 MB Report
EGAF00006172538 fastq.bz2 1.1 GB Report
EGAF00006172539 fastq.bz2 1.1 GB Report
EGAF00006172540 fastq.bz2 1.1 GB Report
EGAF00006172541 fastq.bz2 1.1 GB Report
EGAF00006172542 fastq.bz2 915.4 MB Report
EGAF00006172543 fastq.bz2 915.7 MB Report
EGAF00006172544 fastq.bz2 1.0 GB Report
EGAF00006172545 fastq.bz2 1.0 GB Report
EGAF00006172546 fastq.bz2 1.1 GB Report
EGAF00006172547 fastq.bz2 1.1 GB Report
EGAF00006172548 fastq.bz2 959.2 MB Report
EGAF00006172549 fastq.bz2 946.8 MB Report
EGAF00006172550 fastq.bz2 1.0 GB Report
EGAF00006172551 fastq.bz2 1.0 GB Report
EGAF00006172552 fastq.bz2 1.1 GB Report
EGAF00006172553 fastq.bz2 972.8 MB Report
EGAF00006172554 fastq.bz2 1.1 GB Report
EGAF00006172555 fastq.bz2 1.1 GB Report
EGAF00006172556 fastq.bz2 1.1 GB Report
EGAF00006172557 fastq.bz2 1.1 GB Report
EGAF00006172558 fastq.bz2 987.7 MB Report
EGAF00006172559 fastq.bz2 994.4 MB Report
EGAF00006172560 fastq.bz2 1.1 GB Report
EGAF00006172561 fastq.bz2 1.1 GB Report
EGAF00006172562 fastq.bz2 1.0 GB Report
EGAF00006172563 fastq.bz2 1.0 GB Report
EGAF00006172564 fastq.bz2 1.0 GB Report
EGAF00006172565 fastq.bz2 1.1 GB Report
158 Files (162.1 GB)